RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Znf326O88291 580 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 GmnnO88513 206 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Tpp1O89023 562 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 GpiP06745 558 aaKnown RBP11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Hoxa13Q62424 386 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Mtss1lQ6P9S0 715 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 AdpgkQ8VDL4 496 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Snrnp35Q9D384 244 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Heg1E9Q7X6 1337 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Ankrd35E9Q9D8 996 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Enc1O35709 589 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Prl7d1P04769 244 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 RdxP26043 583 aaKnown RBP11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Fbxo2Q80UW2 297 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Anks1bQ8BIZ1 1259 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Parp10Q8CIE4 960 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Tada3Q8R0L9 432 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Cdca7Q9D0M2 382 aa11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Akap8Q9DBR0 687 aaKnown RBP11.22□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Phrf1A6H619 1682 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Tnfrsf11aO35305 625 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 H2afxP27661 143 aaKnown RBP11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Ric8aQ3TIR3 530 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Ttll12Q3UDE2 639 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Brip1Q5SXJ3 1174 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Thap3Q8BJ25 218 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Plcb1Q9Z1B3 1216 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Orc1Q9Z1N2 840 aaKnown RBP11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Ttc6G3UYY4 1857 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Klhdc7aA2APT9 773 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Chrna9G3X8Z7 479 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 SpidrQ8BGX7 933 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Tmem63cQ8CBX0 802 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Znf131Q8K3J5 619 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Asic2Q925H0 512 aa11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 Zcrb1Q9CZ96 217 aaKnown RBP11.21□□□□□ -0.61
Rnft1-201ENSMUST00000020827 4932429P05RikA2ADI4 785 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Etnk2A7MCT6 385 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Kif3aP28741 701 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Pola2P33611 600 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Glg1Q61543 1175 aaKnown RBP11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 GlyctkQ8QZY2 523 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Sept14Q9DA97 430 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Acot3Q9QYR7 432 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Kank3Q9Z1P7 791 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Mtmr2Q9Z2D1 643 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 StrcQ8VIM6 1809 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Scgb2b19J3QM75 112 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Cd44P15379 778 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Atp6v0a2P15920 856 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Pls1Q3V0K9 630 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Kif1bpQ6ZPU9 617 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Mtmr4Q91XS1 1190 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Mfap3lQ9D3X9 409 aa11.21□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Gabpb2P81069 414 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Grm4Q68EF4 912 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Cd209bQ8CJ91 325 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Hexim1Q8R409 356 aaKnown RBP11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 AmfrQ9R049 643 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Gm7168A0AUV4 508 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Parp1P11103 1013 aaKnown RBP11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Fam178bQ24JP3 464 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Akap4Q60662 849 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Hdac4Q6NZM9 1076 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Fnbp4Q6ZQ03 1031 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Trim9Q8C7M3 817 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Ccdc47Q9D024 483 aaKnown RBP11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Serpina16D3Z660 418 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Uri1Q3TLD5 531 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Olfr832Q7TRG9 312 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Strip1Q8C079 837 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 IntS13Q8QZV7 732 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Rfc4Q99J62 364 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 ChmQ9QXG2 665 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Sel1lQ9Z2G6 790 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Sh3tc1G3X9F6 1346 aa11.2□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Lrrc55Q3UY51 311 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Ttc26Q8BS45 554 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Fam53cQ8BXQ8 393 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Csgalnact2Q8C1F4 542 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 InhbeO08717 350 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Sept2P42208 361 aaKnown RBP11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Elmo3Q8BYZ7 720 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Copb1Q9JIF7 953 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Rexo5D3YW29 759 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Vps33bP59016 617 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Q8C5C9 218 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Cyp2d26Q8CIM7 500 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Tdrd3Q91W18 743 aaKnown RBP11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Prkab1Q9R078 270 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Foxn2E9Q7L6 429 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Usp17lbE9Q9U0 468 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Fam183bQ5NC57 135 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Ift88Q61371 824 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Cnga2Q62398 664 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Yipf1Q91VU1 306 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Myoz2Q9JJW5 264 aa11.19□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Jade2Q6ZQF7 829 aa11.18□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Ankrd24Q80VM7 985 aa11.18□□□□□ -0.62
Rnft1-201ENSMUST00000020827 Ccdc12Q8R344 166 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms