RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L3A6NCW0 530 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L4A6NCW7 530 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 GOLGA6L19H0YKK7 550 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 PDGFRBP09619 1106 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 HSD3B2P26439 372 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 ZNF75DP51815 510 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 NLRP12P59046 1061 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 RACK1P63244 317 aaKnown RBP12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 NR5A1Q13285 461 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L2Q6R6M4 530 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L1Q7RTZ2 530 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 MAPKAPK5Q8IW41 473 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 PNMA1Q8ND90 353 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 DYNLL2Q96FJ2 89 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 TUBE1Q9UJT0 475 aa12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 SRPRBQ9Y5M8 271 aaKnown RBP12.06□□□□□ -0.48
APOBEC3D-201ENST00000216099 MMP10P09238 476 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 TSPY3P0CV98 308 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 TSPY8P0CW00 308 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 NPY5RQ15761 445 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 LZTS2Q9BRK4 669 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 SEPT3Q9UH03 358 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 DAGLAQ9Y4D2 1042 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 SCN9AQ15858 1988 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 SIPA1L1O43166 1804 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 CFAP69A5D8W1 941 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 TRIM75PA6NK02 468 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L15C9J2P7 530 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L10C9JJH3 530 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L13C9JLJ4 530 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L11C9JVI0 530 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L18D6R9N7 530 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L22D6RA61 530 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L17D6RBQ6 530 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L19D6RCP7 530 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L20D6RJB6 530 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 CALML3P27482 149 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 TRAPPC10P48553 1259 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 NOVP48745 357 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 PLCD1P51178 756 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 USP17L24Q0WX57 530 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 ELOAQ14241 798 aaKnown RBP12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 STYK1Q6J9G0 422 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 CREBRFQ8IUR6 639 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 DHX40Q8IX18 779 aaKnown RBP12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 NEDD1Q8NHV4 660 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 EYA3Q99504 573 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 ZC3H12CQ9C0D7 883 aaKnown RBP12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 COMMD10Q9Y6G5 202 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 MYO3BQ8WXR4 1341 aa12.05□□□□□ -0.48
APOBEC3D-201ENST00000216099 LDHAP00338 332 aaKnown RBP12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 DSG3P32926 999 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 CDK8P49336 464 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 GTF2IP78347 998 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 MAP3K9P80192 1104 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 ZRSR1Q15695 479 aaKnown RBP12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 TTC39BQ5VTQ0 682 aaPredicted RBP12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 DPP8Q6V1X1 898 aaPredicted RBP12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 TCEAL9Q9UHQ7 104 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 SAP30BPQ9UHR5 308 aaKnown RBP12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 KCNH3Q9ULD8 1083 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 PCDHB6Q9Y5E3 794 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 UQCRHLA0A096LP55 91 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 UQCRHP07919 91 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 RXRBP28702 533 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 FKBP1AP62942 108 aaKnown RBP12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 GET4Q7L5D6 327 aaPredicted RBP12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 SLC39A13Q96H72 371 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 CLIC6Q96NY7 704 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 CABP5Q9NP86 173 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 HOOK1Q9UJC3 728 aaKnown RBP12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 ARFGEF1Q9Y6D6 1849 aa12.04□□□□□ -0.48
APOBEC3D-201ENST00000216099 SMARCA1P28370 1054 aa12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 KIAA2012Q0VF49 1180 aa12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 DHX8Q14562 1220 aaKnown RBP12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 UTP14CQ5TAP6 766 aaKnown RBP12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 GLYCTKQ8IVS8 523 aa12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 FERMT2Q96AC1 680 aa12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 MRFAP1L1Q96HT8 127 aa12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 MAD2L2Q9UI95 211 aa12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 ZHX1Q9UKY1 873 aaPredicted RBP12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 BECN2A8MW95 431 aa12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 DYNC1I1O14576 645 aa12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 KCNH2Q12809 1159 aa12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 C10orf62Q5T681 223 aaPredicted RBP12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 GALNT17Q6IS24 598 aa12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 HHIPL2Q6UWX4 724 aa12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 DAGLBQ8NCG7 672 aa12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 TRIM5Q9C035 493 aa12.03□□□□□ -0.48
APOBEC3D-201ENST00000216099 RIMBP2O15034 1052 aa12.02□□□□□ -0.48
APOBEC3D-201ENST00000216099 SLC44A5Q8NCS7 719 aa12.02□□□□□ -0.48
APOBEC3D-201ENST00000216099 TMEM47Q9BQJ4 181 aa12.02□□□□□ -0.48
APOBEC3D-201ENST00000216099 MKNK1Q9BUB5 465 aa12.02□□□□□ -0.48
APOBEC3D-201ENST00000216099 SPZ1Q9BXG8 430 aa12.02□□□□□ -0.48
APOBEC3D-201ENST00000216099 IKBKBO14920 756 aa12.02□□□□□ -0.49
APOBEC3D-201ENST00000216099 STK10O94804 968 aaKnown RBP12.02□□□□□ -0.49
APOBEC3D-201ENST00000216099 TOP1P11387 765 aaKnown RBP12.02□□□□□ -0.49
APOBEC3D-201ENST00000216099 NLRP5P59047 1200 aa12.02□□□□□ -0.49
APOBEC3D-201ENST00000216099 SEMA3FQ13275 785 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms