RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CHRNDQ07001 517 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 FUT2Q10981 343 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 FAM153CQ494X1 144 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 TCP11X2Q5H9J9 407 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 CCDC13Q8IYE1 715 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 NELFBQ8WX92 580 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 FAM153AQ9UHL3 310 aa15.71■□□□□ 0.11
SF1-201ENST00000227503 KAT6BQ8WYB5 2073 aa15.71■□□□□ 0.1
SF1-201ENST00000227503 CAMTA2O94983 1202 aa15.7■□□□□ 0.1
SF1-201ENST00000227503 PLEKP08567 350 aaPredicted RBP15.7■□□□□ 0.1
SF1-201ENST00000227503 GUCY2FP51841 1108 aa15.7■□□□□ 0.1
SF1-201ENST00000227503 NAP1L1P55209 391 aaKnown RBP15.7■□□□□ 0.1
SF1-201ENST00000227503 CKAP4Q07065 602 aaKnown RBP15.7■□□□□ 0.1
SF1-201ENST00000227503 CAPN6Q9Y6Q1 641 aa15.7■□□□□ 0.1
SF1-201ENST00000227503 ITIH6Q6UXX5 1313 aa15.7■□□□□ 0.1
SF1-201ENST00000227503 MINDY4BA8MYZ0 360 aa15.7■□□□□ 0.1
SF1-201ENST00000227503 GOLGA8KD6RF30 607 aa15.7■□□□□ 0.1
SF1-201ENST00000227503 FSBPO95073 299 aa15.7■□□□□ 0.1
SF1-201ENST00000227503 RPSAP08865 295 aaKnown RBP15.7■□□□□ 0.1
SF1-201ENST00000227503 HPDP32754 393 aaPredicted RBP15.7■□□□□ 0.1
SF1-201ENST00000227503 NF2P35240 595 aa15.7■□□□□ 0.1
SF1-201ENST00000227503 NEDD9Q14511 834 aa15.7■□□□□ 0.1
SF1-201ENST00000227503 ZNF174Q15697 407 aa15.7■□□□□ 0.1
SF1-201ENST00000227503 ZNF473Q8WTR7 871 aaKnown RBP15.7■□□□□ 0.1
SF1-201ENST00000227503 MIEF2Q96C03 454 aa15.7■□□□□ 0.1
SF1-201ENST00000227503 AATFQ9NY61 560 aaKnown RBP eCLIP15.7■□□□□ 0.11e-6■■□□□ 14.4
SF1-201ENST00000227503 LUC7L2Q9Y383 392 aaKnown RBP15.7■□□□□ 0.1
SF1-201ENST00000227503 XDHP47989 1333 aa15.7■□□□□ 0.1
SF1-201ENST00000227503 OPLAHO14841 1288 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 KIF1CO43896 1103 aaKnown RBP15.69■□□□□ 0.1
SF1-201ENST00000227503 NTSR2O95665 410 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 PMS1P54277 932 aaKnown RBP15.69■□□□□ 0.1
SF1-201ENST00000227503 PPP2R5BQ15173 497 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 TRADDQ15628 312 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 CCDC40Q4G0X9 1142 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 ANKRD13CQ8N6S4 541 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 OR8K1Q8NGG5 319 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 ESR2Q92731 530 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 ZNF622Q969S3 477 aaKnown RBP eCLIP15.69■□□□□ 0.17e-8■■□□□ 12
SF1-201ENST00000227503 CCDC43Q96MW1 224 aaKnown RBP15.69■□□□□ 0.1
SF1-201ENST00000227503 PPANQ9NQ55 473 aaKnown RBP15.69■□□□□ 0.1
SF1-201ENST00000227503 CCDC87Q9NVE4 849 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 IQSEC3Q9UPP2 1182 aaPredicted RBP15.69■□□□□ 0.1
SF1-201ENST00000227503 COL4A1P02462 1669 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 PARP10Q53GL7 1025 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 CEP85LQ5SZL2 805 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 CREG2Q8IUH2 290 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 ENAHQ8N8S7 591 aaPredicted RBP15.69■□□□□ 0.1
SF1-201ENST00000227503 IFT81Q8WYA0 676 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 RIOK1Q9BRS2 568 aaKnown RBP15.69■□□□□ 0.1
SF1-201ENST00000227503 PHF20Q9BVI0 1012 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 SLC40A1Q9NP59 571 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 LRWD1Q9UFC0 647 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 LIMA1Q9UHB6 759 aaKnown RBP15.69■□□□□ 0.1
SF1-201ENST00000227503 ZNF804BA4D1E1 1349 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 TRIM75PA6NK02 468 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 CHUKO15111 745 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 NKRFO15226 690 aaKnown RBP eCLIP15.69■□□□□ 0.18e-7■■■□□ 14.6
SF1-201ENST00000227503 HSF2BPO75031 334 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 B4GALNT4Q76KP1 1039 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 SH3RF1Q7Z6J0 888 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 IQCA1Q86XH1 822 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 MS4A14Q96JA4 679 aa15.69■□□□□ 0.1
SF1-201ENST00000227503 DDX20Q9UHI6 824 aaKnown RBP15.69■□□□□ 0.1
SF1-201ENST00000227503 MAGEB6P1A0A0J9YX57 407 aa15.68■□□□□ 0.1
SF1-201ENST00000227503 MOCS3O95396 460 aa15.68■□□□□ 0.1
SF1-201ENST00000227503 CRKLP46109 303 aaKnown RBP15.68■□□□□ 0.1
SF1-201ENST00000227503 NAIF1Q69YI7 327 aaPredicted RBP15.68■□□□□ 0.1
SF1-201ENST00000227503 MTRQ99707 1265 aa15.68■□□□□ 0.1
SF1-201ENST00000227503 PHLPP1O60346 1717 aa15.68■□□□□ 0.1
SF1-201ENST00000227503 ZNF233A6NK53 670 aa15.68■□□□□ 0.1
SF1-201ENST00000227503 E7EVH7 732 aa15.68■□□□□ 0.1
SF1-201ENST00000227503 PRPF3O43395 683 aaKnown RBP15.68■□□□□ 0.1
SF1-201ENST00000227503 PPP1R12BO60237 982 aaPredicted RBP15.68■□□□□ 0.1
SF1-201ENST00000227503 RNASE9P60153 205 aaKnown RBP15.68■□□□□ 0.1
SF1-201ENST00000227503 FAM228AQ86W67 206 aa15.68■□□□□ 0.1
SF1-201ENST00000227503 AMOTL1Q8IY63 956 aa15.68■□□□□ 0.1
SF1-201ENST00000227503 SPATA4Q8NEY3 305 aa15.68■□□□□ 0.1
SF1-201ENST00000227503 ZSCAN10Q96SZ4 725 aaPredicted RBP15.68■□□□□ 0.1
SF1-201ENST00000227503 VEZTQ9HBM0 779 aa15.68■□□□□ 0.1
SF1-201ENST00000227503 HAUS2Q9NVX0 235 aa15.68■□□□□ 0.1
SF1-201ENST00000227503 NFU1Q9UMS0 254 aa15.68■□□□□ 0.1
SF1-201ENST00000227503 B4DLN1 442 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 KRT86O43790 486 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 OPA1O60313 960 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 CARSP49589 748 aaKnown RBP15.67■□□□□ 0.1
SF1-201ENST00000227503 PAK1Q13153 545 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 IRF2BP1Q8IU81 584 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 CCT8L2Q96SF2 557 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 ABCF2Q9UG63 623 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 COL1A1P02452 1464 aaPredicted RBP15.67■□□□□ 0.1
SF1-201ENST00000227503 CICQ96RK0 1608 aaPredicted RBP15.67■□□□□ 0.1
SF1-201ENST00000227503 ZNF263O14978 683 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 PLEKHA8P1O95397 391 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 PARP1P09874 1014 aaKnown RBP15.67■□□□□ 0.1
SF1-201ENST00000227503 KRT2P35908 639 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 DDR1Q08345 913 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 CCDC96Q2M329 555 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 PREPLQ4J6C6 727 aaPredicted RBP15.67■□□□□ 0.1
SF1-201ENST00000227503 FAXDC2Q96IV6 333 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms