RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 ZSCAN29Q8IWY8 852 aaPredicted RBP17.26■□□□□ 0.35
VTN-201ENST00000226218 SPATA4Q8NEY3 305 aa17.26■□□□□ 0.35
VTN-201ENST00000226218 LRRC15Q8TF66 581 aa17.26■□□□□ 0.35
VTN-201ENST00000226218 CAVIN3Q969G5 261 aa17.26■□□□□ 0.35
VTN-201ENST00000226218 DHTKD1Q96HY7 919 aaPredicted RBP17.26■□□□□ 0.35
VTN-201ENST00000226218 ERGIC2Q96RQ1 377 aa17.26■□□□□ 0.35
VTN-201ENST00000226218 DEF6Q9H4E7 631 aa17.26■□□□□ 0.35
VTN-201ENST00000226218 SH2D4AQ9H788 454 aa17.26■□□□□ 0.35
VTN-201ENST00000226218 KBTBD4Q9NVX7 518 aa17.26■□□□□ 0.35
VTN-201ENST00000226218 ZNHIT6Q9NWK9 470 aaKnown RBP17.26■□□□□ 0.35
VTN-201ENST00000226218 TMOD3Q9NYL9 352 aa17.26■□□□□ 0.35
VTN-201ENST00000226218 ASAP1Q9ULH1 1129 aa17.26■□□□□ 0.35
VTN-201ENST00000226218 NUTM2BA6NNL0 878 aaPredicted RBP17.25■□□□□ 0.35
VTN-201ENST00000226218 NUTM2EB1AL46 878 aaPredicted RBP17.25■□□□□ 0.35
VTN-201ENST00000226218 LCA5LO95447 670 aa17.25■□□□□ 0.35
VTN-201ENST00000226218 VEGFAP15692 232 aaPredicted RBP17.25■□□□□ 0.35
VTN-201ENST00000226218 TRIM21P19474 475 aaKnown RBP17.25■□□□□ 0.35
VTN-201ENST00000226218 CYP7A1P22680 504 aa17.25■□□□□ 0.35
VTN-201ENST00000226218 EPHB4P54760 987 aa17.25■□□□□ 0.35
VTN-201ENST00000226218 ALS2CLQ60I27 953 aa17.25■□□□□ 0.35
VTN-201ENST00000226218 EMBQ6PCB8 327 aa17.25■□□□□ 0.35
VTN-201ENST00000226218 MAGEC2Q9UBF1 373 aaPredicted RBP17.25■□□□□ 0.35
VTN-201ENST00000226218 LRWD1Q9UFC0 647 aa17.25■□□□□ 0.35
VTN-201ENST00000226218 FAM205AQ6ZU69 1335 aa17.25■□□□□ 0.35
VTN-201ENST00000226218 OPA1O60313 960 aa17.24■□□□□ 0.35
VTN-201ENST00000226218 IPO7O95373 1038 aaKnown RBP17.24■□□□□ 0.35
VTN-201ENST00000226218 NLRP5P59047 1200 aa17.24■□□□□ 0.35
VTN-201ENST00000226218 ANKRD18AQ8IVF6 992 aa17.24■□□□□ 0.35
VTN-201ENST00000226218 SMCR8Q8TEV9 937 aaPredicted RBP17.24■□□□□ 0.35
VTN-201ENST00000226218 ARL8AQ96BM9 186 aa17.24■□□□□ 0.35
VTN-201ENST00000226218 LAMB2P55268 1798 aa17.24■□□□□ 0.35
VTN-201ENST00000226218 PES1O00541 588 aaKnown RBP17.24■□□□□ 0.35
VTN-201ENST00000226218 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
VTN-201ENST00000226218 PCP11498 1178 aaKnown RBP17.24■□□□□ 0.35
VTN-201ENST00000226218 SKIDA1Q1XH10 827 aa17.24■□□□□ 0.35
VTN-201ENST00000226218 POTEDQ86YR6 584 aa17.24■□□□□ 0.35
VTN-201ENST00000226218 ZNF34Q8IZ26 560 aa17.24■□□□□ 0.35
VTN-201ENST00000226218 CNPY4Q8N129 248 aa17.24■□□□□ 0.35
VTN-201ENST00000226218 OSBPL9Q96SU4 736 aa17.24■□□□□ 0.35
VTN-201ENST00000226218 STRCP1A6NGW2 1772 aa17.24■□□□□ 0.35
VTN-201ENST00000226218 MAGEB6P1A0A0J9YX57 407 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 SHTN1A0MZ66 631 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 A6NNZ2 444 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 TACC1O75410 805 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 CCNE1P24864 410 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 TBC1D8BQ0IIM8 1120 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 NNTQ13423 1086 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 TUBB8Q3ZCM7 444 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 KRT26Q7Z3Y9 468 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 IQCA1Q86XH1 822 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 CSGALNACT2Q8N6G5 542 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 PIGBQ92521 554 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 CNOT6LQ96LI5 555 aaKnown RBP17.23■□□□□ 0.35
VTN-201ENST00000226218 CARD10Q9BWT7 1032 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 BRIP1Q9BX63 1249 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 CCSER1Q9C0I3 900 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 LRP2BPQ9P2M1 347 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 PLAGL2Q9UPG8 496 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.23■□□□□ 0.35
VTN-201ENST00000226218 CYP2D7A0A087X1C5 515 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 M0R2N6 131 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 PLEKP08567 350 aaPredicted RBP17.23■□□□□ 0.35
VTN-201ENST00000226218 HNRNPH1P31943 449 aaKnown RBP17.23■□□□□ 0.35
VTN-201ENST00000226218 P2RX5Q93086 422 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 HINFPQ9BQA5 517 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 PAGR1Q9BTK6 254 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 MLXIPQ9HAP2 919 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 STIM2Q9P246 746 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 ARHGAP20Q9P2F6 1191 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 HYOU1Q9Y4L1 999 aa17.23■□□□□ 0.35
VTN-201ENST00000226218 COL1A1P02452 1464 aaPredicted RBP17.22■□□□□ 0.35
VTN-201ENST00000226218 SCN7AQ01118 1682 aa17.22■□□□□ 0.35
VTN-201ENST00000226218 KIAA1551Q9HCM1 1747 aa17.22■□□□□ 0.35
VTN-201ENST00000226218 PP2D1A8MPX8 630 aa17.22■□□□□ 0.35
VTN-201ENST00000226218 ERVV-1B6SEH8 477 aa17.22■□□□□ 0.35
VTN-201ENST00000226218 NKRFO15226 690 aaKnown RBP eCLIP17.22■□□□□ 0.35
VTN-201ENST00000226218 TCP1P17987 556 aaKnown RBP17.22■□□□□ 0.35
VTN-201ENST00000226218 FNTAP49354 379 aa17.22■□□□□ 0.35
VTN-201ENST00000226218 GSCP56915 257 aaPredicted RBP17.22■□□□□ 0.35
VTN-201ENST00000226218 EMC10Q5UCC4 262 aa17.22■□□□□ 0.35
VTN-201ENST00000226218 IQCDQ96DY2 449 aa17.22■□□□□ 0.35
VTN-201ENST00000226218 ZEB2O60315 1214 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 CLSTN1O94985 981 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 CYP19A1P11511 503 aaPredicted RBP17.21■□□□□ 0.35
VTN-201ENST00000226218 ATF3P18847 181 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 PRPF38AQ8NAV1 312 aaKnown RBP17.21■□□□□ 0.35
VTN-201ENST00000226218 SLC4A9Q96Q91 983 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 MYCBPQ99417 103 aaPredicted RBP17.21■□□□□ 0.35
VTN-201ENST00000226218 PCDHA13Q9Y5I0 950 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 COL4A1P02462 1669 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 ZNF804BA4D1E1 1349 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 PJA2O43164 708 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 USO1O60763 962 aaKnown RBP17.21■□□□□ 0.35
VTN-201ENST00000226218 MOCS3O95396 460 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 INPP5BP32019 993 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 SLC7A5Q01650 507 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 FBXW10Q5XX13 1052 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 ANKRD40Q6AI12 368 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 NFRKBQ6P4R8 1299 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 BLIDQ8IZY5 108 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms