RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 OXER1Q8TDS5 423 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 SLC38A10Q9HBR0 1119 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 CTDP1Q9Y5B0 961 aaPredicted RBP11.43□□□□□ -0.58
RTCB-201ENST00000216038 BRD1O95696 1058 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 MMP1P03956 469 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 ZSCAN22P10073 491 aaPredicted RBP11.43□□□□□ -0.58
RTCB-201ENST00000216038 XBP1P17861 261 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 HOXA7P31268 230 aaPredicted RBP11.43□□□□□ -0.58
RTCB-201ENST00000216038 NR5A1Q13285 461 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 FAM173BQ6P4H8 233 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 PAGR1Q9BTK6 254 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 PHF20Q9BVI0 1012 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 AMNQ9BXJ7 453 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 CREBZFQ9NS37 354 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 HOXC10Q9NYD6 342 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 ZNF536O15090 1300 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 TCHHQ07283 1943 aa11.43□□□□□ -0.58
RTCB-201ENST00000216038 SMCO2A6NFE2 343 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 BTBD18B2RXH4 712 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 KIF28PB7ZC32 967 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 AOC2O75106 756 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 ZBED4O75132 1171 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 HERVK_113P62684 666 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 TMEM132BQ14DG7 1078 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 NPY5RQ15761 445 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 DEFB115Q30KQ5 88 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 DIS3L2Q8IYB7 885 aaKnown RBP11.42□□□□□ -0.58
RTCB-201ENST00000216038 RASGRP4Q8TDF6 673 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 CCDC102AQ96A19 550 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 FAM13BQ9NYF5 915 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 CCPG1Q9ULG6 757 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 WDR33Q9C0J8 1336 aaKnown RBP11.42□□□□□ -0.58
RTCB-201ENST00000216038 IGF2BP3O00425 579 aaKnown RBP eCLIP11.42□□□□□ -0.58
RTCB-201ENST00000216038 ALAS1P13196 640 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 NUCB2P80303 420 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 GNL2Q13823 731 aaKnown RBP11.42□□□□□ -0.58
RTCB-201ENST00000216038 NOM1Q5C9Z4 860 aaKnown RBP11.42□□□□□ -0.58
RTCB-201ENST00000216038 GTPBP4Q9BZE4 634 aaKnown RBP11.42□□□□□ -0.58
RTCB-201ENST00000216038 BTBD7Q9P203 1132 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 RIPK3Q9Y572 518 aa11.42□□□□□ -0.58
RTCB-201ENST00000216038 F13A1P00488 732 aa11.41□□□□□ -0.58
RTCB-201ENST00000216038 ICAM1P05362 532 aa11.41□□□□□ -0.58
RTCB-201ENST00000216038 OSBPP22059 807 aa11.41□□□□□ -0.58
RTCB-201ENST00000216038 KIF23Q02241 960 aaPredicted RBP11.41□□□□□ -0.58
RTCB-201ENST00000216038 PABPC4Q13310 644 aaKnown RBP eCLIP11.41□□□□□ -0.586e-7■■■■□ 25.8
RTCB-201ENST00000216038 UBE2SQ16763 222 aa11.41□□□□□ -0.58
RTCB-201ENST00000216038 SNRNP48Q6IEG0 339 aaKnown RBP11.41□□□□□ -0.58
RTCB-201ENST00000216038 REPS2Q8NFH8 660 aa11.41□□□□□ -0.58
RTCB-201ENST00000216038 SMCR8Q8TEV9 937 aaPredicted RBP11.41□□□□□ -0.58
RTCB-201ENST00000216038 CAPNS2Q96L46 248 aa11.41□□□□□ -0.58
RTCB-201ENST00000216038 TXNRD2Q9NNW7 524 aa11.41□□□□□ -0.58
RTCB-201ENST00000216038 SH3GLB2Q9NR46 395 aa11.41□□□□□ -0.58
RTCB-201ENST00000216038 ZNF214Q9UL59 606 aaPredicted RBP11.41□□□□□ -0.58
RTCB-201ENST00000216038 NOL7Q9UMY1 257 aaKnown RBP11.41□□□□□ -0.58
RTCB-201ENST00000216038 ADAMTS5Q9UNA0 930 aa11.41□□□□□ -0.58
RTCB-201ENST00000216038 FAM205CA6NFA0 338 aa11.4□□□□□ -0.58
RTCB-201ENST00000216038 MANSC4A6NHS7 340 aaPredicted RBP11.4□□□□□ -0.58
RTCB-201ENST00000216038 OPLAHO14841 1288 aa11.4□□□□□ -0.58
RTCB-201ENST00000216038 SAFBQ15424 915 aaKnown RBP eCLIP11.4□□□□□ -0.58
RTCB-201ENST00000216038 TAF3Q5VWG9 929 aa11.4□□□□□ -0.58
RTCB-201ENST00000216038 USP17L6PQ6QN14 398 aa11.4□□□□□ -0.58
RTCB-201ENST00000216038 CCDC148Q8NFR7 591 aa11.4□□□□□ -0.58
RTCB-201ENST00000216038 TBC1D5Q92609 795 aa11.4□□□□□ -0.58
RTCB-201ENST00000216038 TNPO1Q92973 898 aaKnown RBP11.4□□□□□ -0.58
RTCB-201ENST00000216038 HHIPL1Q96JK4 782 aa11.4□□□□□ -0.58
RTCB-201ENST00000216038 CCDC94Q9BW85 323 aaPredicted RBP11.4□□□□□ -0.58
RTCB-201ENST00000216038 ZMYND12Q9H0C1 365 aa11.4□□□□□ -0.58
RTCB-201ENST00000216038 PSTPIP2Q9H939 334 aa11.4□□□□□ -0.58
RTCB-201ENST00000216038 BIN2Q9UBW5 565 aaPredicted RBP11.4□□□□□ -0.58
RTCB-201ENST00000216038 RASSF10A6NK89 507 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 NFIBO00712 420 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.59
RTCB-201ENST00000216038 HOXA13P31271 388 aaPredicted RBP11.4□□□□□ -0.59
RTCB-201ENST00000216038 KRT2P35908 639 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 NASPP49321 788 aaPredicted RBP11.4□□□□□ -0.59
RTCB-201ENST00000216038 ADCY7P51828 1080 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 MUM1L1Q5H9M0 696 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 EARS2Q5JPH6 523 aaKnown RBP11.4□□□□□ -0.59
RTCB-201ENST00000216038 LBX2Q6XYB7 198 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 ANKRD23Q86SG2 305 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 BLIDQ8IZY5 108 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 CCDC12Q8WUD4 166 aaPredicted RBP11.4□□□□□ -0.59
RTCB-201ENST00000216038 PGBD1Q96JS3 809 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 R3HDMLQ9H3Y0 253 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 C6orf50Q9HD87 102 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 TMEM260Q9NX78 707 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 RBPJLQ9UBG7 517 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 PCDHA4Q9UN74 947 aa11.4□□□□□ -0.59
RTCB-201ENST00000216038 MYPNQ86TC9 1320 aa11.39□□□□□ -0.59
RTCB-201ENST00000216038 hCG_1984214I3L0E3 225 aa11.39□□□□□ -0.59
RTCB-201ENST00000216038 CFBP00751 764 aa11.39□□□□□ -0.59
RTCB-201ENST00000216038 STAT3P40763 770 aa11.39□□□□□ -0.59
RTCB-201ENST00000216038 RESTQ13127 1097 aa11.39□□□□□ -0.59
RTCB-201ENST00000216038 Q3C1V9 767 aa11.39□□□□□ -0.59
RTCB-201ENST00000216038 JAKMIP3Q5VZ66 844 aa11.39□□□□□ -0.59
RTCB-201ENST00000216038 ANKRD13CQ8N6S4 541 aa11.39□□□□□ -0.59
RTCB-201ENST00000216038 ZNF713Q8N859 430 aaPredicted RBP11.39□□□□□ -0.59
RTCB-201ENST00000216038 TRERF1Q96PN7 1200 aa11.39□□□□□ -0.59
RTCB-201ENST00000216038 PNMA3Q9UL41 463 aa11.39□□□□□ -0.59
RTCB-201ENST00000216038 TESPA1A2RU30 521 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms