RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 NPLOC4Q8TAT6 608 aa13.96□□□□□ -0.18
SYPL1-201ENST00000011473 CLEC4DQ8WXI8 215 aa13.96□□□□□ -0.18
SYPL1-201ENST00000011473 RRP36Q96EU6 259 aaKnown RBP13.96□□□□□ -0.18
SYPL1-201ENST00000011473 ZNF274Q96GC6 653 aaPredicted RBP13.96□□□□□ -0.18
SYPL1-201ENST00000011473 PURBQ96QR8 312 aaKnown RBP13.96□□□□□ -0.18
SYPL1-201ENST00000011473 LZTS2Q9BRK4 669 aa13.96□□□□□ -0.18
SYPL1-201ENST00000011473 ALDH8A1Q9H2A2 487 aaPredicted RBP13.96□□□□□ -0.18
SYPL1-201ENST00000011473 A1CFQ9NQ94 594 aaKnown RBP13.96□□□□□ -0.18
SYPL1-201ENST00000011473 PCDHA1Q9Y5I3 950 aa13.96□□□□□ -0.18
SYPL1-201ENST00000011473 CD2BP2O95400 341 aaKnown RBP13.95□□□□□ -0.18
SYPL1-201ENST00000011473 RCAN1P53805 252 aa13.95□□□□□ -0.18
SYPL1-201ENST00000011473 MAP2K5Q13163 448 aa13.95□□□□□ -0.18
SYPL1-201ENST00000011473 ANKRD1Q15327 319 aa13.95□□□□□ -0.18
SYPL1-201ENST00000011473 FBXO46Q6PJ61 603 aaPredicted RBP13.95□□□□□ -0.18
SYPL1-201ENST00000011473 DPP9Q86TI2 863 aa13.95□□□□□ -0.18
SYPL1-201ENST00000011473 CHST13Q8NET6 341 aa13.95□□□□□ -0.18
SYPL1-201ENST00000011473 SOCS4Q8WXH5 440 aa13.95□□□□□ -0.18
SYPL1-201ENST00000011473 USP6NLQ92738 828 aa13.95□□□□□ -0.18
SYPL1-201ENST00000011473 DDX11Q96FC9 970 aa13.95□□□□□ -0.18
SYPL1-201ENST00000011473 AMNQ9BXJ7 453 aa13.95□□□□□ -0.18
SYPL1-201ENST00000011473 V9GY48 417 aaPredicted RBP13.95□□□□□ -0.18
SYPL1-201ENST00000011473 MKI67P46013 3256 aaKnown RBP13.95□□□□□ -0.18
SYPL1-201ENST00000011473 PNMA6FA0A0J9YX94 578 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 SLC15A5A6NIM6 579 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 STRNO43815 780 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 COPB2P35606 906 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 RABEP1Q15276 862 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 NTRK3Q16288 839 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 TBC1D5Q92609 795 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 GPKOWQ92917 476 aaPredicted RBP eCLIP13.94□□□□□ -0.18
SYPL1-201ENST00000011473 SLKQ9H2G2 1235 aaPredicted RBP13.94□□□□□ -0.18
SYPL1-201ENST00000011473 FLRT1Q9NZU1 646 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 SEC63Q9UGP8 760 aaKnown RBP13.94□□□□□ -0.18
SYPL1-201ENST00000011473 DDX49Q9Y6V7 483 aaKnown RBP13.94□□□□□ -0.18
SYPL1-201ENST00000011473 NID2Q14112 1375 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 CCDC196A0A1B0GTZ2 297 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 ADCY3O60266 1144 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 RGS2P41220 211 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 CNTN2Q02246 1040 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 TRIM32Q13049 653 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 SLC30A10Q6XR72 485 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 TRIB2Q92519 343 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 FBXO40Q9UH90 709 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 MGAMO43451 1857 aa13.94□□□□□ -0.18
SYPL1-201ENST00000011473 BAZ2BQ9UIF8 2168 aaKnown RBP13.94□□□□□ -0.18
SYPL1-201ENST00000011473 PTPDC1A2A3K4 754 aa13.93□□□□□ -0.18
SYPL1-201ENST00000011473 OPLAHO14841 1288 aa13.93□□□□□ -0.18
SYPL1-201ENST00000011473 SMARCA1P28370 1054 aa13.93□□□□□ -0.18
SYPL1-201ENST00000011473 SLC9C1Q4G0N8 1177 aa13.93□□□□□ -0.18
SYPL1-201ENST00000011473 HEATR3Q7Z4Q2 680 aa13.93□□□□□ -0.18
SYPL1-201ENST00000011473 APBA2Q99767 749 aa13.93□□□□□ -0.18
SYPL1-201ENST00000011473 SLC26A6Q9BXS9 759 aa13.93□□□□□ -0.18
SYPL1-201ENST00000011473 CYP39A1Q9NYL5 469 aa13.93□□□□□ -0.18
SYPL1-201ENST00000011473 CPLX1O14810 134 aa13.93□□□□□ -0.18
SYPL1-201ENST00000011473 CALML3P27482 149 aa13.93□□□□□ -0.18
SYPL1-201ENST00000011473 GRK4P32298 578 aa13.93□□□□□ -0.18
SYPL1-201ENST00000011473 BAATQ14032 418 aaPredicted RBP13.93□□□□□ -0.18
SYPL1-201ENST00000011473 PKN2Q16513 984 aaKnown RBP13.93□□□□□ -0.18
SYPL1-201ENST00000011473 TKFCQ3LXA3 575 aa13.93□□□□□ -0.18
SYPL1-201ENST00000011473 ABRAQ8N0Z2 381 aa13.93□□□□□ -0.18
SYPL1-201ENST00000011473 SMCHD1A6NHR9 2005 aa13.92□□□□□ -0.18
SYPL1-201ENST00000011473 DOCK3Q8IZD9 2030 aa13.92□□□□□ -0.18
SYPL1-201ENST00000011473 PLXNB2O15031 1838 aa13.92□□□□□ -0.18
SYPL1-201ENST00000011473 ABCB11O95342 1321 aa13.92□□□□□ -0.18
SYPL1-201ENST00000011473 PFKFB2O60825 505 aa13.92□□□□□ -0.18
SYPL1-201ENST00000011473 PRMT2P55345 433 aa13.92□□□□□ -0.18
SYPL1-201ENST00000011473 RPS6P62753 249 aaKnown RBP13.92□□□□□ -0.18
SYPL1-201ENST00000011473 ST3GAL1Q11201 340 aa13.92□□□□□ -0.18
SYPL1-201ENST00000011473 IRF5Q13568 498 aa13.92□□□□□ -0.18
SYPL1-201ENST00000011473 PPP2R5BQ15173 497 aa13.92□□□□□ -0.18
SYPL1-201ENST00000011473 TNS4Q8IZW8 715 aa13.92□□□□□ -0.18
SYPL1-201ENST00000011473 BIN2Q9UBW5 565 aaPredicted RBP13.92□□□□□ -0.18
SYPL1-201ENST00000011473 LIMCH1Q9UPQ0 1083 aa13.92□□□□□ -0.18
SYPL1-201ENST00000011473 ASTN1O14525 1302 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 DNAJC25-GNG10A0A024R161 153 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 CFBP00751 764 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 IFNAR1P17181 557 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 HOXA13P31271 388 aaPredicted RBP13.91□□□□□ -0.18
SYPL1-201ENST00000011473 ZNF792Q3KQV3 632 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 WWC2Q6AWC2 1192 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 TYW1BQ6NUM6 668 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 RNF207Q6ZRF8 634 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 GTF3C6Q969F1 213 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 MAML3Q96JK9 1138 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 MRPL11Q9Y3B7 192 aaKnown RBP13.91□□□□□ -0.18
SYPL1-201ENST00000011473 POTEB2H3BUK9 544 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 ST18O60284 1047 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 CTDNEP1O95476 244 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 HOXC6P09630 235 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 XRCC5P13010 732 aaKnown RBP13.91□□□□□ -0.18
SYPL1-201ENST00000011473 CYP2C19P33261 490 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 PKN1Q16512 942 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 FGD4Q96M96 766 aa13.91□□□□□ -0.18
SYPL1-201ENST00000011473 INHAP05111 366 aa13.9□□□□□ -0.18
SYPL1-201ENST00000011473 CCDC83Q8IWF9 413 aa13.9□□□□□ -0.18
SYPL1-201ENST00000011473 SLAIN1Q8ND83 568 aa13.9□□□□□ -0.18
SYPL1-201ENST00000011473 COL20A1Q9P218 1284 aa13.9□□□□□ -0.18
SYPL1-201ENST00000011473 PNMA2Q9UL42 364 aa13.9□□□□□ -0.18
SYPL1-201ENST00000011473 PFASO15067 1338 aa13.9□□□□□ -0.18
SYPL1-201ENST00000011473 SOWAHBA6NEL2 793 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms