RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Nr2f2P43135 414 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Atp8a1P70704 1164 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Nom1Q3UFM5 854 aaKnown RBP10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gucy2fQ5SDA5 1108 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Hps3Q91VB4 1002 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Creb3l3Q91XE9 479 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Dhx58Q99J87 678 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gpaa1Q9WTK3 621 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Trim60Q8VI40 466 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Tpcn1Q9EQJ0 817 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 MefvQ9JJ26 767 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Rasgrf1P27671 1262 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 YwhaeP62259 255 aaKnown RBP10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Cdc37Q61081 379 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Kcna6Q61923 529 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Krt74Q6IFZ9 495 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Tmem132dQ76HP3 1097 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Morc4Q8BMD7 928 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Rasgrp4Q8BTM9 673 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Rint1Q8BZ36 792 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Znf467Q8JZL0 594 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Mrpl50Q8VDT9 159 aaKnown RBP10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Spdl1Q923A2 608 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Efcc1Q9JJF6 558 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Col17a1Q07563 1470 aa10.74□□□□□ -0.69
Syne1-201ENSMUST00000041639 Kmt5aQ2YDW7 349 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Cacnb1Q8R3Z5 597 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 NkapQ9D0F4 415 aaKnown RBP10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Rwdd2aQ9D9S3 292 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gm11985A0A1B0GS61 206 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Stat5bP42232 786 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ptpn14Q62130 1189 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Prr18Q6PAN7 307 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Vmn1r199Q8R280 367 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Arl8aQ8VEH3 186 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ppil4Q9CXG3 492 aaKnown RBP10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Cyth1Q9QX11 398 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gm28042B7ZCM9 1014 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Fam83bQ0VBM2 1012 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Clec16aQ80U30 1036 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Rcor2Q8C796 523 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Dach1Q9QYB2 751 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Lrrc32G3XA59 663 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Surf1P09925 306 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Kif11Q6P9P6 1052 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ophn1Q99J31 802 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Rrbp1Q99PL5 1605 aaKnown RBP10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Krt90E9Q1Z0 538 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Elmsan1E9Q2I4 1089 aaKnown RBP10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 1700122O11RikJ3QPW6 241 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Serpini1O35684 410 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 XlrP05531 208 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Tsr1Q5SWD9 803 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Elf1Q60775 612 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Fxr1Q61584 677 aaKnown RBP10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Slc44a1Q6X893 653 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ankfy1Q810B6 1169 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Cabs1Q8C633 391 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Stk39Q9Z1W9 556 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Hfm1D3Z4R1 1434 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ptch1Q61115 1434 aa10.73□□□□□ -0.69
Syne1-201ENSMUST00000041639 LdhbP16125 334 aaKnown RBP10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Spata4Q8K3V1 295 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Rad51bO35719 350 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Il7P10168 154 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gucy2eP52785 1108 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Dynll1P63168 89 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Mum1l1Q4VA55 681 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Nlrp14Q6B966 993 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 B4galnt4Q766D5 1034 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ccdc87Q8CDL9 855 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Wbp11Q923D5 641 aaKnown RBP10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Psip1Q99JF8 528 aaKnown RBP10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 CactinQ9CS00 772 aaKnown RBP10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Trmt112Q9DCG9 125 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ror2Q9Z138 944 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Olfr247E9PVJ7 320 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Olfr819K7N727 320 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 NsfP46460 744 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Cracr2aQ3UP38 310 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Znf532Q6NXK2 1036 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Jade1Q6ZPI0 834 aaKnown RBP10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Arid5bQ8BM75 1188 aaKnown RBP10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Erp44Q9D1Q6 406 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Dctpp1Q9QY93 170 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Snx1Q9WV80 522 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Gna14P30677 355 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Tcp11Q01755 566 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Nr1d1Q3UV55 615 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Aggf1Q7TN31 711 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Mms19Q9D071 1031 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Zfyve19Q9DAZ9 389 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Rilpl1Q9JJC6 406 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 GdaQ9R111 454 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Zfp408H7BX78 710 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Lnx1O70263 728 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Cd3dP04235 173 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 SrlQ7TQ48 910 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ankrd45Q810N6 248 aa10.72□□□□□ -0.69
Syne1-201ENSMUST00000041639 Ppp4r4Q8C0Y0 875 aa10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms