RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 INO80B-WBP1J3KQ70 363 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 KCTD1Q719H9 257 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 OR8K1Q8NGG5 319 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 INO80BQ9C086 356 aaPredicted RBP20.8■□□□□ 0.92
SMPD3-201ENST00000219334 PI4KBQ9UBF8 816 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 AATKQ6ZMQ8 1374 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 USP17L3A6NCW0 530 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 USP17L4A6NCW7 530 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 PFDN6O15212 129 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 USP17L1Q7RTZ2 530 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 PARP2Q9UGN5 583 aa20.8■□□□□ 0.92
SMPD3-201ENST00000219334 TBC1D8O95759 1140 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 PTPREP23469 700 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 UBXN2AP68543 259 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 CTAGE3PQ8IX95 158 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 WDR11Q9BZH6 1224 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 ZSWIM6Q9HCJ5 1215 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 PALD1Q9ULE6 856 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 KIAA1024Q9UPX6 916 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 RNF8O76064 485 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 ZSCAN20P17040 1043 aaPredicted RBP20.79■□□□□ 0.92
SMPD3-201ENST00000219334 PTGDRQ13258 359 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 Q3C1V9 767 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 RAB17Q9H0T7 212 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 RBSNQ9H1K0 784 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 RIC8AQ9NPQ8 531 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 KIAA1468Q9P260 1216 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 MMP10P09238 476 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 NLRP10Q86W26 655 aa20.79■□□□□ 0.92
SMPD3-201ENST00000219334 TYW5A2RUC4 315 aaKnown RBP20.78■□□□□ 0.92
SMPD3-201ENST00000219334 PIK3CAP42336 1068 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 RNASELQ05823 741 aaKnown RBP20.78■□□□□ 0.92
SMPD3-201ENST00000219334 IGSF1Q8N6C5 1336 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 SLC39A2Q9NP94 309 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 DBNLQ9UJU6 430 aaKnown RBP20.78■□□□□ 0.92
SMPD3-201ENST00000219334 METTL23Q86XA0 190 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 USP28Q96RU2 1077 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 ADCY9O60503 1353 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 ERBB3P21860 1342 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 STAT2P52630 851 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 DYNLL1P63167 89 aaKnown RBP20.78■□□□□ 0.92
SMPD3-201ENST00000219334 GRAPQ13588 217 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 ZMYM1Q5SVZ6 1142 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 GRAPLQ8TC17 118 aaPredicted RBP20.78■□□□□ 0.92
SMPD3-201ENST00000219334 LAD1O00515 517 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 KIAA1841Q6NSI8 718 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 TRIML1Q8N9V2 468 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 P3H4Q92791 437 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 GJA10Q969M2 543 aa20.78■□□□□ 0.92
SMPD3-201ENST00000219334 GADD45BO75293 160 aaPredicted RBP20.77■□□□□ 0.92
SMPD3-201ENST00000219334 CMA1P23946 247 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 CCND2P30279 289 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 MTMR3Q13615 1198 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 MAGEF1Q9HAY2 307 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 UGGT1Q9NYU2 1555 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 RSRC2Q7L4I2 434 aaKnown RBP20.77■□□□□ 0.92
SMPD3-201ENST00000219334 PALM2Q8IXS6 379 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 MASTLQ96GX5 879 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 DISC1Q9NRI5 854 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 BPIFB4P59827 614 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 MICALL1Q8N3F8 863 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 CARD6Q9BX69 1037 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 ATG3Q9NT62 314 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 PIM2Q9P1W9 311 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 CFAP74Q9C0B2 1584 aa20.77■□□□□ 0.92
SMPD3-201ENST00000219334 NEDD9Q14511 834 aa20.77■□□□□ 0.91
SMPD3-201ENST00000219334 TPCN1Q9ULQ1 816 aa20.77■□□□□ 0.91
SMPD3-201ENST00000219334 KIF21AQ7Z4S6 1674 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 NME8Q8N427 588 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 EPSTI1Q96J88 318 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 RPN1P04843 607 aaKnown RBP20.76■□□□□ 0.91
SMPD3-201ENST00000219334 GCFC2P16383 781 aaKnown RBP20.76■□□□□ 0.91
SMPD3-201ENST00000219334 PDIA3P30101 505 aaKnown RBP20.76■□□□□ 0.91
SMPD3-201ENST00000219334 ANKRD36BP1Q96IX9 119 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 SRP68Q9UHB9 627 aaKnown RBP20.76■□□□□ 0.91
SMPD3-201ENST00000219334 ZNF215Q9UL58 517 aaPredicted RBP20.76■□□□□ 0.91
SMPD3-201ENST00000219334 FAM170AA1A519 330 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 hCG_1984214I3L0E3 225 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 NSFP46459 744 aaKnown RBP20.76■□□□□ 0.91
SMPD3-201ENST00000219334 PTK2Q05397 1052 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 ZNF713Q8N859 430 aaPredicted RBP20.76■□□□□ 0.91
SMPD3-201ENST00000219334 RNF26Q9BY78 433 aaPredicted RBP20.76■□□□□ 0.91
SMPD3-201ENST00000219334 COA1Q9GZY4 146 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 PCDHA4Q9UN74 947 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 SOS2Q07890 1332 aaPredicted RBP20.76■□□□□ 0.91
SMPD3-201ENST00000219334 TRAPPC10P48553 1259 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 MAP7Q14244 749 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 C4orf50Q6ZRC1 276 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 GRK7Q8WTQ7 553 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 CCDC68Q9H2F9 335 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 PNMA3Q9UL41 463 aa20.76■□□□□ 0.91
SMPD3-201ENST00000219334 GKAP1Q5VSY0 366 aaPredicted RBP20.75■□□□□ 0.91
SMPD3-201ENST00000219334 ANKARQ7Z5J8 1434 aa20.75■□□□□ 0.91
SMPD3-201ENST00000219334 ESYT2A0FGR8 921 aa20.75■□□□□ 0.91
SMPD3-201ENST00000219334 RNF123Q5XPI4 1314 aa20.75■□□□□ 0.91
SMPD3-201ENST00000219334 PSDA5PKW4 1024 aaPredicted RBP20.75■□□□□ 0.91
SMPD3-201ENST00000219334 XPAP23025 273 aaPredicted RBP20.75■□□□□ 0.91
SMPD3-201ENST00000219334 MKRN3Q13064 507 aaKnown RBP20.75■□□□□ 0.91
SMPD3-201ENST00000219334 BBS5Q8N3I7 341 aa20.75■□□□□ 0.91
SMPD3-201ENST00000219334 AFAP1L1Q8TED9 768 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms