RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 KRT4P19013 534 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 TMOD1P28289 359 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 IFNA8P32881 189 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 DMP1Q13316 513 aaPredicted RBP15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 POTEBQ6S5H4 581 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 WDR91A4D1P6 747 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 GUCY2DQ02846 1103 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 DEPDC1BQ8WUY9 529 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 SNX19Q92543 992 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 DAPK1P53355 1430 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 TTI1O43156 1089 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 TEX9Q8N6V9 391 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 PHACTR3Q96KR7 559 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 RNASELQ05823 741 aaKnown RBP15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 KCNA1Q09470 495 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 KLC3Q6P597 504 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 ZSCAN9O15535 394 aaPredicted RBP15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 PDE11AQ9HCR9 933 aa15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 DDX28Q9NUL7 540 aaKnown RBP15.89■□□□□ 0.13
SPTLC2-201ENST00000216484 MECOMQ03112 1051 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 TMED2Q15363 201 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 TAGAPQ8N103 731 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 ARHGEF1Q92888 912 aaKnown RBP15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 BTN2A2Q8WVV5 523 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 DBNLQ9UJU6 430 aaKnown RBP15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 ORC4O43929 436 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 CFBP00751 764 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 TRMT44Q8IYL2 757 aaKnown RBP15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 TTLL11Q8NHH1 800 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 B4GALNT2Q8NHY0 566 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 NAF1Q96HR8 494 aaKnown RBP15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 CCDC90BQ9GZT6 254 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 SLC1A4P43007 532 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 NSFP46459 744 aaKnown RBP15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 ARHGEF16Q5VV41 709 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 TRIM67Q6ZTA4 783 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 TTC6Q86TZ1 520 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 PNOCQ13519 176 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 GIPC2Q8TF65 315 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 INPP5FQ9Y2H2 1132 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 EMILIN1Q9Y6C2 1016 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 V9GY48 417 aaPredicted RBP15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 KDRP35968 1356 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 PSDA5PKW4 1024 aaPredicted RBP15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 MBD4O95243 580 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 SOX5P35711 763 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 RFX6Q8HWS3 928 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 PHKBQ93100 1093 aa15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 INTS4Q96HW7 963 aaKnown RBP15.88■□□□□ 0.13
SPTLC2-201ENST00000216484 ZNF263O14978 683 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 GAS7O60861 476 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 NBPF10Q6P3W6 841 aaKnown RBP15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 CFAP36Q96G28 342 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 ZNF229Q9UJW7 825 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 SYNJ2O15056 1496 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 RPS6KB1P23443 525 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 MSH2P43246 934 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 TFCP2Q12800 502 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 THOC5Q13769 683 aaKnown RBP15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 HYOU1Q9Y4L1 999 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 FRA10AC1Q70Z53 315 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 EPAS1Q99814 870 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 DESI2Q9BSY9 194 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 RTEL1Q9NZ71 1219 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 TTC41PQ6P2S7 1318 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 KRT87PA6NCN2 255 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 KCNJ18B7U540 433 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 ADCY7P51828 1080 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 UBE3AQ05086 875 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 KCNJ12Q14500 433 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 NLRX1Q86UT6 975 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 MIS12Q9H081 205 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 ATG3Q9NT62 314 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 PSMC1P62191 440 aaKnown RBP15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 TTC25Q96NG3 672 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 SMYD3Q9H7B4 428 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 HESX1Q9UBX0 185 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 TLK1Q9UKI8 766 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 KDM3AQ9Y4C1 1321 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 EIF3CLB5ME19 914 aaKnown RBP15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 HDAC1Q13547 482 aaPredicted RBP15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 EFCAB13Q8IY85 973 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 BBOF1Q8ND07 529 aa15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 EIF3CQ99613 913 aaKnown RBP15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 MYH9P35579 1960 aaKnown RBP15.87■□□□□ 0.13
SPTLC2-201ENST00000216484 hCG_2014768A0A024R1R8 64 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 TRPV6Q9H1D0 765 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 ACTN1P12814 892 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 TPTE2Q6XPS3 522 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 HIPK4Q8NE63 616 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 CACTINQ8WUQ7 758 aaKnown RBP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 STAMQ92783 540 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 ZFYVE1Q9HBF4 777 aa15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 CHCHD3Q9NX63 227 aaKnown RBP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 AATFQ9NY61 560 aaKnown RBP eCLIP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 PRR23D1E9PI22 279 aaPredicted RBP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 PRR23D2P0DMB1 279 aaPredicted RBP15.86■□□□□ 0.13
SPTLC2-201ENST00000216484 PCGF5Q86SE9 256 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms