RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 RAB20Q9NX57 234 aa6.62□□□□□ -1.35
VPS13D-201ENST00000011700 GSTA1P08263 222 aa6.62□□□□□ -1.35
VPS13D-201ENST00000011700 MMEP08473 750 aa6.62□□□□□ -1.35
VPS13D-201ENST00000011700 GSTA2P09210 222 aa6.62□□□□□ -1.35
VPS13D-201ENST00000011700 TFAP4Q01664 338 aa6.62□□□□□ -1.35
VPS13D-201ENST00000011700 LAMC2Q13753 1193 aa6.62□□□□□ -1.35
VPS13D-201ENST00000011700 LRRC23Q53EV4 343 aaPredicted RBP6.62□□□□□ -1.35
VPS13D-201ENST00000011700 PI4KAP2A4QPH2 592 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 FOSP01100 380 aaPredicted RBP6.61□□□□□ -1.35
VPS13D-201ENST00000011700 ANXA13P27216 316 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 CDR2Q01850 454 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 KCTD17Q8N5Z5 321 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 PI4KAP1Q8N8J0 262 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 GRAMD1AQ96CP6 724 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 ADPGKQ9BRR6 497 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 CYP7A1P22680 504 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 PSMD2Q13200 908 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 ENAHQ8N8S7 591 aaPredicted RBP6.61□□□□□ -1.35
VPS13D-201ENST00000011700 FLAD1Q8NFF5 587 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 MORC4Q8TE76 937 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 ZNF622Q969S3 477 aaKnown RBP eCLIP6.61□□□□□ -1.351e-6■□□□□ 10.3
VPS13D-201ENST00000011700 EPC1Q9H2F5 836 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 HACD3Q9P035 362 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 GPATCH8Q9UKJ3 1502 aaKnown RBP6.61□□□□□ -1.35
VPS13D-201ENST00000011700 ATP2B4P23634 1241 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 SLFNL1Q499Z3 407 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 FSCBQ5H9T9 825 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 RSBN1LQ6PCB5 846 aaPredicted RBP6.61□□□□□ -1.35
VPS13D-201ENST00000011700 BLOC1S6Q9UL45 172 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 NFU1Q9UMS0 254 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 SAMD9Q5K651 1589 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 ABCA9Q8IUA7 1624 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 BACH1O14867 736 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 INHBAP08476 426 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 MCM7P33993 719 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 C6orf118Q5T5N4 469 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 SEPT8Q92599 483 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 APPBP2Q92624 585 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 IVNS1ABPQ9Y6Y0 642 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 RNF17Q9BXT8 1623 aaKnown RBP6.61□□□□□ -1.35
VPS13D-201ENST00000011700 CCDC188H7C350 402 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 DTNBO60941 627 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 PTGS1P23219 599 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 STAMBPL1Q96FJ0 436 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 MAGEB5Q9BZ81 275 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 BATF3Q9NR55 127 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 CNPY2Q9Y2B0 182 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 COL4A3BPQ9Y5P4 624 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 SEMA3EO15041 775 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 PCYT1AP49585 367 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 MRPS25P82663 173 aaKnown RBP6.61□□□□□ -1.35
VPS13D-201ENST00000011700 DNM1Q05193 864 aaKnown RBP6.61□□□□□ -1.35
VPS13D-201ENST00000011700 BIRC2Q13490 618 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 NLRX1Q86UT6 975 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 PDZD8Q8NEN9 1154 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 TNIP2Q8NFZ5 429 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 DNAJC25Q9H1X3 360 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 STOML1Q9UBI4 398 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 ALDH1B1P30837 517 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 ZNF75DP51815 510 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 RASA3Q14644 834 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 GPATCH4Q5T3I0 446 aaKnown RBP6.61□□□□□ -1.35
VPS13D-201ENST00000011700 RASIP1Q5U651 963 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 CASC4Q6P4E1 433 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 DHTKD1Q96HY7 919 aaPredicted RBP6.61□□□□□ -1.35
VPS13D-201ENST00000011700 NDEL1Q9GZM8 345 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 AS3MTQ9HBK9 375 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 MED23Q9ULK4 1368 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 ADGRL2O95490 1459 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 IKBKBO14920 756 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 RCAN1P53805 252 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 OTUD7BQ6GQQ9 843 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 AFAP1Q8N556 730 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 ZFP91Q96JP5 570 aaPredicted RBP6.61□□□□□ -1.35
VPS13D-201ENST00000011700 MCM9Q9NXL9 1143 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 ARMCX3Q9UH62 379 aaPredicted RBP6.61□□□□□ -1.35
VPS13D-201ENST00000011700 A0A1W2PQ27 194 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 A0A1W2PQ64 194 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 A0A1W2PQD8 194 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 KRT87PA6NCN2 255 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 PNMA8AQ86V59 439 aaPredicted RBP6.61□□□□□ -1.35
VPS13D-201ENST00000011700 ZBTB8OSQ8IWT0 167 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 RNF34Q969K3 372 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 TADA1Q96BN2 335 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 VPS39Q96JC1 886 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 KDM4CQ9H3R0 1056 aa6.61□□□□□ -1.35
VPS13D-201ENST00000011700 MAPKBP1O60336 1514 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 PTPDC1A2A3K4 754 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 PRIM1P49642 420 aaKnown RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 PLA2G4DQ86XP0 818 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 PHF8Q9UPP1 1060 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 FRMPD1Q5SYB0 1578 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 CFAP73A6NFT4 308 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 MCF2LO15068 1137 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 MAPK13O15264 365 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 SMIM24O75264 130 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 DCAF15Q66K64 600 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 GPBP1L1Q9HC44 474 aaPredicted RBP6.6□□□□□ -1.35
VPS13D-201ENST00000011700 ATP8A2Q9NTI2 1148 aa6.6□□□□□ -1.35
VPS13D-201ENST00000011700 KIAA1468Q9P260 1216 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms