RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Gpr161B2RPY5 545 aa12.8□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Ccdc13D3YV10 709 aa12.8□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Nedd9O35177 833 aa12.8□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Gad1P48318 593 aa12.8□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Asap2Q7SIG6 958 aa12.8□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Lmbrd1Q8K0B2 537 aa12.8□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Rwdd2aQ9D9S3 292 aa12.8□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Ddx23D3Z0M9 819 aaKnown RBP12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Pik3caP42337 1068 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Acot10Q32MW3 439 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Haus7Q8BKT8 364 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Tmem119Q8R138 280 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Dbndd2Q9CRD4 158 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 DexiQ9WUQ7 95 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Sept3Q9Z1S5 350 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Pus7B7ZNL8 666 aaKnown RBP12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Tarbp1E9Q368 1579 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Dzip1lQ499E4 774 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Meis1Q60954 390 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Rbm12b2Q66JV4 834 aaKnown RBP12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Glrx3Q9CQM9 337 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Gpaa1Q9WTK3 621 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Fyb2A2A995 729 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Prdm11A2AGX3 565 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Mroh7A2AVR2 1279 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Erich2E9Q1A6 463 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Nub1P54729 614 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Pde1bQ01065 535 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Usp49Q6P9L4 685 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Cep104Q80V31 926 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Tada3Q8R0L9 432 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Mrps9Q9D7N3 390 aaKnown RBP12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Col15a1O35206 1367 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Gm4340L7N2C4 268 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Eno1P17182 434 aaKnown RBP12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Adssl1P28650 457 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Fen1P39749 378 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Chp1P61022 195 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Dpf2Q61103 391 aaKnown RBP12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 NfrkbQ6PIJ4 1296 aaKnown RBP12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Slc7a6osQ7TPE5 306 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 C130026I21RikQ8C898 291 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Tbc1d23Q8K0F1 684 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Adarb2Q9JI20 745 aa12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Fam208aQ69ZR9 1610 aaKnown RBP12.79□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Grin2dQ03391 1323 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Krt78E9Q0F0 1068 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Trappc10Q3TLI0 1259 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Arid3aQ62431 601 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Otop3Q80UF9 577 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Rcor2Q8C796 523 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Fam114a2Q8VE88 497 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Apopt1Q9CQW7 192 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 3830403N18RikQ9D6C3 208 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Zcchc11B2RX14 1644 aaKnown RBP12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Lbhd1A0A087WPA0 259 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 DesP31001 469 aaKnown RBP12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Tmod1P49813 359 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Ccdc189Q6NZQ0 333 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Sdccag8Q80UF4 717 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Dpp8Q80YA7 892 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Phf20l1Q8CCJ9 1013 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Arhgap18Q8K0Q5 663 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Cgref1Q8R1U2 281 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Zcrb1Q9CZ96 217 aaKnown RBP12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Rsph3bQ9DA80 389 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 FliiQ9JJ28 1271 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 1700016G14RikA0A286YCZ6 238 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Gm1661E9Q963 441 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Slc39a2G3X943 309 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Fermt1P59113 677 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Nhej1Q3KNJ2 295 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Krt9Q6RHW0 743 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Znf365Q8BG89 408 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 HibadhQ99L13 335 aaKnown RBP12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Iqsec3Q3TES0 1195 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Slc30a9Q5IRJ6 567 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 SkiQ60698 725 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Pcdhb14Q6PB90 796 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Ssfa2Q922B9 1252 aa12.78□□□□□ -0.36
Ndc1-204ENSMUST00000139560 SphkapQ6NSW3 1687 aa12.77□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Col1a2Q01149 1372 aa12.77□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Lrrc32G3XA59 663 aa12.77□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Eif2aQ8BJW6 581 aaKnown RBP12.77□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Vmn1r199Q8R280 367 aa12.77□□□□□ -0.36
Ndc1-204ENSMUST00000139560 Col20a1Q923P0 1320 aa12.77□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Vmn2r68L7N2B3 851 aa12.77□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Surf1P09925 306 aa12.77□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Nap1l4Q78ZA7 375 aaKnown RBP12.77□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Camsap3Q80VC9 1252 aa12.77□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Anks1bQ8BIZ1 1259 aa12.77□□□□□ -0.37
Ndc1-204ENSMUST00000139560 SnrkQ8VDU5 748 aa12.77□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Fsip1Q9D3V5 435 aa12.77□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Eif4g3Q80XI3 1579 aaKnown RBP12.77□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Nr2f2P43135 414 aa12.77□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ankrd13aQ80UP5 588 aa12.77□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Scyl1Q9EQC5 806 aaKnown RBP12.77□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Nr2e3Q9QXZ7 395 aa12.77□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Il7P10168 154 aa12.76□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Il15P48346 162 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms