RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.14■□□□□ 0.01
HCFC2-201ENST00000229330 FOXP1Q9H334 677 aaPredicted RBP15.14■□□□□ 0.01
HCFC2-201ENST00000229330 GOLPH3LQ9H4A5 285 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 SUDS3Q9H7L9 328 aaPredicted RBP15.14■□□□□ 0.01
HCFC2-201ENST00000229330 CALCRLQ16602 461 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 PARP10Q53GL7 1025 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 ARMC2Q8NEN0 867 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 MAK16Q9BXY0 300 aaKnown RBP15.14■□□□□ 0.01
HCFC2-201ENST00000229330 ROBO2Q9HCK4 1378 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 ATP7BP35670 1465 aa15.14■□□□□ 0.01
HCFC2-201ENST00000229330 NLRP1Q9C000 1473 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 PUM3Q15397 648 aaKnown RBP15.13■□□□□ 0.01
HCFC2-201ENST00000229330 DBN1Q16643 649 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 PARP9Q8IXQ6 854 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 NFU1Q9UMS0 254 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 TSPOAP1O95153 1857 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 KLC4Q9NSK0 619 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 RWDD2AQ9UIY3 292 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 KCNJ6P48051 423 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 PTGDRQ13258 359 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 BIRC2Q13490 618 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 DDX23Q9BUQ8 820 aaKnown RBP15.13■□□□□ 0.01
HCFC2-201ENST00000229330 TYW1Q9NV66 732 aaKnown RBP15.13■□□□□ 0.01
HCFC2-201ENST00000229330 TFCP2L1Q9NZI6 479 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 CDC42BPAQ5VT25 1732 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 NEURL1BA8MQ27 555 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 ZBED6P86452 979 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 TRPC3Q13507 836 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 DIXDC1Q155Q3 683 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 NAA35Q5VZE5 725 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 GRK7Q8WTQ7 553 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 YIPF3Q9GZM5 350 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 ANKRD2Q9GZV1 360 aa15.13■□□□□ 0.01
HCFC2-201ENST00000229330 LONP1P36776 959 aaKnown RBP15.12■□□□□ 0.01
HCFC2-201ENST00000229330 ADCY8P40145 1251 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 ITIH3Q06033 890 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 E4F1Q66K89 784 aaPredicted RBP15.12■□□□□ 0.01
HCFC2-201ENST00000229330 PI4K2BQ8TCG2 481 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 FBXO41Q8TF61 875 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 PGRMC1O00264 195 aaKnown RBP15.12■□□□□ 0.01
HCFC2-201ENST00000229330 CCDC14Q49A88 953 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 GLE1Q53GS7 698 aaKnown RBP15.12■□□□□ 0.01
HCFC2-201ENST00000229330 ZNF658Q5TYW1 1059 aaPredicted RBP15.12■□□□□ 0.01
HCFC2-201ENST00000229330 MSANTD4Q8NCY6 345 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 DAAM1Q9Y4D1 1078 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 PASKQ96RG2 1323 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 PDE8AO60658 829 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 EIF3BP55884 814 aaKnown RBP15.12■□□□□ 0.01
HCFC2-201ENST00000229330 PSMD6Q15008 389 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 SEPT2Q15019 361 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 PLAAQ9Y263 795 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 XRCC5P13010 732 aaKnown RBP15.12■□□□□ 0.01
HCFC2-201ENST00000229330 PHKG2P15735 406 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 PICALMQ13492 652 aa15.12■□□□□ 0.01
HCFC2-201ENST00000229330 FMR1NBQ8N0W7 255 aaPredicted RBP15.12■□□□□ 0.01
HCFC2-201ENST00000229330 DHTKD1Q96HY7 919 aaPredicted RBP15.12■□□□□ 0.01
HCFC2-201ENST00000229330 RNASELQ05823 741 aaKnown RBP15.11■□□□□ 0.01
HCFC2-201ENST00000229330 PPP1R21Q6ZMI0 780 aa15.11■□□□□ 0.01
HCFC2-201ENST00000229330 ZC3H12CQ9C0D7 883 aaKnown RBP15.11■□□□□ 0.01
HCFC2-201ENST00000229330 BRD2P25440 801 aaKnown RBP15.11■□□□□ 0.01
HCFC2-201ENST00000229330 USP14P54578 494 aa15.11■□□□□ 0.01
HCFC2-201ENST00000229330 TRAPPC3LQ5T215 181 aa15.11■□□□□ 0.01
HCFC2-201ENST00000229330 PCDHA13Q9Y5I0 950 aa15.11■□□□□ 0.01
HCFC2-201ENST00000229330 ARHGAP44Q17R89 818 aa15.11■□□□□ 0.01
HCFC2-201ENST00000229330 EEF2KMTQ96G04 330 aa15.11■□□□□ 0.01
HCFC2-201ENST00000229330 WDR24Q96S15 920 aa15.11■□□□□ 0.01
HCFC2-201ENST00000229330 TLR7Q9NYK1 1049 aaKnown RBP15.11■□□□□ 0.01
HCFC2-201ENST00000229330 CCNL1Q9UK58 526 aaPredicted RBP15.11■□□□□ 0.01
HCFC2-201ENST00000229330 ABCC3O15438 1527 aa15.11■□□□□ 0.01
HCFC2-201ENST00000229330 WDR44Q5JSH3 913 aa15.11■□□□□ 0.01
HCFC2-201ENST00000229330 NLRP14Q86W24 1093 aa15.11■□□□□ 0.01
HCFC2-201ENST00000229330 GSPT2Q8IYD1 628 aaKnown RBP15.11■□□□□ 0.01
HCFC2-201ENST00000229330 BLIDQ8IZY5 108 aa15.11■□□□□ 0.01
HCFC2-201ENST00000229330 COG1Q8WTW3 980 aa15.11■□□□□ 0.01
HCFC2-201ENST00000229330 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.11■□□□□ 0.01
HCFC2-201ENST00000229330 ERVV-2B6SEH9 535 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 SRGAP2O75044 1071 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 CYP27A1Q02318 531 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 CUL1Q13616 776 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 ZMYM1Q5SVZ6 1142 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 HVCN1Q96D96 273 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 SPDL1Q96EA4 605 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 PBKQ96KB5 322 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 SH3GL3Q99963 347 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 SLC39A2Q9NP94 309 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 ADGRG1Q9Y653 693 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 MED23Q9ULK4 1368 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 FTCDO95954 541 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 SCYL3Q8IZE3 742 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 THEGQ9P2T0 379 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 TET3O43151 1660 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 GMNCA6NCL1 334 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 SEMA3EO15041 775 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 FBXW10Q5XX13 1052 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 SMC1BQ8NDV3 1235 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 JAG2Q9Y219 1238 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 PLTPP55058 493 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 VSNL1P62760 191 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 KRT31Q15323 416 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 ARHGEF18Q6ZSZ5 1173 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms