RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Usp14Q9JMA1 493 aaKnown RBP24.03■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 PatjQ63ZW7 1834 aa24.03■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 Arrdc4A0A0B4J1F4 415 aa24.02■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 Arhgap4B1AUY3 965 aa24.02■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 SlkO54988 1233 aa24.02■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 Nr5a1P33242 462 aa24.02■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 Kifap3P70188 793 aa24.02■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 Fbln1Q08879 705 aa24.02■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 Usp49Q6P9L4 685 aa24.02■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 Clec16aQ80U30 1036 aa24.02■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 Zhx2Q8C0C0 836 aaKnown RBP24.02■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 Morc2bQ8C5W4 1022 aa24.02■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 Ttc27Q8CD92 847 aa24.02■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 LpxnQ99N69 386 aa24.02■■□□□ 1.44
Ccdc88a-202ENSMUST00000109477 Madcam1Q61826 405 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Ctdspl2Q8BG15 465 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Cog5Q8C0L8 829 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Il31raQ8K5B1 716 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Tdrd3Q91W18 743 aaKnown RBP24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Polr2dQ9D7M8 142 aaKnown RBP24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Serpinb2P12388 415 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 SsbP32067 415 aaKnown RBP24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 GabpaQ00422 454 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Pex1Q5BL07 1284 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Jakmip3Q5DTN8 844 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Cep120Q7TSG1 988 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Slc4a7Q8BTY2 1034 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Fez1Q8K0X8 392 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 BaatQ91X34 420 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Chd1lQ9CXF7 900 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Scrn1Q9CZC8 414 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Tjp3Q9QXY1 905 aa24.01■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Nme9A0A1L1SUL6 329 aa24■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Gm10134F6ZQC6 126 aa24■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Slc39a2G3X943 309 aa24■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Meis2P97367 477 aa24■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Pls1Q3V0K9 630 aa24■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Sh2d1b2Q45HK4 132 aa24■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Krt87Q6IMF0 495 aa24■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Slc4a8Q8JZR6 1089 aa24■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Ero1bQ8R2E9 467 aa24■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Havcr2Q8VIM0 281 aa24■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Pdcd6ipQ9WU78 869 aaKnown RBP24■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Stxbp4Q9WV89 557 aa24■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Col11a1Q61245 1804 aa24■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Gm44503E9PYU5 387 aa23.99■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Oog1E9Q5G7 496 aa23.99■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 HunkO88866 714 aa23.99■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Cbx2P30658 519 aa23.99■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Otud5Q3U2S4 566 aa23.99■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Psg29Q3URN6 468 aa23.99■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Brd2Q7JJ13 798 aaKnown RBP23.99■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 GlyctkQ8QZY2 523 aa23.99■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Dnaaf4Q8R368 420 aa23.99■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Nr3c2Q8VII8 978 aa23.99■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Atp5c1Q91VR2 298 aaKnown RBP23.99■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Gm5134E9QAB5 671 aa23.98■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Stx1aO35526 288 aa23.98■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Ccdc189Q6NZQ0 333 aa23.98■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Pxylp1Q8BHA9 480 aa23.98■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Anapc4Q91W96 807 aa23.98■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Mmtag2Q99LX5 260 aaKnown RBP23.98■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Utp3Q9JI13 469 aaKnown RBP23.98■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Brca1P48754 1812 aa23.98■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 C87977A2A958 498 aa23.98■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Acad12D3Z7X0 555 aa23.98■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Arl14Q3SXC5 192 aa23.98■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Dusp9Q7TNL7 452 aa23.98■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Cdca7Q9D0M2 382 aa23.98■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Map7d1A2AJI0 846 aa23.97■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Tpm3-rs7D3Z2H9 248 aa23.97■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Parp1P11103 1013 aaKnown RBP23.97■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 OsbpQ3B7Z2 805 aa23.97■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Nap1l4Q78ZA7 375 aaKnown RBP23.97■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Bhmt2Q91WS4 363 aa23.97■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Rfc4Q99J62 364 aa23.97■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Krt34Q9D646 392 aa23.97■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Cd274Q9EP73 290 aa23.97■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Dicer1Q8R418 1916 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Klhl34A2AI76 644 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Atp8b5A3FIN4 1183 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Mms22lB1AUR6 1238 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Rsbn1lD3Z0K6 821 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 FosP01101 380 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Ccdc162pQ0VG85 912 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Trnp1Q80ZI1 223 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Vmn1r199Q8R280 367 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 AdnpQ9Z103 1108 aaKnown RBP23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Skint3A7TZF0 458 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Ankrd35E9Q9D8 996 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Gm15448F6PZL4 682 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Flot1O08917 428 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Rasa2P58069 847 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Siah1bQ06985 282 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Kcnj11Q61743 390 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Bri3bpQ8BXV2 253 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Ces1Q8VCC2 565 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Arl6ip4Q9JM93 229 aa23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Ccnt1Q9QWV9 724 aaKnown RBP23.96■■□□□ 1.43
Ccdc88a-202ENSMUST00000109477 Lrrc32G3XA59 663 aa23.95■■□□□ 1.42
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms