RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 CALM3P0DP25 149 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 SSR1P43307 286 aaKnown RBP10.78□□□□□ -0.68
TRIM23-201ENST00000231524 HOOK3Q86VS8 718 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 LMBR1Q8WVP7 490 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 KAZALD1Q96I82 304 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 OSBPL9Q96SU4 736 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 SEC63Q9UGP8 760 aaKnown RBP10.78□□□□□ -0.68
TRIM23-201ENST00000231524 AXIN2Q9Y2T1 843 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 PTPRUQ92729 1446 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 CD163L1Q9NR16 1453 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 EIF4E1BA6NMX2 242 aaKnown RBP10.78□□□□□ -0.68
TRIM23-201ENST00000231524 KRIT1O00522 736 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 GNAT2P19087 354 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 KIF11P52732 1056 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 RBBP5Q15291 538 aaKnown RBP10.78□□□□□ -0.68
TRIM23-201ENST00000231524 ZKSCAN8Q15776 578 aaPredicted RBP10.78□□□□□ -0.68
TRIM23-201ENST00000231524 ZNF579Q8NAF0 562 aaKnown RBP10.78□□□□□ -0.68
TRIM23-201ENST00000231524 RNPC3Q96LT9 517 aaKnown RBP10.78□□□□□ -0.68
TRIM23-201ENST00000231524 DMGDHQ9UI17 866 aaKnown RBP10.78□□□□□ -0.68
TRIM23-201ENST00000231524 PPLO60437 1756 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 LGALS16A8MUM7 142 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 PSMD14O00487 310 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 ZNF18P17022 549 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 PRCPP42785 496 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 SFMBT2Q5VUG0 894 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 NAA35Q5VZE5 725 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 TRAPPC11Q7Z392 1133 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 LMNTD2Q8IXW0 634 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 CRACR2BQ8N4Y2 399 aaPredicted RBP10.78□□□□□ -0.68
TRIM23-201ENST00000231524 CTNNBL1Q8WYA6 563 aaPredicted RBP10.78□□□□□ -0.68
TRIM23-201ENST00000231524 ZIM3Q96PE6 472 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 TMX4Q9H1E5 349 aaPredicted RBP10.78□□□□□ -0.68
TRIM23-201ENST00000231524 SLC40A1Q9NP59 571 aa10.78□□□□□ -0.68
TRIM23-201ENST00000231524 ANKRD62A6NC57 917 aa10.77□□□□□ -0.68
TRIM23-201ENST00000231524 RGS16O15492 202 aaPredicted RBP10.77□□□□□ -0.68
TRIM23-201ENST00000231524 ITGA6P23229 1130 aa10.77□□□□□ -0.68
TRIM23-201ENST00000231524 BRD2P25440 801 aaKnown RBP10.77□□□□□ -0.68
TRIM23-201ENST00000231524 EZH2Q15910 746 aaKnown RBP10.77□□□□□ -0.68
TRIM23-201ENST00000231524 DDB1Q16531 1140 aa10.77□□□□□ -0.68
TRIM23-201ENST00000231524 CNNM4Q6P4Q7 775 aa10.77□□□□□ -0.68
TRIM23-201ENST00000231524 TMEM139Q8IV31 216 aa10.77□□□□□ -0.68
TRIM23-201ENST00000231524 TEX11Q8IYF3 940 aa10.77□□□□□ -0.68
TRIM23-201ENST00000231524 STMN4Q9H169 189 aaPredicted RBP10.77□□□□□ -0.68
TRIM23-201ENST00000231524 GPR108Q9NPR9 543 aa10.77□□□□□ -0.68
TRIM23-201ENST00000231524 CD2APQ9Y5K6 639 aa10.77□□□□□ -0.68
TRIM23-201ENST00000231524 ABL1P00519 1130 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 ANTXR2P58335 489 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 HDLBPQ00341 1268 aaKnown RBP10.77□□□□□ -0.69
TRIM23-201ENST00000231524 ADAT2Q7Z6V5 191 aaKnown RBP10.77□□□□□ -0.69
TRIM23-201ENST00000231524 RETREG2Q8NC44 543 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 ATP6V1G3Q96LB4 118 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 SLC39A2Q9NP94 309 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 SNX12Q9UMY4 172 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 DUSP10Q9Y6W6 482 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 TNKSO95271 1327 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 A0A1W2PRG0 241 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 MDH1P40925 334 aaKnown RBP10.77□□□□□ -0.69
TRIM23-201ENST00000231524 SATB1Q01826 763 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 SWT1Q5T5J6 900 aaKnown RBP10.77□□□□□ -0.69
TRIM23-201ENST00000231524 SV2BQ7L1I2 683 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 PEX26Q7Z412 305 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 HVCN1Q96D96 273 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 SENP2Q9HC62 589 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 RASAL2Q9UJF2 1139 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 MAGEB6P1A0A0J9YX57 407 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 CD44P16070 742 aaKnown RBP10.77□□□□□ -0.69
TRIM23-201ENST00000231524 BMP6P22004 513 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 VSIG1Q86XK7 387 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 CCDC13Q8IYE1 715 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 WHAMMQ8TF30 809 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 SAAL1Q96ER3 474 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 AGPAT5Q9NUQ2 364 aa10.77□□□□□ -0.69
TRIM23-201ENST00000231524 MTRF1LQ9UGC7 380 aaKnown RBP10.77□□□□□ -0.69
TRIM23-201ENST00000231524 CPS1P31327 1500 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 HIP1RO75146 1068 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 ARMC2Q8NEN0 867 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 TRIM7Q9C029 511 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 YIPF3Q9GZM5 350 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 EHD2Q9NZN4 543 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 DENND2AQ9ULE3 1009 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 ATP8A1Q9Y2Q0 1164 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 FAM205CA6NFA0 338 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 MPHOSPH10O00566 681 aaKnown RBP10.76□□□□□ -0.69
TRIM23-201ENST00000231524 NAPAP54920 295 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 INTS8Q75QN2 995 aaKnown RBP10.76□□□□□ -0.69
TRIM23-201ENST00000231524 ZNF444Q8N0Y2 327 aaPredicted RBP10.76□□□□□ -0.69
TRIM23-201ENST00000231524 MS4A14Q96JA4 679 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 SPATA31D1Q6ZQQ2 1576 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 TMEM110-MUSTN1A8MSY1 372 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 GCFC2P16383 781 aaKnown RBP10.76□□□□□ -0.69
TRIM23-201ENST00000231524 LIFRP42702 1097 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 AARSP49588 968 aaKnown RBP eCLIP10.76□□□□□ -0.69
TRIM23-201ENST00000231524 CARSP49589 748 aaKnown RBP10.76□□□□□ -0.69
TRIM23-201ENST00000231524 DHX9Q08211 1270 aaKnown RBP10.76□□□□□ -0.69
TRIM23-201ENST00000231524 SETDB1Q15047 1291 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 ASIC2Q16515 512 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 DENND2CQ68D51 928 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 CABP7Q86V35 215 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 ANKRD42Q8N9B4 389 aa10.76□□□□□ -0.69
TRIM23-201ENST00000231524 KLHL29Q96CT2 875 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms