RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 ATF2P15336 505 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 STX2P32856 288 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 CLCN1P35523 988 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 KCTD2Q14681 263 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 RAPH1Q70E73 1250 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 EDC3Q96F86 508 aaKnown RBP12.15□□□□□ -0.46
KNOP1-201ENST00000219837 KLRF2D3W0D1 207 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 COBLO75128 1261 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 IFNB1P01574 187 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 PHKG2P15735 406 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 FAM114A2Q9NRY5 505 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 RABGAP1Q9Y3P9 1069 aa12.15□□□□□ -0.46
KNOP1-201ENST00000219837 ARHGAP42A6NI28 874 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 H7C0C1 242 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 ATP5JP18859 108 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 ATP5OP48047 213 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 IL1RL1Q01638 556 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 ARHGEF6Q15052 776 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 JADE1Q6IE81 842 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 RETREG2Q8NC44 543 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 PNMA1Q8ND90 353 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 UBN1Q9NPG3 1134 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 SMYD2Q9NRG4 433 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 PTPN22Q9Y2R2 807 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 RGS16O15492 202 aaPredicted RBP12.14□□□□□ -0.47
KNOP1-201ENST00000219837 PFKFB1P16118 471 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 RBBP5Q15291 538 aaKnown RBP12.14□□□□□ -0.47
KNOP1-201ENST00000219837 PHLDB2Q86SQ0 1253 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 ABT1Q9ULW3 272 aaKnown RBP12.14□□□□□ -0.47
KNOP1-201ENST00000219837 ADCY9O60503 1353 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 ZNF804BA4D1E1 1349 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 ZSCAN20P17040 1043 aaPredicted RBP12.14□□□□□ -0.47
KNOP1-201ENST00000219837 CRKLP46109 303 aaKnown RBP12.14□□□□□ -0.47
KNOP1-201ENST00000219837 ME3Q16798 604 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 TTLL7Q6ZT98 887 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 ZBTB33Q86T24 672 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 LRRC43Q8N309 656 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 PPM1KQ8N3J5 372 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 DCLK2Q8N568 766 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 ANGPTL3Q9Y5C1 460 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 SGK1O00141 431 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 IGSF3O75054 1194 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 CTNNA1P35221 906 aaKnown RBP12.14□□□□□ -0.47
KNOP1-201ENST00000219837 TSNAXIP1Q2TAA8 658 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 ZNF496Q96IT1 587 aaPredicted RBP12.14□□□□□ -0.47
KNOP1-201ENST00000219837 ABCF3Q9NUQ8 709 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 TRIM35Q9UPQ4 493 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 M0R2C6 588 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 VPS41P49754 854 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 LRRC24Q50LG9 513 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 C17orf53Q8N3J3 647 aaPredicted RBP12.14□□□□□ -0.47
KNOP1-201ENST00000219837 IQCDQ96DY2 449 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 SHANK2Q9UPX8 1470 aa12.14□□□□□ -0.47
KNOP1-201ENST00000219837 HEXIM1O94992 359 aaKnown RBP12.13□□□□□ -0.47
KNOP1-201ENST00000219837 RNF10Q8N5U6 811 aaKnown RBP12.13□□□□□ -0.47
KNOP1-201ENST00000219837 CNKSR1Q969H4 720 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 CCDC127Q96BQ5 260 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 MAD1L1Q9Y6D9 718 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 KCNQ3O43525 872 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 MYL3P08590 195 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 SCG2P13521 617 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 INPP5BP32019 993 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 WDR17Q8IZU2 1322 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 SRGAP2BP0DMP2 458 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 USP14P54578 494 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 CCNA1P78396 465 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 BFSP1Q12934 665 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 PPFIA1Q13136 1202 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 DPH5Q9H2P9 285 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 TCOF1Q13428 1488 aaKnown RBP12.13□□□□□ -0.47
KNOP1-201ENST00000219837 GDF11O95390 407 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 LMNB1P20700 586 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 MFAP3P55082 362 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 PDE1CQ14123 709 aaPredicted RBP12.13□□□□□ -0.47
KNOP1-201ENST00000219837 HS1BP3Q53T59 392 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 LRCH2Q5VUJ6 765 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 DACT3Q96B18 629 aaPredicted RBP12.13□□□□□ -0.47
KNOP1-201ENST00000219837 MIS12Q9H081 205 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 ATP8B3O60423 1300 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 CCDC84Q86UT8 332 aaPredicted RBP12.13□□□□□ -0.47
KNOP1-201ENST00000219837 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.13□□□□□ -0.47
KNOP1-201ENST00000219837 TNKSO95271 1327 aa12.13□□□□□ -0.47
KNOP1-201ENST00000219837 ADAM9Q13443 819 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 ANKRD20A3Q5VUR7 823 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 SYMPKQ92797 1274 aaKnown RBP12.12□□□□□ -0.47
KNOP1-201ENST00000219837 DBNDD1Q9H9R9 158 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 XDHP47989 1333 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 YEATS2Q9ULM3 1422 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 MMEL1Q495T6 779 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 ERFEQ4G0M1 354 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 RAB44Q7Z6P3 723 aaPredicted RBP12.12□□□□□ -0.47
KNOP1-201ENST00000219837 RXRBP28702 533 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 SLC38A10Q9HBR0 1119 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 CHL1O00533 1208 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 CYP4A11Q02928 519 aa12.12□□□□□ -0.47
KNOP1-201ENST00000219837 KMT5AQ9NQR1 393 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms