RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 Cbx8Q9QXV1 362 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Pdcd6ipQ9WU78 869 aaKnown RBP13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Homer1Q9Z2Y3 366 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Gm5114W4VSN8 858 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Psme4Q5SSW2 1843 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Gm30191A0A0U1RNT7 187 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Znhit6Q3UFB2 460 aaKnown RBP13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Erich4Q3UNU4 136 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Znf697Q569E7 569 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Brd2Q7JJ13 798 aaKnown RBP13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Fut8Q9WTS2 575 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Ccdc191J3QQ27 883 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Mcm5P49718 733 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 AaasP58742 546 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Gcnt1Q09324 428 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Skap2Q3UND0 358 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Glra4Q61603 456 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Gpt2Q8BGT5 522 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Cd209bQ8CJ91 325 aa13.72□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Pitpnm2Q6ZPQ6 1335 aa13.71□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Slc39a2G3X943 309 aa13.71□□□□□ -0.21
Vamp1-203ENSMUST00000100942 MthfslL7N466 203 aa13.71□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Eif6O55135 245 aa13.71□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Adssl1P28650 457 aa13.71□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Map3k12Q60700 888 aa13.71□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Scnn1aQ61180 699 aa13.71□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Adck2Q6NSR3 617 aa13.71□□□□□ -0.21
Vamp1-203ENSMUST00000100942 SpidrQ8BGX7 933 aa13.71□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Zdhhc14Q8BQQ1 489 aa13.71□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Anapc4Q91W96 807 aa13.71□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Mis12Q9CY25 206 aa13.71□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Mtmr9Q9Z2D0 545 aa13.71□□□□□ -0.21
Vamp1-203ENSMUST00000100942 Cyp2j7A0A140T8U1 504 aa13.71□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Rsph10bE9PYQ0 876 aa13.71□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ifi207E9Q3L4 978 aa13.71□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Rnaseh1O70338 285 aa13.71□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Tubb4bP68372 445 aaKnown RBP13.71□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Jakmip3Q5DTN8 844 aa13.71□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ppp1r1bQ60829 194 aa13.71□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Pde1cQ64338 706 aa13.71□□□□□ -0.22
Vamp1-203ENSMUST00000100942 GypcQ78HU7 95 aa13.71□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Q8C1R3 189 aa13.71□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Fam193aQ8CGI1 1231 aaKnown RBP13.71□□□□□ -0.22
Vamp1-203ENSMUST00000100942 CrkQ64010 304 aa13.7□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ppp1r11Q8K1L5 131 aa13.7□□□□□ -0.22
Vamp1-203ENSMUST00000100942 TbcbQ9D1E6 244 aa13.7□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Sept14Q9DA97 430 aa13.7□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Sel1lQ9Z2G6 790 aa13.7□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Palm3A2TJV2 734 aa13.7□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Zmym1Q3TJB1 983 aa13.7□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Clca4aQ6Q473 924 aa13.7□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Galnt17Q7TT15 598 aa13.7□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Cfap100Q80VN0 613 aa13.7□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Taf6lQ8R2K4 616 aa13.7□□□□□ -0.22
Vamp1-203ENSMUST00000100942 GzmnQ920S1 248 aa13.7□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Trim30cD3YVI9 513 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Emc10Q3TAS6 258 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Tbx2Q60707 711 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Sval3Q76I99 144 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Onecut3Q8K557 490 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ppp2r5dQ91V89 594 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Arpp21Q9DCB4 807 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Dnai2A2AC93 623 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 MycnP03966 462 aaKnown RBP13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Mmp14P53690 582 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Rasa2P58069 847 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Tnni3kQ5GIG6 834 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Plekhg6Q8R0J1 787 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Hs2st1Q8R3H7 356 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ttll1Q91V51 423 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Yipf1Q91VU1 306 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ribc1Q9D0B8 379 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Krtap5-3Q9D226 196 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Inpp4aQ9EPW0 939 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 NagaQ9QWR8 415 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Mkrn1Q9QXP6 481 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ppfia4B8QI36 1187 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ankrd35E9Q9D8 996 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Sema3fO88632 785 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Gna11P21278 359 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Gdf10P97737 476 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Psg29Q3URN6 468 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Madcam1Q61826 405 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Exoc8Q6PGF7 716 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Rasgrp4Q8BTM9 673 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Q91WD4 421 aa13.69□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Csf1rP09581 977 aa13.68□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Cdan1Q8CC12 1239 aa13.68□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Usp27Q8CEG8 438 aa13.68□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Fermt2Q8CIB5 680 aa13.68□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Kank3Q9Z1P7 791 aa13.68□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Cacnb3P54285 484 aa13.68□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Map3k11Q80XI6 850 aa13.68□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ildr1Q8CBR1 537 aa13.68□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Krt78E9Q0F0 1068 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Nr1i2O54915 431 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Kctd19Q562E2 927 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Gja3Q64448 417 aa13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Rbm12b2Q66JV4 834 aaKnown RBP13.67□□□□□ -0.22
Vamp1-203ENSMUST00000100942 Ccdc73Q8CDM4 1066 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms