RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 FBXO40Q9UH90 709 aa27.35■■□□□ 1.97
HOMER3-201ENST00000221222 PTCH2Q9Y6C5 1203 aa27.35■■□□□ 1.97
HOMER3-201ENST00000221222 STRNO43815 780 aa27.35■■□□□ 1.97
HOMER3-201ENST00000221222 ALAS1P13196 640 aa27.35■■□□□ 1.97
HOMER3-201ENST00000221222 COA7Q96BR5 231 aa27.35■■□□□ 1.97
HOMER3-201ENST00000221222 RNF146Q9NTX7 359 aa27.35■■□□□ 1.97
HOMER3-201ENST00000221222 SEC63Q9UGP8 760 aaKnown RBP27.35■■□□□ 1.97
HOMER3-201ENST00000221222 ZNFX1Q9P2E3 1918 aaKnown RBP27.34■■□□□ 1.97
HOMER3-201ENST00000221222 PTPREP23469 700 aa27.34■■□□□ 1.97
HOMER3-201ENST00000221222 SLC4A3P48751 1232 aa27.34■■□□□ 1.97
HOMER3-201ENST00000221222 MCM2P49736 904 aa27.34■■□□□ 1.97
HOMER3-201ENST00000221222 TRAF1Q13077 416 aa27.34■■□□□ 1.97
HOMER3-201ENST00000221222 WDR78Q5VTH9 848 aa27.34■■□□□ 1.97
HOMER3-201ENST00000221222 ABRAQ8N0Z2 381 aa27.34■■□□□ 1.97
HOMER3-201ENST00000221222 GTF3C6Q969F1 213 aa27.34■■□□□ 1.97
HOMER3-201ENST00000221222 TRERF1Q96PN7 1200 aa27.34■■□□□ 1.97
HOMER3-201ENST00000221222 ACAD9Q9H845 621 aa27.34■■□□□ 1.97
HOMER3-201ENST00000221222 CWC22Q9HCG8 908 aaKnown RBP27.34■■□□□ 1.97
HOMER3-201ENST00000221222 IVNS1ABPQ9Y6Y0 642 aa27.34■■□□□ 1.97
HOMER3-201ENST00000221222 ABCB11O95342 1321 aa27.33■■□□□ 1.97
HOMER3-201ENST00000221222 RBBP6Q7Z6E9 1792 aaKnown RBP27.33■■□□□ 1.97
HOMER3-201ENST00000221222 CPLX1O14810 134 aa27.33■■□□□ 1.97
HOMER3-201ENST00000221222 CD2BP2O95400 341 aaKnown RBP27.33■■□□□ 1.97
HOMER3-201ENST00000221222 TAL1P17542 331 aaPredicted RBP27.33■■□□□ 1.97
HOMER3-201ENST00000221222 HOXD10P28358 340 aa27.33■■□□□ 1.97
HOMER3-201ENST00000221222 CPLX2Q6PUV4 134 aaKnown RBP27.33■■□□□ 1.97
HOMER3-201ENST00000221222 PIBF1Q8WXW3 757 aa27.33■■□□□ 1.97
HOMER3-201ENST00000221222 RNF26Q9BY78 433 aaPredicted RBP27.33■■□□□ 1.97
HOMER3-201ENST00000221222 SH2B1Q9NRF2 756 aaPredicted RBP27.33■■□□□ 1.97
HOMER3-201ENST00000221222 HOMER2Q9NSB8 354 aa27.33■■□□□ 1.97
HOMER3-201ENST00000221222 RBM27Q9P2N5 1060 aaKnown RBP27.33■■□□□ 1.97
HOMER3-201ENST00000221222 SLC15A5A6NIM6 579 aa27.32■■□□□ 1.96
HOMER3-201ENST00000221222 FCER1AP12319 257 aa27.32■■□□□ 1.96
HOMER3-201ENST00000221222 GRB14Q14449 540 aa27.32■■□□□ 1.96
HOMER3-201ENST00000221222 USH1GQ495M9 461 aa27.32■■□□□ 1.96
HOMER3-201ENST00000221222 MORN1Q5T089 497 aa27.32■■□□□ 1.96
HOMER3-201ENST00000221222 ARMC5Q96C12 935 aa27.32■■□□□ 1.96
HOMER3-201ENST00000221222 SRRDQ9UH36 339 aa27.32■■□□□ 1.96
HOMER3-201ENST00000221222 GJD2Q9UKL4 321 aa27.32■■□□□ 1.96
HOMER3-201ENST00000221222 V9GY48 417 aaPredicted RBP27.32■■□□□ 1.96
HOMER3-201ENST00000221222 MYCP01106 439 aaPredicted RBP27.31■■□□□ 1.96
HOMER3-201ENST00000221222 PRMT2P55345 433 aa27.31■■□□□ 1.96
HOMER3-201ENST00000221222 MUM1L1Q5H9M0 696 aa27.31■■□□□ 1.96
HOMER3-201ENST00000221222 NECAB1Q8N987 351 aa27.31■■□□□ 1.96
HOMER3-201ENST00000221222 SOCS4Q8WXH5 440 aa27.31■■□□□ 1.96
HOMER3-201ENST00000221222 CLEC4DQ8WXI8 215 aa27.31■■□□□ 1.96
HOMER3-201ENST00000221222 PCDHA1Q9Y5I3 950 aa27.31■■□□□ 1.96
HOMER3-201ENST00000221222 CENPFP49454 3210 aa27.31■■□□□ 1.96
HOMER3-201ENST00000221222 hCG_1642624A0A1W2PR95 340 aa27.3■■□□□ 1.96
HOMER3-201ENST00000221222 PRPF3O43395 683 aaKnown RBP27.3■■□□□ 1.96
HOMER3-201ENST00000221222 USP6NLQ92738 828 aa27.3■■□□□ 1.96
HOMER3-201ENST00000221222 PHKBQ93100 1093 aa27.3■■□□□ 1.96
HOMER3-201ENST00000221222 MMP19Q99542 508 aa27.3■■□□□ 1.96
HOMER3-201ENST00000221222 MAF1Q9H063 256 aa27.3■■□□□ 1.96
HOMER3-201ENST00000221222 MRPL11Q9Y3B7 192 aaKnown RBP27.3■■□□□ 1.96
HOMER3-201ENST00000221222 CDKL5O76039 1030 aa27.29■■□□□ 1.96
HOMER3-201ENST00000221222 ST3GAL1Q11201 340 aa27.29■■□□□ 1.96
HOMER3-201ENST00000221222 KCTD2Q14681 263 aa27.29■■□□□ 1.96
HOMER3-201ENST00000221222 SLC9C1Q4G0N8 1177 aa27.29■■□□□ 1.96
HOMER3-201ENST00000221222 NUDT12Q9BQG2 462 aa27.29■■□□□ 1.96
HOMER3-201ENST00000221222 NFIBO00712 420 aa27.28■■□□□ 1.96
HOMER3-201ENST00000221222 ADORA2AP29274 412 aa27.28■■□□□ 1.96
HOMER3-201ENST00000221222 PRKCZQ05513 592 aa27.28■■□□□ 1.96
HOMER3-201ENST00000221222 PRPF38BQ5VTL8 546 aaKnown RBP27.28■■□□□ 1.96
HOMER3-201ENST00000221222 TRIM22Q8IYM9 498 aa27.28■■□□□ 1.96
HOMER3-201ENST00000221222 RGS22Q8NE09 1264 aa27.28■■□□□ 1.96
HOMER3-201ENST00000221222 A1CFQ9NQ94 594 aaKnown RBP27.28■■□□□ 1.96
HOMER3-201ENST00000221222 GABRQQ9UN88 632 aa27.28■■□□□ 1.96
HOMER3-201ENST00000221222 PLXNA1Q9UIW2 1896 aa27.28■■□□□ 1.96
HOMER3-201ENST00000221222 hCG_1984214I3L0E3 225 aa27.27■■□□□ 1.96
HOMER3-201ENST00000221222 CTDNEP1O95476 244 aa27.27■■□□□ 1.96
HOMER3-201ENST00000221222 EN2P19622 333 aaPredicted RBP27.27■■□□□ 1.96
HOMER3-201ENST00000221222 FLT3LGP49771 235 aa27.27■■□□□ 1.96
HOMER3-201ENST00000221222 SSRP1Q08945 709 aaKnown RBP27.27■■□□□ 1.96
HOMER3-201ENST00000221222 MAP2K5Q13163 448 aa27.27■■□□□ 1.96
HOMER3-201ENST00000221222 PFKFB3Q16875 520 aaPredicted RBP27.27■■□□□ 1.96
HOMER3-201ENST00000221222 ZNF713Q8N859 430 aaPredicted RBP27.27■■□□□ 1.96
HOMER3-201ENST00000221222 SLC26A6Q9BXS9 759 aa27.27■■□□□ 1.96
HOMER3-201ENST00000221222 PFASO15067 1338 aa27.27■■□□□ 1.96
HOMER3-201ENST00000221222 HOXC6P09630 235 aa27.26■■□□□ 1.95
HOMER3-201ENST00000221222 AKAP17AQ02040 695 aaKnown RBP27.26■■□□□ 1.95
HOMER3-201ENST00000221222 IRF5Q13568 498 aa27.26■■□□□ 1.95
HOMER3-201ENST00000221222 PKN1Q16512 942 aa27.26■■□□□ 1.95
HOMER3-201ENST00000221222 ANKRD35Q8N283 1001 aa27.26■■□□□ 1.95
HOMER3-201ENST00000221222 SH3TC2Q8TF17 1288 aa27.26■■□□□ 1.95
HOMER3-201ENST00000221222 TMX3Q96JJ7 454 aa27.26■■□□□ 1.95
HOMER3-201ENST00000221222 ZNF333Q96JL9 665 aa27.26■■□□□ 1.95
HOMER3-201ENST00000221222 STK36Q9NRP7 1315 aa27.26■■□□□ 1.95
HOMER3-201ENST00000221222 DNAJC25-GNG10A0A024R161 153 aa27.25■■□□□ 1.95
HOMER3-201ENST00000221222 OPLAHO14841 1288 aa27.25■■□□□ 1.95
HOMER3-201ENST00000221222 SCG2P13521 617 aa27.25■■□□□ 1.95
HOMER3-201ENST00000221222 RGS2P41220 211 aa27.25■■□□□ 1.95
HOMER3-201ENST00000221222 GHRHRQ02643 423 aa27.25■■□□□ 1.95
HOMER3-201ENST00000221222 WWC2Q6AWC2 1192 aa27.25■■□□□ 1.95
HOMER3-201ENST00000221222 MCF2L2Q86YR7 1114 aa27.25■■□□□ 1.95
HOMER3-201ENST00000221222 NSUN7Q8NE18 718 aaKnown RBP27.25■■□□□ 1.95
HOMER3-201ENST00000221222 CYP39A1Q9NYL5 469 aa27.25■■□□□ 1.95
HOMER3-201ENST00000221222 LCTP09848 1927 aa27.25■■□□□ 1.95
HOMER3-201ENST00000221222 PPFIA3O75145 1194 aa27.24■■□□□ 1.95
HOMER3-201ENST00000221222 SLC34A2O95436 690 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms