RNA–Protein interactions for RNA: YHL009W-A

YHL009W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YHL009W-A, Length 1,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YHL009W-AYHL009W-A SNF3P10870 884 aa2.45□□□□□ -2.02
YHL009W-AYHL009W-A DBF20P32328 564 aa2.45□□□□□ -2.02
YHL009W-AYHL009W-A SIP2P34164 415 aaKnown RBP2.45□□□□□ -2.02
YHL009W-AYHL009W-A SEC24P40482 926 aaKnown RBP2.45□□□□□ -2.02
YHL009W-AYHL009W-A BTN2P53286 410 aa2.45□□□□□ -2.02
YHL009W-AYHL009W-A YDL012CQ12489 107 aa2.45□□□□□ -2.02
YHL009W-AYHL009W-A VPS17P32913 551 aa2.44□□□□□ -2.02
YHL009W-AYHL009W-A IST3P40565 148 aaPredicted RBP2.44□□□□□ -2.02
YHL009W-AYHL009W-A IME4P41833 600 aa2.44□□□□□ -2.02
YHL009W-AYHL009W-A RPS10BP46784 105 aaKnown RBP2.44□□□□□ -2.02
YHL009W-AYHL009W-A SAM50P53969 484 aa2.44□□□□□ -2.02
YHL009W-AYHL009W-A RPS10AQ08745 105 aaPredicted RBP2.44□□□□□ -2.02
YHL009W-AYHL009W-A YOR387CQ08910 206 aa2.44□□□□□ -2.02
YHL009W-AYHL009W-A SGV1P23293 657 aaKnown RBP2.43□□□□□ -2.02
YHL009W-AYHL009W-A UBA4P38820 440 aa2.43□□□□□ -2.02
YHL009W-AYHL009W-A NPR2P39923 615 aa2.43□□□□□ -2.02
YHL009W-AYHL009W-A FMP10P40098 244 aa2.43□□□□□ -2.02
YHL009W-AYHL009W-A PKP1P40530 394 aa2.43□□□□□ -2.02
YHL009W-AYHL009W-A YLR152CP54072 576 aa2.43□□□□□ -2.02
YHL009W-AYHL009W-A YMR087WQ04299 284 aa2.43□□□□□ -2.02
YHL009W-AYHL009W-A BLS1Q06071 122 aa2.43□□□□□ -2.02
YHL009W-AYHL009W-A HNT3Q08702 217 aa2.43□□□□□ -2.02
YHL009W-AYHL009W-A ERG27Q12452 347 aaKnown RBP2.43□□□□□ -2.02
YHL009W-AYHL009W-A SNF1P06782 633 aaKnown RBP2.42□□□□□ -2.02
YHL009W-AYHL009W-A LCB1P25045 558 aaKnown RBP2.42□□□□□ -2.02
YHL009W-AYHL009W-A RER1P25560 188 aa2.42□□□□□ -2.02
YHL009W-AYHL009W-A CMK1P27466 446 aaKnown RBP2.42□□□□□ -2.02
YHL009W-AYHL009W-A DEG1P31115 442 aaKnown RBP2.42□□□□□ -2.02
YHL009W-AYHL009W-A SAC6P32599 642 aaKnown RBP2.42□□□□□ -2.02
YHL009W-AYHL009W-A YME1P32795 747 aa2.42□□□□□ -2.02
YHL009W-AYHL009W-A ECM15P35195 104 aa2.42□□□□□ -2.02
YHL009W-AYHL009W-A TUL1P36096 758 aa2.42□□□□□ -2.02
YHL009W-AYHL009W-A MRPL36P36531 177 aa2.42□□□□□ -2.02
YHL009W-AYHL009W-A DPB11P47027 764 aaPredicted RBP2.42□□□□□ -2.02
YHL009W-AYHL009W-A PIL1P53252 339 aaKnown RBP2.42□□□□□ -2.02
YHL009W-AYHL009W-A WSC2P53832 503 aa2.42□□□□□ -2.02
YHL009W-AYHL009W-A IST1P53843 298 aaPredicted RBP2.42□□□□□ -2.02
YHL009W-AYHL009W-A UBX4P54730 416 aa2.42□□□□□ -2.02
YHL009W-AYHL009W-A DIC1Q06143 298 aa2.42□□□□□ -2.02
YHL009W-AYHL009W-A SSK1Q07084 712 aa2.42□□□□□ -2.02
YHL009W-AYHL009W-A NAM9P27929 486 aa2.41□□□□□ -2.02
YHL009W-AYHL009W-A SNC1P31109 117 aa2.41□□□□□ -2.02
YHL009W-AYHL009W-A SPR1P32603 445 aa2.41□□□□□ -2.02
YHL009W-AYHL009W-A VPS4P52917 437 aa2.41□□□□□ -2.02
YHL009W-AYHL009W-A ZDS2P54786 942 aa2.41□□□□□ -2.02
YHL009W-AYHL009W-A THI20Q08224 551 aa2.41□□□□□ -2.02
YHL009W-AYHL009W-A RRP12Q12754 1228 aaKnown RBP2.41□□□□□ -2.02
YHL009W-AYHL009W-A YER078W-AQ3E7A2 54 aa2.41□□□□□ -2.02
YHL009W-AYHL009W-A HXK2P04807 486 aaKnown RBP2.4□□□□□ -2.03
YHL009W-AYHL009W-A SPT15P13393 240 aaKnown RBP2.4□□□□□ -2.03
YHL009W-AYHL009W-A SNU114P36048 1008 aaKnown RBP2.4□□□□□ -2.03
YHL009W-AYHL009W-A BUR6P40096 142 aa2.4□□□□□ -2.03
YHL009W-AYHL009W-A INN1P53901 409 aa2.4□□□□□ -2.03
YHL009W-AYHL009W-A RTT109Q07794 436 aa2.4□□□□□ -2.03
YHL009W-AYHL009W-A INP53Q12271 1107 aa2.4□□□□□ -2.03
YHL009W-AYHL009W-A YLR302CO13544 120 aa2.39□□□□□ -2.03
YHL009W-AYHL009W-A YBR085C-AO43137 85 aa2.39□□□□□ -2.03
YHL009W-AYHL009W-A FUN19P28003 413 aaPredicted RBP2.39□□□□□ -2.03
YHL009W-AYHL009W-A MRP20P32387 263 aa2.39□□□□□ -2.03
YHL009W-AYHL009W-A PMU1P36069 295 aa2.39□□□□□ -2.03
YHL009W-AYHL009W-A ALY1P36117 915 aa2.39□□□□□ -2.03
YHL009W-AYHL009W-A SMC3P47037 1230 aa2.39□□□□□ -2.03
YHL009W-AYHL009W-A MSO1P53604 210 aaKnown RBP2.39□□□□□ -2.03
YHL009W-AYHL009W-A PAP2P53632 584 aaKnown RBP2.39□□□□□ -2.03
YHL009W-AYHL009W-A RNY1Q02933 434 aaKnown RBP2.39□□□□□ -2.03
YHL009W-AYHL009W-A APL4Q12028 832 aa2.39□□□□□ -2.03
YHL009W-AYHL009W-A RPB2P08518 1224 aaKnown RBP2.38□□□□□ -2.03
YHL009W-AYHL009W-A YCR022CP25620 114 aa2.38□□□□□ -2.03
YHL009W-AYHL009W-A CDC15P27636 974 aa2.38□□□□□ -2.03
YHL009W-AYHL009W-A YIM1P28625 365 aa2.38□□□□□ -2.03
YHL009W-AYHL009W-A PAD1P33751 242 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
YHL009W-AYHL009W-A TEF4P36008 412 aaKnown RBP2.38□□□□□ -2.03
YHL009W-AYHL009W-A ROT2P38138 954 aa2.38□□□□□ -2.03
YHL009W-AYHL009W-A RFS1P38234 210 aaKnown RBP2.38□□□□□ -2.03
YHL009W-AYHL009W-A NDT80P38830 627 aa2.38□□□□□ -2.03
YHL009W-AYHL009W-A AXL2P38928 823 aa2.38□□□□□ -2.03
YHL009W-AYHL009W-A RPS7BP48164 190 aaKnown RBP2.38□□□□□ -2.03
YHL009W-AYHL009W-A LYS4P49367 693 aaPredicted RBP2.38□□□□□ -2.03
YHL009W-AYHL009W-A PYK2P52489 506 aaKnown RBP2.38□□□□□ -2.03
YHL009W-AYHL009W-A EMI2Q04409 500 aaKnown RBP2.38□□□□□ -2.03
YHL009W-AYHL009W-A SNO4Q04902 237 aa2.38□□□□□ -2.03
YHL009W-AYHL009W-A VID22Q05934 901 aa2.38□□□□□ -2.03
YHL009W-AYHL009W-A HSP33Q08914 237 aaKnown RBP2.38□□□□□ -2.03
YHL009W-AYHL009W-A HSP32Q08992 237 aa2.38□□□□□ -2.03
YHL009W-AYHL009W-A NUS1Q12063 375 aa2.38□□□□□ -2.03
YHL009W-AYHL009W-A YOL087CQ99247 1116 aa2.38□□□□□ -2.03
YHL009W-AYHL009W-A ATR1P13090 542 aa2.37□□□□□ -2.03
YHL009W-AYHL009W-A PFK2P16862 959 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
YHL009W-AYHL009W-A XRS2P33301 854 aa2.37□□□□□ -2.03
YHL009W-AYHL009W-A YBL059WP34224 193 aa2.37□□□□□ -2.03
YHL009W-AYHL009W-A MTR2P34232 184 aaKnown RBP2.37□□□□□ -2.03
YHL009W-AYHL009W-A YKL050CP35736 922 aa2.37□□□□□ -2.03
YHL009W-AYHL009W-A TSC10P38342 320 aa2.37□□□□□ -2.03
YHL009W-AYHL009W-A SLZ1P40167 298 aa2.37□□□□□ -2.03
YHL009W-AYHL009W-A RIC1P40395 1056 aa2.37□□□□□ -2.03
YHL009W-AYHL009W-A YGR210CP42942 411 aa2.37□□□□□ -2.03
YHL009W-AYHL009W-A RSM23Q01163 450 aa2.37□□□□□ -2.03
YHL009W-AYHL009W-A YPL014WQ02606 381 aa2.37□□□□□ -2.03
YHL009W-AYHL009W-A INA17Q02888 182 aa2.37□□□□□ -2.03
YHL009W-AYHL009W-A RRG7Q08774 242 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms