RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Pgrmc1O55022 195 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Art2aP17981 287 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Serpina1bP22599 413 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Myo1fP70248 1099 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Trim43aQ3TL54 445 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Rnf207Q3V3A7 635 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Mrpl50Q8VDT9 159 aaKnown RBP11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Utp11Q9CZJ1 253 aaKnown RBP11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Rcan1Q9JHG6 198 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 LtkP08923 888 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ftl2P49945 183 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Tcp11l2Q8K1H7 517 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Col20a1Q923P0 1320 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Npdc1Q64322 332 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Q66JV7 365 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 IarsQ8BU30 1262 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Homer2Q9QWW1 354 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Slc12a7Q9WVL3 1083 aa11.07□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Trim80Q3V061 624 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Eif4a3Q91VC3 411 aaKnown RBP11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Psmd6Q99JI4 389 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Adgrl3Q80TS3 1537 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 OtulinQ3UCV8 352 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Atp1a1Q8VDN2 1023 aaKnown RBP11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Phkg2Q9DB30 406 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 SufuQ9Z0P7 484 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Svs3aF2Z472 265 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Irx2P81066 474 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Hdac4Q6NZM9 1076 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ppp2r2aQ6P1F6 447 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Dhx40Q6PE54 779 aaKnown RBP11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Cog5Q8C0L8 829 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Fermt3Q8K1B8 665 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ssx2ipQ8VC66 615 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 EpgnQ924X1 152 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ciao1Q99KN2 339 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Lrch1P62046 709 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 AmphQ7TQF7 686 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 RbsnQ80Y56 783 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Pex19Q8VCI5 299 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Dnajc17Q91WT4 303 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Fkbp6Q91XW8 327 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Mrpl40Q9Z2Q5 206 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Gm28360A0A087WR25 190 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Gm28042B7ZCM9 1014 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 LbrQ3U9G9 626 aaKnown RBP11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 DbnlQ62418 436 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Dhx38Q80X98 1228 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Pih1h3bQ8C6P5 218 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Psmd2Q8VDM4 908 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Nde1Q9CZA6 344 aa11.06□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Klhl14Q69ZK5 630 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Dis3l2Q8CI75 870 aaKnown RBP11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Foxp3Q99JB6 429 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Tsc1Q9EP53 1161 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Dusp10Q9ESS0 483 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Acad12D3Z7X0 555 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Gm7995L7N2E4 160 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Il7P10168 154 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Rasgrf2P70392 1189 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Trim71Q1PSW8 855 aaKnown RBP11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Lrrc36Q3V0M2 755 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Acad11Q80XL6 779 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Nlrp5Q9R1M5 1163 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ccdc24E9PUW8 296 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Mdh1bQ5F204 500 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Nuak1Q641K5 658 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Epc1Q8C9X6 813 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Lrp2bpQ9D4C6 346 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Pex3Q9QXY9 372 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Apol11aE9PZG0 334 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Card10P58660 1021 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Snx25Q3ZT31 840 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Usp8Q80U87 1080 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Slc39a6Q8C145 765 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Lsm14bQ8CGC4 385 aaKnown RBP11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Xrcc5P27641 732 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Pik3caP42337 1068 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Tlr7P58681 1050 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Asap2Q7SIG6 958 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Kctd6Q8BNL5 237 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Gpcpd1Q8C0L9 675 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Apol7bB1AQP7 369 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Lnx1O70263 728 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Slc7a1Q09143 622 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Cep126Q0VBV7 1103 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Morc4Q8BMD7 928 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Tom1l1Q923U0 474 aa11.05□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Olfm3P63056 478 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Serpinb6Q60854 378 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Tgfb1i1Q62219 461 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Myo1eE9Q634 1107 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Casp1P29452 402 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Arpp21Q9DCB4 807 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Traf1P39428 409 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ect2Q07139 913 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Znf667Q2TL60 609 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Acot11Q8VHQ9 594 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ccdc70Q9D9B0 223 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Cfap221A9Q751 836 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms