RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 PPP1R3GB7ZBB8 358 aa33.54■■■□□ 2.96
PABPN1-201ENST00000216727 F5H6K3 240 aa33.54■■■□□ 2.96
PABPN1-201ENST00000216727 CD44P16070 742 aaKnown RBP33.54■■■□□ 2.96
PABPN1-201ENST00000216727 KLRC3Q07444 240 aa33.54■■■□□ 2.96
PABPN1-201ENST00000216727 CCDC150Q8NCX0 1101 aa33.54■■■□□ 2.96
PABPN1-201ENST00000216727 AGBL3Q8NEM8 1001 aa33.54■■■□□ 2.96
PABPN1-201ENST00000216727 DPF2Q92785 391 aa33.54■■■□□ 2.96
PABPN1-201ENST00000216727 MTMR9Q96QG7 549 aa33.54■■■□□ 2.96
PABPN1-201ENST00000216727 MAGEF1Q9HAY2 307 aa33.54■■■□□ 2.96
PABPN1-201ENST00000216727 SPDYE2Q495Y8 402 aa33.53■■■□□ 2.96
PABPN1-201ENST00000216727 FKBP1CQ5VVH2 108 aa33.53■■■□□ 2.96
PABPN1-201ENST00000216727 TRMT44Q8IYL2 757 aaKnown RBP33.53■■■□□ 2.96
PABPN1-201ENST00000216727 MTMR14Q8NCE2 650 aa33.53■■■□□ 2.96
PABPN1-201ENST00000216727 PIM2Q9P1W9 311 aa33.53■■■□□ 2.96
PABPN1-201ENST00000216727 ARFGEF1Q9Y6D6 1849 aa33.53■■■□□ 2.96
PABPN1-201ENST00000216727 GH2P01242 217 aa33.53■■■□□ 2.96
PABPN1-201ENST00000216727 SEMA3FQ13275 785 aa33.53■■■□□ 2.96
PABPN1-201ENST00000216727 QRICH1Q2TAL8 776 aa33.53■■■□□ 2.96
PABPN1-201ENST00000216727 SPATA1Q5VX52 437 aa33.53■■■□□ 2.96
PABPN1-201ENST00000216727 NIM1KQ8IY84 436 aa33.53■■■□□ 2.96
PABPN1-201ENST00000216727 IGSF22Q8N9C0 903 aa33.53■■■□□ 2.96
PABPN1-201ENST00000216727 RASSF8Q8NHQ8 419 aa33.53■■■□□ 2.96
PABPN1-201ENST00000216727 PSTPIP2Q9H939 334 aa33.53■■■□□ 2.96
PABPN1-201ENST00000216727 TCP10L2B9ZVM9 353 aa33.52■■■□□ 2.96
PABPN1-201ENST00000216727 EDIL3O43854 480 aa33.52■■■□□ 2.96
PABPN1-201ENST00000216727 CCZ1BP86790 482 aa33.52■■■□□ 2.96
PABPN1-201ENST00000216727 CCZ1P86791 482 aaPredicted RBP33.52■■■□□ 2.96
PABPN1-201ENST00000216727 POTEDQ86YR6 584 aa33.52■■■□□ 2.96
PABPN1-201ENST00000216727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP33.52■■■□□ 2.96
PABPN1-201ENST00000216727 KBTBD4Q9NVX7 518 aa33.52■■■□□ 2.96
PABPN1-201ENST00000216727 R3HCC1Q9Y3T6 440 aaKnown RBP33.52■■■□□ 2.96
PABPN1-201ENST00000216727 JAG1P78504 1218 aa33.52■■■□□ 2.96
PABPN1-201ENST00000216727 PPP4R3AQ6IN85 833 aa33.52■■■□□ 2.96
PABPN1-201ENST00000216727 CABP7Q86V35 215 aa33.52■■■□□ 2.96
PABPN1-201ENST00000216727 FBXO41Q8TF61 875 aa33.52■■■□□ 2.96
PABPN1-201ENST00000216727 RAD21O60216 631 aa33.51■■■□□ 2.95
PABPN1-201ENST00000216727 RPN1P04843 607 aaKnown RBP33.51■■■□□ 2.95
PABPN1-201ENST00000216727 SKILP12757 684 aa33.51■■■□□ 2.95
PABPN1-201ENST00000216727 RRP1BQ14684 758 aaKnown RBP33.51■■■□□ 2.95
PABPN1-201ENST00000216727 DNTTIP2Q5QJE6 756 aaKnown RBP33.51■■■□□ 2.95
PABPN1-201ENST00000216727 ZBTB12Q9Y330 459 aaPredicted RBP33.51■■■□□ 2.95
PABPN1-201ENST00000216727 SYNRGQ9UMZ2 1314 aa33.5■■■□□ 2.95
PABPN1-201ENST00000216727 CLRN2A0PK11 232 aa33.5■■■□□ 2.95
PABPN1-201ENST00000216727 NDUFB10O96000 172 aa33.5■■■□□ 2.95
PABPN1-201ENST00000216727 CDC37Q16543 378 aaPredicted RBP33.5■■■□□ 2.95
PABPN1-201ENST00000216727 CALCRLQ16602 461 aa33.5■■■□□ 2.95
PABPN1-201ENST00000216727 ZNF658Q5TYW1 1059 aaPredicted RBP33.5■■■□□ 2.95
PABPN1-201ENST00000216727 VSTM4Q8IW00 320 aa33.5■■■□□ 2.95
PABPN1-201ENST00000216727 GOLGB1Q14789 3259 aaKnown RBP33.5■■■□□ 2.95
PABPN1-201ENST00000216727 CDK11BP21127 795 aaKnown RBP33.5■■■□□ 2.95
PABPN1-201ENST00000216727 FXR2P51116 673 aaKnown RBP eCLIP33.5■■■□□ 2.95
PABPN1-201ENST00000216727 TECP42680 631 aa33.49■■■□□ 2.95
PABPN1-201ENST00000216727 TNNI2P48788 182 aa33.49■■■□□ 2.95
PABPN1-201ENST00000216727 UBE2SQ16763 222 aa33.49■■■□□ 2.95
PABPN1-201ENST00000216727 SAMSN1Q9NSI8 373 aaKnown RBP33.49■■■□□ 2.95
PABPN1-201ENST00000216727 ATF5Q9Y2D1 282 aaPredicted RBP33.49■■■□□ 2.95
PABPN1-201ENST00000216727 CNTNAP1P78357 1384 aa33.49■■■□□ 2.95
PABPN1-201ENST00000216727 PCDHA1Q9Y5I3 950 aa33.48■■■□□ 2.95
PABPN1-201ENST00000216727 KCNB1Q14721 858 aa33.48■■■□□ 2.95
PABPN1-201ENST00000216727 ARMCX5Q6P1M9 558 aa33.48■■■□□ 2.95
PABPN1-201ENST00000216727 SMYD4Q8IYR2 804 aaPredicted RBP33.48■■■□□ 2.95
PABPN1-201ENST00000216727 INTS13Q9NVM9 706 aa33.48■■■□□ 2.95
PABPN1-201ENST00000216727 SLC37A4O43826 429 aa33.47■■■□□ 2.95
PABPN1-201ENST00000216727 TDP2O95551 362 aa33.47■■■□□ 2.95
PABPN1-201ENST00000216727 SFPQP23246 707 aaKnown RBP eCLIP33.47■■■□□ 2.95
PABPN1-201ENST00000216727 KLHL10Q6JEL2 608 aa33.47■■■□□ 2.95
PABPN1-201ENST00000216727 PLCG1P19174 1290 aa33.46■■■□□ 2.95
PABPN1-201ENST00000216727 BTNL9Q6UXG8 535 aa33.46■■■□□ 2.95
PABPN1-201ENST00000216727 NAP1L4Q99733 375 aaKnown RBP33.46■■■□□ 2.95
PABPN1-201ENST00000216727 BMP3P12645 472 aa33.46■■■□□ 2.95
PABPN1-201ENST00000216727 GCFC2P16383 781 aaKnown RBP33.46■■■□□ 2.95
PABPN1-201ENST00000216727 PDIA5Q14554 519 aa33.46■■■□□ 2.95
PABPN1-201ENST00000216727 TMEM266Q2M3C6 531 aa33.46■■■□□ 2.95
PABPN1-201ENST00000216727 FAM83AQ86UY5 434 aa33.46■■■□□ 2.95
PABPN1-201ENST00000216727 MMTAG2Q9BU76 263 aaKnown RBP33.46■■■□□ 2.95
PABPN1-201ENST00000216727 TXKP42681 527 aa33.45■■■□□ 2.95
PABPN1-201ENST00000216727 CDKAL1Q5VV42 579 aa33.45■■■□□ 2.95
PABPN1-201ENST00000216727 LRRC15Q8TF66 581 aa33.45■■■□□ 2.95
PABPN1-201ENST00000216727 RAB34Q9BZG1 259 aa33.45■■■□□ 2.95
PABPN1-201ENST00000216727 RWDD2AQ9UIY3 292 aa33.45■■■□□ 2.95
PABPN1-201ENST00000216727 A0A1W2PRG0 241 aa33.45■■■□□ 2.94
PABPN1-201ENST00000216727 TBC1D12O60347 775 aa33.45■■■□□ 2.94
PABPN1-201ENST00000216727 CXCL9Q07325 125 aa33.45■■■□□ 2.94
PABPN1-201ENST00000216727 ZBED3Q96IU2 234 aaPredicted RBP33.45■■■□□ 2.94
PABPN1-201ENST00000216727 AMNQ9BXJ7 453 aa33.45■■■□□ 2.94
PABPN1-201ENST00000216727 HSP90AA4PQ58FG1 418 aa33.44■■■□□ 2.94
PABPN1-201ENST00000216727 DALRD3Q5D0E6 543 aaKnown RBP33.44■■■□□ 2.94
PABPN1-201ENST00000216727 SYDE2Q5VT97 1194 aa33.44■■■□□ 2.94
PABPN1-201ENST00000216727 KCND1Q9NSA2 647 aa33.44■■■□□ 2.94
PABPN1-201ENST00000216727 CCDC125Q86Z20 511 aa33.43■■■□□ 2.94
PABPN1-201ENST00000216727 CALML4Q96GE6 196 aa33.43■■■□□ 2.94
PABPN1-201ENST00000216727 ARHGEF10LQ9HCE6 1279 aa33.43■■■□□ 2.94
PABPN1-201ENST00000216727 TMEM232C9JQI7 657 aa33.43■■■□□ 2.94
PABPN1-201ENST00000216727 ZBTB7AO95365 584 aa33.43■■■□□ 2.94
PABPN1-201ENST00000216727 STX17P56962 302 aa33.43■■■□□ 2.94
PABPN1-201ENST00000216727 MCTP2Q6DN12 878 aa33.43■■■□□ 2.94
PABPN1-201ENST00000216727 PLIN2Q99541 437 aa33.43■■■□□ 2.94
PABPN1-201ENST00000216727 NUP88Q99567 741 aaPredicted RBP33.43■■■□□ 2.94
PABPN1-201ENST00000216727 LRWD1Q9UFC0 647 aa33.43■■■□□ 2.94
PABPN1-201ENST00000216727 KLRC4O43908 158 aa33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms