RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ADKP55263 362 aaKnown RBP20.34■□□□□ 0.85
CLIP2-201ENST00000223398 PPP2R3AQ06190 1150 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 PCDHA4Q9UN74 947 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 HNRNPDLO14979 420 aaKnown RBP20.34■□□□□ 0.85
CLIP2-201ENST00000223398 GNA14O95837 355 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 UBE2SQ16763 222 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 DAAM2Q86T65 1068 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 SSH2Q76I76 1423 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 CLASP1Q7Z460 1538 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 TICAM2Q86XR7 235 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 STAP2Q9UGK3 403 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 FAM196BA6NMK8 535 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 MEIS1O00470 390 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 DYNC1I1O14576 645 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 ECE2O60344 883 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 HOXA13P31271 388 aaPredicted RBP20.34■□□□□ 0.85
CLIP2-201ENST00000223398 TXNRD1Q16881 649 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 SH3RF3Q8TEJ3 882 aaPredicted RBP20.34■□□□□ 0.85
CLIP2-201ENST00000223398 TTC14Q96N46 770 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 MTMR6Q9Y217 621 aa20.34■□□□□ 0.85
CLIP2-201ENST00000223398 FMNL1O95466 1100 aaPredicted RBP20.33■□□□□ 0.85
CLIP2-201ENST00000223398 BRD1O95696 1058 aa20.33■□□□□ 0.85
CLIP2-201ENST00000223398 STAT1P42224 750 aa20.33■□□□□ 0.85
CLIP2-201ENST00000223398 CDK8P49336 464 aa20.33■□□□□ 0.85
CLIP2-201ENST00000223398 ADAM9Q13443 819 aa20.33■□□□□ 0.85
CLIP2-201ENST00000223398 FAM26FQ5R3K3 315 aa20.33■□□□□ 0.85
CLIP2-201ENST00000223398 TBCKQ8TEA7 893 aa20.33■□□□□ 0.85
CLIP2-201ENST00000223398 PRKAG2Q9UGJ0 569 aa20.33■□□□□ 0.85
CLIP2-201ENST00000223398 PEX26Q7Z412 305 aa20.33■□□□□ 0.85
CLIP2-201ENST00000223398 PCDHA7Q9UN72 937 aa20.33■□□□□ 0.85
CLIP2-201ENST00000223398 GH2P01242 217 aa20.33■□□□□ 0.84
CLIP2-201ENST00000223398 CRKP46108 304 aa20.33■□□□□ 0.84
CLIP2-201ENST00000223398 TMTC1Q8IUR5 882 aa20.33■□□□□ 0.84
CLIP2-201ENST00000223398 SLC7A3Q8WY07 619 aa20.33■□□□□ 0.84
CLIP2-201ENST00000223398 ATP6V0A1Q93050 837 aa20.33■□□□□ 0.84
CLIP2-201ENST00000223398 CELF1Q92879 486 aaKnown RBP20.33■□□□□ 0.84
CLIP2-201ENST00000223398 UTP11Q9Y3A2 253 aaKnown RBP20.33■□□□□ 0.84
CLIP2-201ENST00000223398 CDC42BPGQ6DT37 1551 aa20.33■□□□□ 0.84
CLIP2-201ENST00000223398 ZBTB24O43167 697 aaPredicted RBP20.32■□□□□ 0.84
CLIP2-201ENST00000223398 EVCP57679 992 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 TFDP1Q14186 410 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 MAP7D1Q3KQU3 841 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 KIAA1468Q9P260 1216 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 EIF2AK2P19525 551 aaKnown RBP20.32■□□□□ 0.84
CLIP2-201ENST00000223398 RPN1P04843 607 aaKnown RBP20.32■□□□□ 0.84
CLIP2-201ENST00000223398 CCT6BQ92526 530 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 H0YCG3 227 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 H7C1W4 665 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 CCND2P30279 289 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.32■□□□□ 0.84
CLIP2-201ENST00000223398 RSPH3Q86UC2 560 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 C17orf53Q8N3J3 647 aaPredicted RBP20.32■□□□□ 0.84
CLIP2-201ENST00000223398 SMC1BQ8NDV3 1235 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 SMC6Q96SB8 1091 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 TRIM7Q9C029 511 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 ZNF853P0CG23 659 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 PRDX5P30044 214 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 CCDC105Q8IYK2 499 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 KRT222Q8N1A0 295 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 CHAMP1Q96JM3 812 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 XPO4Q9C0E2 1151 aaKnown RBP20.32■□□□□ 0.84
CLIP2-201ENST00000223398 LMBRD1Q9NUN5 540 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 SYNMO15061 1565 aa20.32■□□□□ 0.84
CLIP2-201ENST00000223398 ACTN4O43707 911 aaKnown RBP20.31■□□□□ 0.84
CLIP2-201ENST00000223398 MCAMP43121 646 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 NKX1-1Q15270 411 aaPredicted RBP20.31■□□□□ 0.84
CLIP2-201ENST00000223398 SLFNL1Q499Z3 407 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 EPHA10Q5JZY3 1008 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 ZSWIM5Q9P217 1185 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 VPS18Q9P253 973 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 HESX1Q9UBX0 185 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 LRFN2Q9ULH4 789 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 MIS18BP1Q6P0N0 1132 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 C2orf69Q8N8R5 385 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 IFIH1Q9BYX4 1025 aaKnown RBP20.31■□□□□ 0.84
CLIP2-201ENST00000223398 PKP1Q13835 747 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 CDC37Q16543 378 aaPredicted RBP20.31■□□□□ 0.84
CLIP2-201ENST00000223398 CEP170P1Q96L14 293 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 MINPP1Q9UNW1 487 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 CYP2D6P10635 497 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 PIK3CAP42336 1068 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 NDUFA8P51970 172 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 FBXO18Q8NFZ0 1043 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 RSPH14Q9UHP6 348 aa20.31■□□□□ 0.84
CLIP2-201ENST00000223398 ITIH3Q06033 890 aa20.3■□□□□ 0.84
CLIP2-201ENST00000223398 KRBA2Q6ZNG9 492 aa20.3■□□□□ 0.84
CLIP2-201ENST00000223398 GOLGA5Q8TBA6 731 aa20.3■□□□□ 0.84
CLIP2-201ENST00000223398 MARK3P27448 753 aa20.3■□□□□ 0.84
CLIP2-201ENST00000223398 GBP6Q6ZN66 633 aa20.3■□□□□ 0.84
CLIP2-201ENST00000223398 CPLX4Q7Z7G2 160 aa20.3■□□□□ 0.84
CLIP2-201ENST00000223398 LONP1P36776 959 aaKnown RBP20.3■□□□□ 0.84
CLIP2-201ENST00000223398 KRT81Q14533 505 aa20.3■□□□□ 0.84
CLIP2-201ENST00000223398 RPS6KA1Q15418 735 aa20.3■□□□□ 0.84
CLIP2-201ENST00000223398 MTERF2Q49AM1 385 aa20.3■□□□□ 0.84
CLIP2-201ENST00000223398 NLRP7Q8WX94 980 aa20.3■□□□□ 0.84
CLIP2-201ENST00000223398 RNF26Q9BY78 433 aaPredicted RBP20.3■□□□□ 0.84
CLIP2-201ENST00000223398 GTPBP6O43824 516 aaPredicted RBP20.3■□□□□ 0.84
CLIP2-201ENST00000223398 HPDP32754 393 aaPredicted RBP20.3■□□□□ 0.84
CLIP2-201ENST00000223398 RETREG2Q8NC44 543 aa20.3■□□□□ 0.84
CLIP2-201ENST00000223398 A2ML1A8K2U0 1454 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms