RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Tmtc2Q56A06 836 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 BcrQ6PAJ1 1270 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Plcg2Q8CIH5 1265 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Tob2Q9JM55 345 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Scn3aA2ASI5 1947 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 OgdhlE9Q7L0 1029 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Gjd2O54851 321 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Psen1P49769 467 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Rps6P62754 249 aaKnown RBP9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Ckap2Q3V1H1 664 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Islr2Q5RKR3 745 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Igf2bp2Q5SF07 592 aaKnown RBP9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Kif1bpQ6ZPU9 617 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 RnpepQ8VCT3 650 aaKnown RBP9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 ZwintQ9CQU5 252 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Katnbl1Q9CWJ3 299 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Gm5114W4VSN8 858 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Usp31E9Q6Y8 1344 aa9.56□□□□□ -0.88
Trim39-205ENSMUST00000173369 Ripor3A1L3T7 938 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Fam43bA2AM80 330 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Eef2kO08796 724 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Limch1Q3UH68 1057 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Slc27a1Q60714 646 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Stxbp3Q60770 592 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Ccdc82Q6PG04 518 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Acat1Q8QZT1 424 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Ivns1abpQ920Q8 642 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Dph6Q9CQ28 267 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Adgrf4Q9D2L6 698 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Psmd10Q9Z2X2 231 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Gm15448F6PZL4 682 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Tmem132bF7BAB2 1078 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Terf2O35144 541 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Foxp1P58462 705 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Mre11Q61216 706 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Atg4cQ811C2 458 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Hsdl1Q8BTX9 330 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Amer2Q8CCJ4 672 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Ccdc38Q8CDN8 563 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Fam114a1Q9D281 569 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Mad1l1Q9WTX8 717 aaKnown RBP9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Thsd7bQ6P4U0 1607 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Col2a1P28481 1487 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Szt2A2A9C3 3431 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Gucy1a2F8VQK3 730 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 GnaqP21279 359 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Itgb7P26011 806 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 PrkczQ02956 592 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Cdc14aQ6GQT0 603 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Vgll2Q8BGW8 322 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Sec62Q8BU14 398 aaKnown RBP9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Bcas3Q8CCN5 928 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 SerhlQ9EPB5 311 aa9.55□□□□□ -0.88
Trim39-205ENSMUST00000173369 Cpb1B2RS76 415 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Tpd52Q62393 224 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Ppm1eQ80TL0 749 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Slitrk3Q810B9 980 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Kiaa1524Q8BWY9 907 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 PdgfcQ8CI19 345 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 MyripQ8K3I4 856 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Gprc5cQ8K3J9 440 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Dcaf8Q8N7N5 591 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Slc12a8Q8VI23 705 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Apobec3Q99J72 440 aaKnown RBP9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Ralgps2Q9ERD6 590 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 PfasQ5SUR0 1337 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Pfkfb3A7UAK5 555 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 EporP14753 507 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Kifap3P70188 793 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Ppm1jQ149T7 507 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Fam89aQ14BJ1 175 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Kmt5bQ3U8K7 883 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Slc16a10Q3U9N9 512 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Ece1Q4PZA2 769 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Zfp90Q61967 636 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Ddrgk1Q80WW9 315 aa9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 NkapQ9D0F4 415 aaKnown RBP9.54□□□□□ -0.88
Trim39-205ENSMUST00000173369 Gm7356A0A087WSA6 508 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Gm15262A0A140LIQ5 728 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 CatspereP0DP43 985 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Wnt7aP24383 349 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Traf1P39428 409 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Syt2P46097 422 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Rnf157Q3TEL6 685 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Gse1Q3U3C9 1213 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Eif3j2Q66JS6 263 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Zfp251Q6PCX8 632 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Casc1Q6TDU8 730 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Sap130Q8BIH0 1057 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Cdan1Q8CC12 1239 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Mettl16Q9CQG2 553 aaKnown RBP9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Oip5A2AQ14 241 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Zhx1P70121 873 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Cdkl5Q3UTQ8 938 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Senp7Q8BUH8 1037 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Plcd1Q8R3B1 756 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Bhmt2Q91WS4 363 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Gtpbp4Q99ME9 634 aaKnown RBP9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 Saal1Q9D2C2 474 aa9.53□□□□□ -0.88
Trim39-205ENSMUST00000173369 ArcQ9WV31 396 aa9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms