RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Coro7Q9D2V7 922 aa21.23■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Eef1gQ9D8N0 437 aaKnown RBP21.23■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Ppp2r3dQ9Z176 491 aa21.23■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Hnrnph3D3Z3N4 346 aaKnown RBP21.22■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Krt18P05784 423 aa21.22■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Cmtr1Q9DBC3 837 aa21.22■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Ddx23D3Z0M9 819 aaKnown RBP21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Cct5P80316 541 aaKnown RBP21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Ssrp1Q08943 708 aaKnown RBP21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Cep95Q8BVV7 827 aa21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Pex3Q9QXY9 372 aa21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Arfgef1G3X9K3 1846 aaKnown RBP21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Gm1993A6X8I0 212 aa21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Etnk2A7MCT6 385 aa21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 SlxD3Z347 212 aa21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Surf6P70279 355 aaKnown RBP21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Zc3h6Q8BYK8 1177 aa21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Prl7b1Q8CGZ9 251 aa21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Znf131Q8K3J5 619 aa21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Nup133Q8R0G9 1155 aa21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Rhobtb3Q9CTN4 611 aa21.21■□□□□ 0.99
Ccdc50-201ENSMUST00000039443 Pet2A2AHY8 747 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Meis3P97368 378 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Ppp1r7Q3UM45 361 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Cabp7Q91ZM8 215 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Sh3bp5lQ99LH9 392 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Krt82Q99M74 516 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Duox1A2AQ92 1551 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Gm1758F6VZZ1 202 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Mapkapk5O54992 473 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 IntuQ059U7 942 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Esyt2Q3TZZ7 845 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Tekt3Q6X6Z7 490 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Def6Q8C2K1 630 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Ppp2r5dQ91V89 594 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Sf3b3Q921M3 1217 aaKnown RBP21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Plagl2Q925T4 496 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Smtnl1Q99LM3 459 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Ppp1r3gQ9CW07 347 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Clstn1Q9EPL2 979 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Cd2apQ9JLQ0 637 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 GsdmeQ9Z2D3 512 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Plch1Q4KWH5 1682 aa21.2■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 VirmaA2AIV2 1811 aaKnown RBP21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Gm28919A0A087WP35 240 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Cyp2c23E9Q5K4 494 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 RaraP11416 462 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Tcp1P11983 556 aaKnown RBP21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 NntQ61941 1086 aaKnown RBP21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Trim9Q8C7M3 817 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 LgsnQ8CIX8 563 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Osbpl1aQ91XL9 950 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 ThegQ9JMB1 375 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Nr2e3Q9QXZ7 395 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Peg12Q9WVA7 283 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Zfyve9A2A8R0 1397 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Prss40A6H6T1 365 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Ftl1P29391 183 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Pla2g4aP47713 748 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Fam198bQ3UPI1 517 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 SfswapQ3USH5 945 aaKnown RBP21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Sdccag8Q80UF4 717 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Lzts2Q91YU6 671 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Six6os1Q9CTN5 574 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Klra17Q9JMA4 273 aa21.19■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Apol7aB2RT54 418 aa21.18■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Msh3P13705 1091 aa21.18■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Bbof1Q3V079 533 aa21.18■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Cd37Q61470 281 aa21.18■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Asic1Q6NXK8 526 aa21.18■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Mtss1lQ6P9S0 715 aa21.18■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Krit1Q6S5J6 736 aa21.18■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Gimap8Q75N62 688 aa21.18■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Snip1Q8BIZ6 383 aaKnown RBP21.18■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Tacc2Q9JJG0 1149 aa21.18■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Peak1Q69Z38 1735 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Akap2O54931 893 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Npy5rO70342 466 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Acot10Q32MW3 439 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Myo19Q5SV80 963 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Mettl25Q6NXH8 597 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Asic3Q6X1Y6 530 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Slfnl1Q8BHW9 410 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Drd5Q8BLD9 478 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 TxlnbQ8VBT1 685 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 OscarQ8VBT3 265 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 RtcbQ99LF4 505 aaKnown RBP21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Sept3Q9Z1S5 350 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Foxn3Q499D0 457 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Camsap3Q80VC9 1252 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Tmx4Q8C0L0 335 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Snrnp35Q9D384 244 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Trp53inp1Q9QXE4 239 aa21.17■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Chrna9G3X8Z7 479 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Eif3j1Q3UGC7 261 aaKnown RBP21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Lrrc55Q3UY51 311 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Sco1Q5SUC9 284 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Ccna1Q61456 421 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Eif3j2Q66JS6 263 aa21.16■□□□□ 0.98
Ccdc50-201ENSMUST00000039443 Ifih1Q8R5F7 1025 aa21.16■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms