RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Stard7Q8R1R3 373 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Snap47Q8R570 413 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Bhmt2Q91WS4 363 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Sbf1Q6ZPE2 1867 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Ktn1Q61595 1327 aaKnown RBP10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Cyp26c1B2RXA7 518 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Celf5D3Z4T1 395 aaKnown RBP10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Api5O35841 504 aaKnown RBP10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 GclcP97494 637 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Trappc10Q3TLI0 1259 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Esyt1Q3U7R1 1092 aaKnown RBP10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Mrgprb1Q3UG61 350 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Brd9Q3UQU0 596 aaKnown RBP10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Rgl1Q60695 768 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Ccdc172Q810N9 267 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Ttc8Q8VD72 515 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Kdm4bQ91VY5 1086 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Antxr1Q9CZ52 562 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Nudt12Q9DCN1 462 aa10.12□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Nme9A0A1L1SUL6 329 aa10.11□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Gjd2O54851 321 aa10.11□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 FosP01101 380 aa10.11□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Mtmr3Q8K296 1196 aa10.11□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Gprc5cQ8K3J9 440 aa10.11□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Krt85Q9Z2T6 507 aa10.11□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Smchd1Q6P5D8 2007 aaKnown RBP10.11□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Gm7356A0A087WSA6 508 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 A0A0U1RNP2 1173 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Prpmp5E9PXN1 296 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Phldb3E9QAF4 648 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Lig1P37913 916 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Xxylt1Q3U4G3 392 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Adam39Q7M762 756 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Usp17leQ7M764 540 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Rtp1Q8C8C1 263 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Hs2st1Q8R3H7 356 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Apobec3Q99J72 440 aaKnown RBP10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Elp3Q9CZX0 547 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Q9DAQ4 598 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Map3k20Q9ESL4 802 aaKnown RBP10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Clic4Q9QYB1 253 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Parp2O88554 559 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Wnt7aP24383 349 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Morf4l1P60762 362 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Rps6P62754 249 aaKnown RBP10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Stim2P83093 746 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Nbr1P97432 988 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Lrrcc1Q69ZB0 1026 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Znf618Q80YY7 953 aaKnown RBP10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Adgra1Q8C4G9 578 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 AdpgkQ8VDL4 496 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Katnbl1Q9CWJ3 299 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Arpp21Q9DCB4 807 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Igbp1bQ9QZ29 343 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 GdaQ9R111 454 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 JcadQ5DTX6 1320 aa10.1□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Fyb2A2A995 729 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Zc3h7bF8VPP8 982 aaKnown RBP10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Nlrx1Q3TL44 975 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Btg1-ps1Q3V0S2 161 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Btg1-ps2Q3V0X0 161 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Igf2bp2Q5SF07 592 aaKnown RBP10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Cyp7b1Q60991 507 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 E4f1Q8CCE9 783 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Smc2Q8CG48 1191 aaKnown RBP10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Acat1Q8QZT1 424 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Ces1Q8VCC2 565 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Slc12a8Q8VI23 705 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Usp26Q99MX1 835 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Ccer1Q9CQL2 403 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Yeats4Q9CR11 227 aaKnown RBP10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 PfasQ5SUR0 1337 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Skint7A7XV04 395 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Lnx1O70263 728 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Cyp2b10P12791 500 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Cd22P35329 862 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Nt5c2Q3V1L4 560 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Usp28Q5I043 1051 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Yars2Q8BYL4 472 aaKnown RBP10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Kbtbd4Q8R179 534 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Trim29Q8R2Q0 587 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Stk38Q91VJ4 465 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 F11Q91Y47 624 aa10.09□□□□□ -0.79
Ccdc28a-201ENSMUST00000052648 Gm43738A0A0G2JEA5 862 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Tbc1d2B1AVH7 922 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Neurl1bQ0MW30 546 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Larp6Q8BN59 492 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Nod2Q8K3Z0 1020 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Trim11Q99PQ2 467 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Col4a3bpQ9EQG9 624 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Mtmr9Q9Z2D0 545 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Ccdc112A0AUP1 442 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Rabgap1A2AWA9 1064 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Plcb2A3KGF7 1181 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 MyocO70624 490 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Sptlc2P97363 560 aaKnown RBP10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Il6stQ00560 917 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Plekha7Q3UIL6 1118 aaKnown RBP10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Cyp4f37Q3V1F1 546 aa10.08□□□□□ -0.8
Ccdc28a-201ENSMUST00000052648 Madcam1Q61826 405 aa10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms