RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 ToporslQ9D2F8 683 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 Jag1Q9QXX0 1218 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 GnaqP21279 359 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 Eya3P97480 510 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 Rnf40Q3U319 1001 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 Cdk8Q8R3L8 464 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 Krt82Q99M74 516 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 Apopt1Q9CQW7 192 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 Fut8Q9WTS2 575 aa18.35■□□□□ 0.53
Shh-201ENSMUST00000002708 Atp1a1Q8VDN2 1023 aaKnown RBP18.34■□□□□ 0.53
Shh-201ENSMUST00000002708 Scgb2b11A0A087WR49 112 aa18.34■□□□□ 0.53
Shh-201ENSMUST00000002708 Cnnm4Q69ZF7 771 aa18.34■□□□□ 0.53
Shh-201ENSMUST00000002708 Dlg1Q811D0 905 aaKnown RBP18.34■□□□□ 0.53
Shh-201ENSMUST00000002708 Sar1bQ9CQC9 198 aa18.34■□□□□ 0.53
Shh-201ENSMUST00000002708 EhhadhQ9DBM2 718 aa18.34■□□□□ 0.53
Shh-201ENSMUST00000002708 RaraP11416 462 aa18.33■□□□□ 0.53
Shh-201ENSMUST00000002708 Ppp4cP97470 307 aa18.33■□□□□ 0.53
Shh-201ENSMUST00000002708 Nsrp1Q5NCR9 542 aa18.33■□□□□ 0.53
Shh-201ENSMUST00000002708 Arhgef2Q60875 985 aa18.33■□□□□ 0.53
Shh-201ENSMUST00000002708 Zcrb1Q9CZ96 217 aaKnown RBP18.33■□□□□ 0.53
Shh-201ENSMUST00000002708 Hsd3b7Q9EQC1 369 aa18.33■□□□□ 0.53
Shh-201ENSMUST00000002708 Kank3Q9Z1P7 791 aa18.33■□□□□ 0.53
Shh-201ENSMUST00000002708 Lamb1P02469 1786 aa18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 Gm30191A0A0U1RNT7 187 aa18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 Gm42641I6L9G2 585 aa18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 Kifc2O08672 792 aa18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 ByslO54825 436 aaKnown RBP18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 Cct5P80316 541 aaKnown RBP18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 Tsr1Q5SWD9 803 aa18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 Lrrn2Q6PHP6 730 aa18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 Ankrd13aQ80UP5 588 aa18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 Mxd3Q80US8 206 aa18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 AtripQ8BMG1 785 aa18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 Taok3Q8BYC6 898 aa18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 OplahQ8K010 1288 aa18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 Phrf1A6H619 1682 aa18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 TicrrQ8BQ33 1889 aa18.33■□□□□ 0.52
Shh-201ENSMUST00000002708 Pabpc1lA2A5N3 607 aaKnown RBP18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 A430078G23RikE9Q7Y4 484 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Dnajc21E9Q8D0 531 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 InhbeO08717 350 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Parp1P11103 1013 aaKnown RBP18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Hspa1lP16627 641 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Eps8l2Q99K30 729 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 MymkQ9D1N4 221 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Git2Q9JLQ2 708 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Nup188Q6ZQH8 1759 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Nr1i2O54915 431 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Mboat4P0C7A3 435 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Dnm2P39054 870 aaKnown RBP18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Sema4bQ62179 823 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Slc20a2Q80UP8 656 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Ccdc122Q8BVN0 290 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Trub2Q91WG3 331 aaKnown RBP18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Akt1s1Q9D1F4 257 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 UvssaQ9D479 717 aa18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Togaram1Q6A070 1776 aaKnown RBP18.32■□□□□ 0.52
Shh-201ENSMUST00000002708 Zfp853A0A1D5RM95 733 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Gm5934D3Z4U6 212 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Tmem134Q8R0J4 195 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Trmt44Q9D2Q2 713 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Dnajc7Q9QYI3 494 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Psmd14O35593 310 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Tbc1d2bQ3U0J8 965 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Islr2Q5RKR3 745 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Mtss1lQ6P9S0 715 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Strip1Q8C079 837 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Arhgef6Q8K4I3 771 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Gtf3c5Q8R2T8 520 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 PfasQ5SUR0 1337 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Herc3A6H6S0 1050 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 4930523C07RikE9Q2T4 99 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Kifap3P70188 793 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Pip5kl1Q6U7H8 395 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Slc9b1Q8C0X2 565 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Ccdc38Q8CDN8 563 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Emilin2Q8K482 1074 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Exoc1Q8R3S6 894 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Dnajc17Q91WT4 303 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 RabggtaQ9JHK4 567 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Ppp2r3dQ9Z176 491 aa18.31■□□□□ 0.52
Shh-201ENSMUST00000002708 Nap1l2P51860 460 aa18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 Ankrd13cQ3UX43 541 aa18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 Foxn3Q499D0 457 aa18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 PRAG1Q571I4 1179 aa18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 Vmn1r218Q8R261 298 aa18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 Ppp2r5dQ91V89 594 aa18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 ThegQ9JMB1 375 aa18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 Zscan18E9PUD6 809 aa18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 Arid4aF8VPQ2 1261 aaKnown RBP18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 Eif6O55135 245 aa18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 Grem2O88273 168 aa18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 Sec31aQ3UPL0 1230 aaKnown RBP18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 MypopQ8R4U1 393 aa18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 Snrnp35Q9D384 244 aa18.3■□□□□ 0.52
Shh-201ENSMUST00000002708 Frmpd4A2AFR3 1320 aa18.29■□□□□ 0.52
Shh-201ENSMUST00000002708 Psd3Q2PFD7 1037 aa18.29■□□□□ 0.52
Shh-201ENSMUST00000002708 Rbm26Q6NZN0 1012 aaKnown RBP18.29■□□□□ 0.52
Shh-201ENSMUST00000002708 Cabp7Q91ZM8 215 aa18.29■□□□□ 0.52
Shh-201ENSMUST00000002708 Trmt112Q9DCG9 125 aa18.29■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 80.6 ms