RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 LtkP08923 888 aa29.05■■■□□ 2.24
Tpm1-216ENSMUST00000113707 LdhbP16125 334 aaKnown RBP29.05■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Fbln1Q08879 705 aa29.05■■■□□ 2.24
Tpm1-216ENSMUST00000113707 AdnpQ9Z103 1108 aaKnown RBP29.05■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Il13ra2O88786 383 aa29.04■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Peg10Q7TN75 958 aaKnown RBP29.04■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Anks1bQ8BIZ1 1259 aa29.04■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Cdc25aP48964 514 aa29.04■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Nek1P51954 1203 aa29.04■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Zc3h15Q3TIV5 426 aaKnown RBP29.04■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Prr7Q3V0I2 269 aa29.04■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Senp6Q6P7W0 1132 aa29.04■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Ccdc122Q8BVN0 290 aa29.04■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Cbx6Q9DBY5 414 aa29.04■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Ulk4Q3V129 1303 aa29.03■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Herc3A6H6S0 1050 aa29.03■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Rsph10bE9PYQ0 876 aa29.03■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Meis2P97367 477 aa29.03■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Havcr2Q8VIM0 281 aa29.03■■■□□ 2.24
Tpm1-216ENSMUST00000113707 IkQ9Z1M8 557 aaKnown RBP29.03■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Jakmip3Q5DTN8 844 aa29.02■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Ankk1Q8BZ25 745 aa29.02■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Phf20l1Q8CCJ9 1013 aa29.02■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Ces1Q8VCC2 565 aa29.02■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Anapc4Q91W96 807 aa29.02■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Sertad1Q9JL10 236 aa29.02■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Cyp2j7A0A140T8U1 504 aa29.02■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Cul4bA2A432 970 aaKnown RBP29.02■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Atp13a3Q5XF89 1219 aa29.02■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Rbm12b2Q66JV4 834 aaKnown RBP29.02■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Shtn1Q8K2Q9 631 aa29.02■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Tlcd1Q99JT6 247 aa29.02■■■□□ 2.24
Tpm1-216ENSMUST00000113707 Magi2Q9WVQ1 1275 aa29.02■■■□□ 2.24
Tpm1-216ENSMUST00000113707 ArsiQ32KI9 573 aa29.01■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Oog3Q3UWY1 500 aa29.01■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Hirip3Q8BLH7 601 aa29.01■■■□□ 2.23
Tpm1-216ENSMUST00000113707 NinQ61043 2035 aa29.01■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Pla2g4bP0C871 782 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Zfp953Q3UPV7 304 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Pnma5Q5DTT8 618 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Tmprss11eQ5S248 423 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Churc1Q6DG52 112 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Adck2Q6NSR3 617 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Sap130Q8BIH0 1057 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Bhmt2Q91WS4 363 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Slc26a4Q9R155 780 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Pcdh11xF6ZNL5 1338 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Akr1c19G3X9Y6 323 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 FosP01101 380 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Msh3P13705 1091 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Tph1P17532 447 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Nucb2P81117 420 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Gm11437Q5QR91 290 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Sval3Q76I99 144 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Tmem87aQ8BXN9 555 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Washc1Q8VDD8 475 aa29■■■□□ 2.23
Tpm1-216ENSMUST00000113707 XdhQ00519 1335 aa28.99■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Gm5737A0A140LI11 423 aa28.99■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Fgfr2P21803 821 aa28.99■■■□□ 2.23
Tpm1-216ENSMUST00000113707 CebpzP53569 1052 aaKnown RBP28.99■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Bbs9Q811G0 885 aa28.99■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Arhgef19Q8BWA8 802 aa28.99■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Pnma3Q8JZW8 466 aa28.99■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Mettl5Q8K1A0 209 aa28.99■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Ifih1Q8R5F7 1025 aa28.99■■■□□ 2.23
Tpm1-216ENSMUST00000113707 4921524L21RikQ9D5T2 438 aa28.99■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Kcnq2Q9Z351 759 aa28.99■■■□□ 2.23
Tpm1-216ENSMUST00000113707 CatspereP0DP43 985 aa28.98■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Cep135Q6P5D4 1140 aa28.98■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Gjd4Q8BSD4 364 aa28.98■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Ildr1Q8CBR1 537 aa28.98■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Dnaaf4Q8R368 420 aa28.98■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Tmx1Q8VBT0 278 aa28.98■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Tdrd1Q99MV1 1172 aa28.98■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Pkd2l2Q9JLG4 621 aa28.98■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Cry2Q9R194 592 aa28.98■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Tmod2Q9JKK7 351 aa28.97■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Adssl1P28650 457 aa28.97■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Traf1P39428 409 aa28.97■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Kcnb1Q03717 857 aa28.97■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Nt5c2Q3V1L4 560 aa28.97■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Asnsd1Q8BFS9 627 aa28.97■■■□□ 2.23
Tpm1-216ENSMUST00000113707 FktnQ8R507 461 aa28.97■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Ppp1r3gQ9CW07 347 aa28.97■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Parp1P11103 1013 aaKnown RBP28.96■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Irf6P97431 467 aa28.96■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Lrrfip1Q3UZ39 729 aaKnown RBP28.96■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Mns1Q61884 491 aa28.96■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Zfp341Q6PGC9 846 aa28.96■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Phf20Q8BLG0 1010 aaKnown RBP28.96■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Ccdc38Q8CDN8 563 aa28.96■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Krt79Q8VED5 531 aa28.96■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Ascc2Q91WR3 749 aa28.96■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Tab2Q99K90 693 aa28.96■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Apol7aB2RT54 418 aa28.95■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Lrch1P62046 709 aa28.95■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Kifap3P70188 793 aa28.95■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Krt39Q6IFX4 482 aa28.95■■■□□ 2.23
Tpm1-216ENSMUST00000113707 C8aQ8K182 587 aa28.95■■■□□ 2.23
Tpm1-216ENSMUST00000113707 Kbtbd4Q8R179 534 aa28.95■■■□□ 2.23
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms