RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A MF(ALPHA)1P01149 165 aa3.39□□□□□ -1.87
YDR170W-AYDR170W-A ARG81P05085 880 aa3.39□□□□□ -1.87
YDR170W-AYDR170W-A SNF3P10870 884 aa3.39□□□□□ -1.87
YDR170W-AYDR170W-A SYN8P31377 255 aa3.39□□□□□ -1.87
YDR170W-AYDR170W-A PDR3P33200 976 aa3.39□□□□□ -1.87
YDR170W-AYDR170W-A PTR3P43606 678 aa3.39□□□□□ -1.87
YDR170W-AYDR170W-A IRC6P43615 237 aa3.39□□□□□ -1.87
YDR170W-AYDR170W-A RPS10BP46784 105 aaKnown RBP3.39□□□□□ -1.87
YDR170W-AYDR170W-A ARE2P53629 642 aaKnown RBP3.39□□□□□ -1.87
YDR170W-AYDR170W-A VPS75P53853 264 aa3.39□□□□□ -1.87
YDR170W-AYDR170W-A YNL181WP53878 407 aa3.39□□□□□ -1.87
YDR170W-AYDR170W-A EFM6P53970 246 aa3.39□□□□□ -1.87
YDR170W-AYDR170W-A TIM10P87108 93 aa3.39□□□□□ -1.87
YDR170W-AYDR170W-A RTT109Q07794 436 aa3.39□□□□□ -1.87
YDR170W-AYDR170W-A CTI6Q08923 506 aa3.39□□□□□ -1.87
YDR170W-AYDR170W-A YFL068WP0CX99 160 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A YLL066W-AP0CY00 160 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A YLL067W-AP0CY01 160 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A PUP3P25451 205 aaKnown RBP3.38□□□□□ -1.87
YDR170W-AYDR170W-A IMG1P25626 169 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A PEP3P27801 918 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A SSE2P32590 693 aaKnown RBP3.38□□□□□ -1.87
YDR170W-AYDR170W-A YBR144CP34215 104 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A MPE1P35728 441 aaKnown RBP3.38□□□□□ -1.87
YDR170W-AYDR170W-A UBP11P36026 717 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A YPK3P38070 525 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A ARC40P38328 384 aaKnown RBP3.38□□□□□ -1.87
YDR170W-AYDR170W-A UBA4P38820 440 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A PHO90P39535 881 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A NPR2P39923 615 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A MRX6P48564 524 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A PKP2P53170 491 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A YGR127WP53275 312 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A RSM23Q01163 450 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A DIG1Q03063 452 aaKnown RBP3.38□□□□□ -1.87
YDR170W-AYDR170W-A MFB1Q04922 465 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A YEH1Q07804 573 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A RDR1Q08904 546 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A FMP40Q08968 688 aaPredicted RBP3.38□□□□□ -1.87
YDR170W-AYDR170W-A RCN2Q12044 265 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A TAH18Q12181 623 aa3.38□□□□□ -1.87
YDR170W-AYDR170W-A PUT2P07275 575 aa3.37□□□□□ -1.87
YDR170W-AYDR170W-A EST1P17214 699 aaPredicted RBP3.37□□□□□ -1.87
YDR170W-AYDR170W-A YCR043CP25361 127 aa3.37□□□□□ -1.87
YDR170W-AYDR170W-A BOS1P25385 244 aa3.37□□□□□ -1.87
YDR170W-AYDR170W-A MGR1P25573 417 aa3.37□□□□□ -1.87
YDR170W-AYDR170W-A YBL055CP34220 418 aaPredicted RBP3.37□□□□□ -1.87
YDR170W-AYDR170W-A ROT2P38138 954 aa3.37□□□□□ -1.87
YDR170W-AYDR170W-A ICS2P38284 255 aa3.37□□□□□ -1.87
YDR170W-AYDR170W-A UTP9P38882 575 aaKnown RBP3.37□□□□□ -1.87
YDR170W-AYDR170W-A CCT4P39078 528 aaKnown RBP3.37□□□□□ -1.87
YDR170W-AYDR170W-A CCT6P39079 546 aa3.37□□□□□ -1.87
YDR170W-AYDR170W-A FAR3P46671 204 aa3.37□□□□□ -1.87
YDR170W-AYDR170W-A MRPL19P53875 158 aa3.37□□□□□ -1.87
YDR170W-AYDR170W-A BET4Q00618 327 aa3.37□□□□□ -1.87
YDR170W-AYDR170W-A YPT6Q99260 215 aa3.37□□□□□ -1.87
YDR170W-AYDR170W-A BUD5P25300 642 aaPredicted RBP3.36□□□□□ -1.87
YDR170W-AYDR170W-A OCA4P25366 362 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A MTR2P34232 184 aaKnown RBP3.36□□□□□ -1.87
YDR170W-AYDR170W-A YKL100CP34248 587 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A NUP133P36161 1157 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A MET30P39014 640 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A RGI2P40188 164 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A RTS2P40962 232 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A ARF3P40994 183 aaRIP-Chip data3.36□□□□□ -1.87not detected
YDR170W-AYDR170W-A IAH1P41734 238 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A TES1P41903 349 aaKnown RBP3.36□□□□□ -1.87
YDR170W-AYDR170W-A MAF1P41910 395 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A RMD8P43620 662 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A SOL4P53315 255 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A NUP100Q02629 959 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A SMA1Q02651 245 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A SPC19Q03954 165 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A TAF11Q04226 346 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A YMR254CQ04838 102 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A ETT1Q08421 412 aaKnown RBP3.36□□□□□ -1.87
YDR170W-AYDR170W-A SRL1Q08673 210 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A BUD7Q08754 746 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A SCM3Q12334 223 aa3.36□□□□□ -1.87
YDR170W-AYDR170W-A SGS1P35187 1447 aa3.35□□□□□ -1.87
YDR170W-AYDR170W-A ARG3P05150 338 aa3.35□□□□□ -1.87
YDR170W-AYDR170W-A MRP13P12686 339 aa3.35□□□□□ -1.87
YDR170W-AYDR170W-A CBS1P14066 229 aa3.35□□□□□ -1.87
YDR170W-AYDR170W-A GID7P25569 745 aa3.35□□□□□ -1.87
YDR170W-AYDR170W-A TIF3P34167 436 aaKnown RBP3.35□□□□□ -1.87
YDR170W-AYDR170W-A RPL32P38061 130 aaKnown RBP3.35□□□□□ -1.87
YDR170W-AYDR170W-A REG2P38232 338 aa3.35□□□□□ -1.87
YDR170W-AYDR170W-A YIL169CP40442 995 aa3.35□□□□□ -1.87
YDR170W-AYDR170W-A SGN1P40561 250 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
YDR170W-AYDR170W-A APT1P49435 187 aaKnown RBP3.35□□□□□ -1.87
YDR170W-AYDR170W-A PYK2P52489 506 aaKnown RBP3.35□□□□□ -1.87
YDR170W-AYDR170W-A VID30P53076 958 aa3.35□□□□□ -1.87
YDR170W-AYDR170W-A HOS2P53096 452 aaPredicted RBP3.35□□□□□ -1.87
YDR170W-AYDR170W-A YGR066CP53242 292 aa3.35□□□□□ -1.87
YDR170W-AYDR170W-A IPI3P53877 555 aa3.35□□□□□ -1.87
YDR170W-AYDR170W-A APL5Q08951 932 aaKnown RBP3.35□□□□□ -1.87
YDR170W-AYDR170W-A YJR112W-AQ3E743 109 aa3.35□□□□□ -1.87
YDR170W-AYDR170W-A CKA1P15790 372 aa3.34□□□□□ -1.87
YDR170W-AYDR170W-A ART10P18634 518 aaKnown RBP3.34□□□□□ -1.87
YDR170W-AYDR170W-A MCM4P30665 933 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms