RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 TMEM60Q9H2L4 133 aa15.12■□□□□ 0.01
RAB3D-201ENST00000222120 RIC1Q4ADV7 1423 aa15.12■□□□□ 0.01
RAB3D-201ENST00000222120 H0YHG0 523 aa15.12■□□□□ 0.01
RAB3D-201ENST00000222120 CTIFO43310 598 aaKnown RBP15.12■□□□□ 0.01
RAB3D-201ENST00000222120 CFBP00751 764 aa15.12■□□□□ 0.01
RAB3D-201ENST00000222120 SEC23AQ15436 765 aa15.12■□□□□ 0.01
RAB3D-201ENST00000222120 FBXL16Q8N461 479 aa15.12■□□□□ 0.01
RAB3D-201ENST00000222120 LRRN4CLQ8ND94 238 aa15.12■□□□□ 0.01
RAB3D-201ENST00000222120 P2RX5Q93086 422 aa15.12■□□□□ 0.01
RAB3D-201ENST00000222120 MRPL44Q9H9J2 332 aaKnown RBP15.12■□□□□ 0.01
RAB3D-201ENST00000222120 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.12■□□□□ 0.01
RAB3D-201ENST00000222120 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.12■□□□□ 0.01
RAB3D-201ENST00000222120 MCM3P25205 808 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 RASGRP2Q7LDG7 609 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 PTF1AQ7RTS3 328 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 FBXO33Q7Z6M2 555 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 SMCR8Q8TEV9 937 aaPredicted RBP15.11■□□□□ 0.01
RAB3D-201ENST00000222120 TSPYL1Q9H0U9 437 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 KIAA1024Q9UPX6 916 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 PCDHA1Q9Y5I3 950 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 ADGRG1Q9Y653 693 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 BCL9O00512 1426 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 PNMA6AP0CW24 399 aaPredicted RBP15.11■□□□□ 0.01
RAB3D-201ENST00000222120 SRGAP1Q7Z6B7 1085 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 NALCNQ8IZF0 1738 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 ANKRD7Q92527 254 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 TEKT1Q969V4 418 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 DDX25Q9UHL0 483 aaKnown RBP15.11■□□□□ 0.01
RAB3D-201ENST00000222120 RSPH14Q9UHP6 348 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 SERPINB13Q9UIV8 391 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 LARP4BQ92615 738 aaKnown RBP15.11■□□□□ 0.01
RAB3D-201ENST00000222120 CHP1Q99653 195 aa15.11■□□□□ 0.01
RAB3D-201ENST00000222120 DDX39AO00148 427 aaKnown RBP15.1■□□□□ 0.01
RAB3D-201ENST00000222120 SRGAP2O75044 1071 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 CXCR5P32302 372 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 PKN1Q16512 942 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 GPBP1Q86WP2 473 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 PANX2Q96RD6 677 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 MTA3Q9BTC8 594 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 CNTNAP5Q8WYK1 1306 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 TTC26A0AVF1 554 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 ORC4O43929 436 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 FCER1AP12319 257 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 BMP6P22004 513 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 GPSM2P81274 684 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 ARL6IP4Q66PJ3 421 aaKnown RBP15.1■□□□□ 0.01
RAB3D-201ENST00000222120 RAD9BQ6WBX8 426 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 NUP58Q9BVL2 599 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 NDUFA10O95299 355 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 ZSCAN20P17040 1043 aaPredicted RBP15.1■□□□□ 0.01
RAB3D-201ENST00000222120 LONRF2Q1L5Z9 754 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 MAATS1Q7Z4T9 603 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 RDH13Q8NBN7 331 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 KANSL2Q9H9L4 492 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 PDE11AQ9HCR9 933 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 TFR2Q9UP52 801 aa15.1■□□□□ 0.01
RAB3D-201ENST00000222120 MEIS1O00470 390 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 FAM13AO94988 1023 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 GDF11O95390 407 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 DPYDQ12882 1025 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 DHX37Q8IY37 1157 aaKnown RBP15.09■□□□□ 0.01
RAB3D-201ENST00000222120 RABGGTAQ92696 567 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 GJA10Q969M2 543 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 A0A087X0B3 334 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 RCAN1P53805 252 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 POTEDQ86YR6 584 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 MYOCDQ8IZQ8 938 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 ABHD10Q9NUJ1 306 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 PCDHB13Q9Y5F0 798 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 CETN3O15182 167 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 UBXN2AP68543 259 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 GALNT17Q6IS24 598 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 HAUS4Q9H6D7 363 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 GOPCQ9HD26 462 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 JCADQ9P266 1359 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 SETQ01105 290 aaPredicted RBP15.09■□□□□ 0.01
RAB3D-201ENST00000222120 NR1I3Q14994 352 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 OGFOD1Q8N543 542 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 MXD3Q9BW11 206 aa15.09■□□□□ 0.01
RAB3D-201ENST00000222120 DCCP43146 1447 aa15.08■□□□□ 0.01
RAB3D-201ENST00000222120 SSR1P43307 286 aaKnown RBP15.08■□□□□ 0
RAB3D-201ENST00000222120 SP4Q02446 784 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 CCDC174Q6PII3 467 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 MB21D1Q8N884 522 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 PANK4Q9NVE7 773 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 HDAC6Q9UBN7 1215 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 ADD3Q9UEY8 706 aaKnown RBP15.08■□□□□ 0
RAB3D-201ENST00000222120 SLIT3O75094 1523 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 A0A1B0GTH6 734 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 USP17L15C9J2P7 530 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 USP17L13C9JLJ4 530 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 USP17L11C9JVI0 530 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 USP17L18D6R9N7 530 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 USP17L22D6RA61 530 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 USP17L17D6RBQ6 530 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 USP17L19D6RCP7 530 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 USP17L20D6RJB6 530 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 TDP2O95551 362 aa15.08■□□□□ 0
RAB3D-201ENST00000222120 POLR2FP61218 127 aaKnown RBP15.08■□□□□ 0
RAB3D-201ENST00000222120 USP17L24Q0WX57 530 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms