RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 ANKRD40Q6AI12 368 aa20.7■□□□□ 0.9
CACTIN-201ENST00000221899 USP17L1Q7RTZ2 530 aa20.7■□□□□ 0.9
CACTIN-201ENST00000221899 CNOT6LQ96LI5 555 aaKnown RBP20.7■□□□□ 0.9
CACTIN-201ENST00000221899 DRC1Q96MC2 740 aa20.7■□□□□ 0.9
CACTIN-201ENST00000221899 KBTBD4Q9NVX7 518 aa20.7■□□□□ 0.9
CACTIN-201ENST00000221899 IPO7O95373 1038 aaKnown RBP20.69■□□□□ 0.9
CACTIN-201ENST00000221899 PLEKP08567 350 aaPredicted RBP20.69■□□□□ 0.9
CACTIN-201ENST00000221899 MEA1Q16626 185 aa20.69■□□□□ 0.9
CACTIN-201ENST00000221899 KRT26Q7Z3Y9 468 aa20.69■□□□□ 0.9
CACTIN-201ENST00000221899 TTYH3Q9C0H2 523 aa20.69■□□□□ 0.9
CACTIN-201ENST00000221899 ARPP21Q9UBL0 812 aaPredicted RBP20.69■□□□□ 0.9
CACTIN-201ENST00000221899 ANKRD65E5RJM6 399 aa20.69■□□□□ 0.9
CACTIN-201ENST00000221899 GOLGA8HP0CJ92 632 aa20.69■□□□□ 0.9
CACTIN-201ENST00000221899 STK4Q13043 487 aa20.69■□□□□ 0.9
CACTIN-201ENST00000221899 CCDC24Q8N4L8 307 aa20.69■□□□□ 0.9
CACTIN-201ENST00000221899 RSPH14Q9UHP6 348 aa20.69■□□□□ 0.9
CACTIN-201ENST00000221899 DOT1LQ8TEK3 1739 aa20.69■□□□□ 0.9
CACTIN-201ENST00000221899 IVLP07476 585 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 ASIC1P78348 528 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 MRPS25P82663 173 aaKnown RBP20.68■□□□□ 0.9
CACTIN-201ENST00000221899 LRRC31Q6UY01 552 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 ATP8A2Q9NTI2 1148 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 M0R2N6 131 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.68■□□□□ 0.9
CACTIN-201ENST00000221899 FBXO33Q7Z6M2 555 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 GOLGA6L1Q8N7Z2 621 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 P2RX5Q93086 422 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 NOC4LQ9BVI4 516 aaKnown RBP20.68■□□□□ 0.9
CACTIN-201ENST00000221899 CYTH3O43739 400 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 TXNRD1Q16881 649 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 MAP9Q49MG5 647 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 AFAP1L1Q8TED9 768 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 LRWD1Q9UFC0 647 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 MAD2L2Q9UI95 211 aa20.68■□□□□ 0.9
CACTIN-201ENST00000221899 MYH14Q7Z406 1995 aaKnown RBP20.67■□□□□ 0.9
CACTIN-201ENST00000221899 KCNQ4P56696 695 aa20.67■□□□□ 0.9
CACTIN-201ENST00000221899 CKAP4Q07065 602 aaKnown RBP20.67■□□□□ 0.9
CACTIN-201ENST00000221899 CABP7Q86V35 215 aa20.67■□□□□ 0.9
CACTIN-201ENST00000221899 EHBP1Q8NDI1 1231 aa20.67■□□□□ 0.9
CACTIN-201ENST00000221899 ERCC3P19447 782 aa20.67■□□□□ 0.9
CACTIN-201ENST00000221899 GGCXP38435 758 aa20.67■□□□□ 0.9
CACTIN-201ENST00000221899 SLC20A2Q08357 652 aa20.67■□□□□ 0.9
CACTIN-201ENST00000221899 SLC44A5Q8NCS7 719 aa20.67■□□□□ 0.9
CACTIN-201ENST00000221899 CCSER1Q9C0I3 900 aa20.67■□□□□ 0.9
CACTIN-201ENST00000221899 SH3GLB2Q9NR46 395 aa20.67■□□□□ 0.9
CACTIN-201ENST00000221899 ZNF263O14978 683 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 HIBADHP31937 336 aaKnown RBP20.66■□□□□ 0.9
CACTIN-201ENST00000221899 ZBED6P86452 979 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 CCDC96Q2M329 555 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 LETM2Q2VYF4 491 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 COG1Q8WTW3 980 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 DHTKD1Q96HY7 919 aaPredicted RBP20.66■□□□□ 0.9
CACTIN-201ENST00000221899 PSMB7Q99436 277 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 STX8Q9UNK0 236 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 EIF3CLB5ME19 914 aaKnown RBP20.66■□□□□ 0.9
CACTIN-201ENST00000221899 CCNE1P24864 410 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 MIIPQ5JXC2 388 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 TXNRD3Q86VQ6 643 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 EIF3CQ99613 913 aaKnown RBP20.66■□□□□ 0.9
CACTIN-201ENST00000221899 SELENOOQ9BVL4 669 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 TRIM9Q9C026 710 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 VIPAS39Q9H9C1 493 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 ZNF652Q9Y2D9 606 aa20.66■□□□□ 0.9
CACTIN-201ENST00000221899 STXBP3O00186 592 aa20.65■□□□□ 0.9
CACTIN-201ENST00000221899 CCNT1O60563 726 aaKnown RBP20.65■□□□□ 0.9
CACTIN-201ENST00000221899 PRPF6O94906 941 aaKnown RBP20.65■□□□□ 0.9
CACTIN-201ENST00000221899 AARSP49588 968 aaKnown RBP eCLIP20.65■□□□□ 0.93e-6■■■■■ 61.8
CACTIN-201ENST00000221899 KIF5AQ12840 1032 aa20.65■□□□□ 0.9
CACTIN-201ENST00000221899 EZH2Q15910 746 aaKnown RBP20.65■□□□□ 0.9
CACTIN-201ENST00000221899 SECISBP2LQ93073 1101 aaKnown RBP20.65■□□□□ 0.9
CACTIN-201ENST00000221899 CRACR2AQ9BSW2 395 aa20.65■□□□□ 0.9
CACTIN-201ENST00000221899 MKNK2Q9HBH9 465 aa20.65■□□□□ 0.9
CACTIN-201ENST00000221899 SCN7AQ01118 1682 aa20.65■□□□□ 0.9
CACTIN-201ENST00000221899 MCM3P25205 808 aa20.65■□□□□ 0.9
CACTIN-201ENST00000221899 MATR3P43243 847 aaKnown RBP eCLIP20.65■□□□□ 0.9
CACTIN-201ENST00000221899 GRM4Q14833 912 aa20.65■□□□□ 0.9
CACTIN-201ENST00000221899 SF3B3Q15393 1217 aaKnown RBP20.65■□□□□ 0.9
CACTIN-201ENST00000221899 DZIP1Q86YF9 867 aaKnown RBP20.65■□□□□ 0.9
CACTIN-201ENST00000221899 NOC3LQ8WTT2 800 aaKnown RBP20.65■□□□□ 0.9
CACTIN-201ENST00000221899 CCDC42Q96M95 316 aa20.65■□□□□ 0.9
CACTIN-201ENST00000221899 MLXIPQ9HAP2 919 aa20.65■□□□□ 0.9
CACTIN-201ENST00000221899 TCP11L1Q9NUJ3 509 aa20.65■□□□□ 0.9
CACTIN-201ENST00000221899 FLT1P17948 1338 aa20.65■□□□□ 0.9
CACTIN-201ENST00000221899 ZC3H4Q9UPT8 1303 aaKnown RBP20.65■□□□□ 0.9
CACTIN-201ENST00000221899 NUTM2BA6NNL0 878 aaPredicted RBP20.64■□□□□ 0.9
CACTIN-201ENST00000221899 NUTM2EB1AL46 878 aaPredicted RBP20.64■□□□□ 0.9
CACTIN-201ENST00000221899 TECP42680 631 aa20.64■□□□□ 0.9
CACTIN-201ENST00000221899 SBK1Q52WX2 424 aa20.64■□□□□ 0.9
CACTIN-201ENST00000221899 NUP58Q9BVL2 599 aa20.64■□□□□ 0.9
CACTIN-201ENST00000221899 SLC39A2Q9NP94 309 aa20.64■□□□□ 0.9
CACTIN-201ENST00000221899 CAPN6Q9Y6Q1 641 aa20.64■□□□□ 0.9
CACTIN-201ENST00000221899 TARSL2A2RTX5 802 aaKnown RBP20.64■□□□□ 0.89
CACTIN-201ENST00000221899 CCDC170Q8IYT3 715 aa20.64■□□□□ 0.89
CACTIN-201ENST00000221899 HDAC7Q8WUI4 952 aa20.64■□□□□ 0.89
CACTIN-201ENST00000221899 FAM207AQ9NSI2 230 aaPredicted RBP20.64■□□□□ 0.89
CACTIN-201ENST00000221899 SMARCAL1Q9NZC9 954 aa20.64■□□□□ 0.89
CACTIN-201ENST00000221899 BICDL2A1A5D9 508 aa20.63■□□□□ 0.89
CACTIN-201ENST00000221899 EPHB6O15197 1021 aa20.63■□□□□ 0.89
CACTIN-201ENST00000221899 RPS6KA5O75582 802 aa20.63■□□□□ 0.89
CACTIN-201ENST00000221899 TSPY3P0CV98 308 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms