RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C MTO1P53070 669 aa10.67□□□□□ -0.7
SPC25YER018C GTR2P53290 341 aa10.67□□□□□ -0.7
SPC25YER018C NOP19P53317 196 aaPredicted RBP10.67□□□□□ -0.7
SPC25YER018C HST3P53687 447 aa10.67□□□□□ -0.7
SPC25YER018C LGE1Q02796 332 aaKnown RBP10.67□□□□□ -0.7
SPC25YER018C HPF1Q05164 967 aa10.67□□□□□ -0.7
SPC25YER018C YAR066WP0CX18 203 aa10.66□□□□□ -0.7
SPC25YER018C YHR214WP0CX19 203 aa10.66□□□□□ -0.7
SPC25YER018C GUK1P15454 187 aaKnown RBP10.66□□□□□ -0.7
SPC25YER018C YPT52P36018 234 aaKnown RBP10.66□□□□□ -0.7
SPC25YER018C YKL151CP36059 337 aa10.66□□□□□ -0.7
SPC25YER018C RPF2P36160 344 aaKnown RBP10.66□□□□□ -0.7
SPC25YER018C SCS2P40075 244 aaKnown RBP10.66□□□□□ -0.7
SPC25YER018C COQ5P49017 307 aa10.66□□□□□ -0.7
SPC25YER018C SHY1P53266 389 aa10.66□□□□□ -0.7
SPC25YER018C CUS2P53830 285 aaPredicted RBP10.66□□□□□ -0.7
SPC25YER018C NIS1P53939 407 aa10.66□□□□□ -0.7
SPC25YER018C REX2P54964 269 aaKnown RBP10.66□□□□□ -0.7
SPC25YER018C GTR1Q00582 310 aa10.66□□□□□ -0.7
SPC25YER018C FMN1Q03778 218 aa10.66□□□□□ -0.7
SPC25YER018C SPC24Q04477 213 aa10.66□□□□□ -0.7
SPC25YER018C YPL225WQ08971 146 aaKnown RBP10.66□□□□□ -0.7
SPC25YER018C MCD1Q12158 566 aa10.66□□□□□ -0.7
SPC25YER018C AHA1Q12449 350 aaKnown RBP10.66□□□□□ -0.7
SPC25YER018C NAG1Q8TGN9 163 aa10.66□□□□□ -0.7
SPC25YER018C FAB1P34756 2278 aa10.66□□□□□ -0.7
SPC25YER018C RSR1P13856 272 aa10.65□□□□□ -0.7
SPC25YER018C HSE1P38753 452 aa10.65□□□□□ -0.7
SPC25YER018C FRT2P39734 528 aa10.65□□□□□ -0.7
SPC25YER018C YJR154WP47181 346 aa10.65□□□□□ -0.7
SPC25YER018C YNL010WP53981 241 aaKnown RBP10.65□□□□□ -0.7
SPC25YER018C YDR338CQ05497 695 aa10.65□□□□□ -0.7
SPC25YER018C JIP5Q06214 492 aaPredicted RBP10.65□□□□□ -0.7
SPC25YER018C PST1Q12355 444 aa10.65□□□□□ -0.7
SPC25YER018C RRP36Q12481 300 aaPredicted RBP10.65□□□□□ -0.7
SPC25YER018C CAR1P00812 333 aaKnown RBP10.64□□□□□ -0.71
SPC25YER018C TRP3P00937 484 aa10.64□□□□□ -0.71
SPC25YER018C VPS34P22543 875 aa10.64□□□□□ -0.71
SPC25YER018C HCM1P25364 564 aa10.64□□□□□ -0.71
SPC25YER018C MLS1P30952 554 aa10.64□□□□□ -0.71
SPC25YER018C SDH3P33421 198 aa10.64□□□□□ -0.71
SPC25YER018C RRP3P38712 501 aaKnown RBP10.64□□□□□ -0.71
SPC25YER018C NPT1P39683 429 aaKnown RBP10.64□□□□□ -0.71
SPC25YER018C GIP4P39732 760 aa10.64□□□□□ -0.71
SPC25YER018C SPF1P39986 1215 aaKnown RBP10.64□□□□□ -0.71
SPC25YER018C ARB1P40024 610 aaKnown RBP10.64□□□□□ -0.71
SPC25YER018C YJL070CP40361 888 aa10.64□□□□□ -0.71
SPC25YER018C TMA22P47089 198 aaPredicted RBP10.64□□□□□ -0.71
SPC25YER018C YML131WQ03102 365 aa10.64□□□□□ -0.71
SPC25YER018C BCH1Q05029 724 aa10.64□□□□□ -0.71
SPC25YER018C YOL019WQ08157 551 aa10.64□□□□□ -0.71
SPC25YER018C SWI5P08153 709 aa10.63□□□□□ -0.71
SPC25YER018C COS2P0CX12 379 aa10.63□□□□□ -0.71
SPC25YER018C COS3P0CX13 379 aa10.63□□□□□ -0.71
SPC25YER018C RAD14P28519 371 aa10.63□□□□□ -0.71
SPC25YER018C SSE1P32589 693 aaKnown RBP10.63□□□□□ -0.71
SPC25YER018C SPR1P32603 445 aa10.63□□□□□ -0.71
SPC25YER018C CCT6P39079 546 aa10.63□□□□□ -0.71
SPC25YER018C YER034WP40022 185 aaKnown RBP10.63□□□□□ -0.71
SPC25YER018C COS4P43542 379 aa10.63□□□□□ -0.71
SPC25YER018C BIR1P47134 954 aa10.63□□□□□ -0.71
SPC25YER018C USE1P53146 245 aa10.63□□□□□ -0.71
SPC25YER018C NNF2P53253 936 aa10.63□□□□□ -0.71
SPC25YER018C ZRG17P53735 605 aa10.63□□□□□ -0.71
SPC25YER018C GAS3Q03655 524 aa10.63□□□□□ -0.71
SPC25YER018C GRS2Q06817 618 aa10.63□□□□□ -0.71
SPC25YER018C DIA2Q08496 732 aaPredicted RBP10.63□□□□□ -0.71
SPC25YER018C ESA1Q08649 445 aa10.63□□□□□ -0.71
SPC25YER018C VPS68Q12016 184 aa10.63□□□□□ -0.71
SPC25YER018C YLR049CQ12110 428 aa10.63□□□□□ -0.71
SPC25YER018C FUM1P08417 488 aaKnown RBP10.62□□□□□ -0.71
SPC25YER018C TUB1P09733 447 aaKnown RBP10.62□□□□□ -0.71
SPC25YER018C RNA1P11745 407 aaKnown RBP10.62□□□□□ -0.71
SPC25YER018C MET8P15807 274 aa10.62□□□□□ -0.71
SPC25YER018C SIS1P25294 352 aaKnown RBP10.62□□□□□ -0.71
SPC25YER018C BUB2P26448 306 aaPredicted RBP10.62□□□□□ -0.71
SPC25YER018C COX13P32799 129 aa10.62□□□□□ -0.71
SPC25YER018C SLX5P32828 619 aaKnown RBP10.62□□□□□ -0.71
SPC25YER018C SIP2P34164 415 aaKnown RBP10.62□□□□□ -0.71
SPC25YER018C PTC1P35182 281 aa10.62□□□□□ -0.71
SPC25YER018C YHL008CP38750 627 aa10.62□□□□□ -0.71
SPC25YER018C BAT1P38891 393 aaKnown RBP10.62□□□□□ -0.71
SPC25YER018C YEL073CP39974 107 aa10.62□□□□□ -0.71
SPC25YER018C YPL113CQ02961 396 aa10.62□□□□□ -0.71
SPC25YER018C YPL109CQ02981 657 aa10.62□□□□□ -0.71
SPC25YER018C YET2Q04210 160 aa10.62□□□□□ -0.71
SPC25YER018C YLL032CQ07834 825 aaKnown RBP RIP-Chip data10.62□□□□□ -0.71not detected
SPC25YER018C TFB4Q12004 338 aa10.62□□□□□ -0.71
SPC25YER018C YDR056CQ12025 205 aa10.62□□□□□ -0.71
SPC25YER018C ATG34Q12292 412 aa10.62□□□□□ -0.71
SPC25YER018C INH1P01097 85 aa10.61□□□□□ -0.71
SPC25YER018C PMR1P13586 950 aa10.61□□□□□ -0.71
SPC25YER018C PRP6P19735 899 aaPredicted RBP10.61□□□□□ -0.71
SPC25YER018C GFD2P25370 566 aaKnown RBP10.61□□□□□ -0.71
SPC25YER018C CRM1P30822 1084 aaKnown RBP10.61□□□□□ -0.71
SPC25YER018C GIC1P38785 314 aa10.61□□□□□ -0.71
SPC25YER018C GIM4P40005 111 aaKnown RBP10.61□□□□□ -0.71
SPC25YER018C EMP65P40085 556 aa10.61□□□□□ -0.71
SPC25YER018C FKH2P41813 862 aa10.61□□□□□ -0.71
SPC25YER018C PFA3P42836 336 aa10.61□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 80.7 ms