RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Eif6O55135 245 aa18.25■□□□□ 0.51
Trim8-201ENSMUST00000026008 Kcnb1Q03717 857 aa18.25■□□□□ 0.51
Trim8-201ENSMUST00000026008 Slc9a2Q3ZAS0 814 aa18.25■□□□□ 0.51
Trim8-201ENSMUST00000026008 Ppp2r5dQ91V89 594 aa18.25■□□□□ 0.51
Trim8-201ENSMUST00000026008 Psmd10Q9Z2X2 231 aa18.25■□□□□ 0.51
Trim8-201ENSMUST00000026008 Man1a2P39098 641 aa18.24■□□□□ 0.51
Trim8-201ENSMUST00000026008 Tlr8P58682 1032 aa18.24■□□□□ 0.51
Trim8-201ENSMUST00000026008 VrtnQ3SYK4 740 aa18.24■□□□□ 0.51
Trim8-201ENSMUST00000026008 Krit1Q6S5J6 736 aa18.24■□□□□ 0.51
Trim8-201ENSMUST00000026008 Rab11fip4Q8BQP8 635 aa18.24■□□□□ 0.51
Trim8-201ENSMUST00000026008 Galntl5Q9D4M9 431 aa18.24■□□□□ 0.51
Trim8-201ENSMUST00000026008 Pabpc1lA2A5N3 607 aaKnown RBP18.24■□□□□ 0.51
Trim8-201ENSMUST00000026008 GnaqP21279 359 aa18.24■□□□□ 0.51
Trim8-201ENSMUST00000026008 Prpf38aQ4FK66 312 aaKnown RBP18.24■□□□□ 0.51
Trim8-201ENSMUST00000026008 Fhod1Q6P9Q4 1197 aa18.24■□□□□ 0.51
Trim8-201ENSMUST00000026008 AllcQ9JHX6 414 aa18.24■□□□□ 0.51
Trim8-201ENSMUST00000026008 Nhsl1Q8CAF4 1587 aa18.24■□□□□ 0.51
Trim8-201ENSMUST00000026008 Gm3893E9Q1I1 302 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Ifnar1P33896 590 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Pla2g4aP47713 748 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Sema4bQ62179 823 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Fkbp3Q62446 224 aaKnown RBP18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Lrrc41Q8K1C9 807 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 HibadhQ99L13 335 aaKnown RBP18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Plcb1Q9Z1B3 1216 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Nme9A0A1L1SUL6 329 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Prl2c2P04095 224 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Trap1aP19473 224 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 NfixP70257 488 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Tmem35bQ3U0Y2 150 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Rnf40Q3U319 1001 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Gja3Q64448 417 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Znf280dQ68FE8 974 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Bbs9Q811G0 885 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 GlyctkQ8QZY2 523 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 RabggtaQ9JHK4 567 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Knop1Q9Z2Q2 478 aaKnown RBP18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Ecm29Q6PDI5 1840 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Ccdc42Q5SV66 316 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 HrQ61645 1182 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Hs2st1Q8R3H7 356 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 ToporslQ9D2F8 683 aa18.23■□□□□ 0.51
Trim8-201ENSMUST00000026008 Pcdh11xF6ZNL5 1338 aa18.22■□□□□ 0.51
Trim8-201ENSMUST00000026008 Gm1993A6X8I0 212 aa18.22■□□□□ 0.51
Trim8-201ENSMUST00000026008 SlxD3Z347 212 aa18.22■□□□□ 0.51
Trim8-201ENSMUST00000026008 Eya3P97480 510 aa18.22■□□□□ 0.51
Trim8-201ENSMUST00000026008 Nsrp1Q5NCR9 542 aa18.22■□□□□ 0.51
Trim8-201ENSMUST00000026008 Ezh2Q61188 746 aaKnown RBP18.22■□□□□ 0.51
Trim8-201ENSMUST00000026008 EpgnQ924X1 152 aa18.22■□□□□ 0.51
Trim8-201ENSMUST00000026008 Trim30cD3YVI9 513 aa18.22■□□□□ 0.51
Trim8-201ENSMUST00000026008 A430078G23RikE9Q7Y4 484 aa18.22■□□□□ 0.51
Trim8-201ENSMUST00000026008 Spg7Q3ULF4 781 aa18.22■□□□□ 0.51
Trim8-201ENSMUST00000026008 Cnnm4Q69ZF7 771 aa18.22■□□□□ 0.51
Trim8-201ENSMUST00000026008 Cwc15Q9JHS9 229 aaKnown RBP18.22■□□□□ 0.51
Trim8-201ENSMUST00000026008 Snx12O70493 165 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 Nf2P46662 596 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 NeblQ0II04 452 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 Slc9b1Q8C0X2 565 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 Plekhg2Q6KAU7 1340 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 Gm42641I6L9G2 585 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 Pip4k2aO70172 405 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 Lrrc43Q3V0L5 667 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 AtripQ8BMG1 785 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 Usp27Q8CEG8 438 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 2310002L09RikQ9D7L5 217 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 CenphQ9QYM8 241 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 Nol4P60954 483 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 Tubb4bP68372 445 aaKnown RBP18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 RragaQ80X95 313 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 Tmem179Q8BHH9 233 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 HmcesQ8R1M0 353 aaKnown RBP18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 Arl6ip4Q9JM93 229 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 Mtmr9Q9Z2D0 545 aa18.21■□□□□ 0.51
Trim8-201ENSMUST00000026008 Arid4aF8VPQ2 1261 aaKnown RBP18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Vmn2r71L7N2D8 855 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Mboat4P0C7A3 435 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Cct5P80316 541 aaKnown RBP18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Esyt2Q3TZZ7 845 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Ccdc51Q3URS9 406 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Papd7Q6PB75 542 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Arhgef19Q8BWA8 802 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Mettl5Q8K1A0 209 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Slc44a4Q91VA1 707 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Efhd1Q9D4J1 240 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 ThegQ9JMB1 375 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Kndc1Q0KK55 1742 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Bpifb4A2BGH0 617 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Stap2Q8R0L1 411 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Adcy3Q8VHH7 1145 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Hps4Q99KG7 671 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Syce1Q9D495 329 aa18.2■□□□□ 0.5
Trim8-201ENSMUST00000026008 Ano9P86044 747 aa18.19■□□□□ 0.5
Trim8-201ENSMUST00000026008 Acot10Q32MW3 439 aa18.19■□□□□ 0.5
Trim8-201ENSMUST00000026008 Oxr1Q4KMM3 866 aa18.19■□□□□ 0.5
Trim8-201ENSMUST00000026008 Mxd3Q80US8 206 aa18.19■□□□□ 0.5
Trim8-201ENSMUST00000026008 Cracr2bQ80ZJ8 394 aa18.19■□□□□ 0.5
Trim8-201ENSMUST00000026008 Nop9Q8BMC4 636 aaKnown RBP18.19■□□□□ 0.5
Trim8-201ENSMUST00000026008 Eif4a3Q91VC3 411 aaKnown RBP18.19■□□□□ 0.5
Trim8-201ENSMUST00000026008 Ccdc105Q9D4K7 499 aa18.19■□□□□ 0.5
Trim8-201ENSMUST00000026008 March8Q9DBD2 286 aa18.19■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms