RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C MDJ2P42834 146 aa5.73□□□□□ -1.49
MDH3YDL078C STB2P46679 850 aa5.73□□□□□ -1.49
MDH3YDL078C ALB1P47019 175 aaPredicted RBP5.73□□□□□ -1.49
MDH3YDL078C ECL1P48235 211 aa5.73□□□□□ -1.49
MDH3YDL078C OCA1P50946 238 aaPredicted RBP5.73□□□□□ -1.49
MDH3YDL078C SAP4P53036 818 aa5.73□□□□□ -1.49
MDH3YDL078C RTA1P53047 317 aa5.73□□□□□ -1.49
MDH3YDL078C MTO1P53070 669 aa5.73□□□□□ -1.49
MDH3YDL078C COG1P53079 417 aa5.73□□□□□ -1.49
MDH3YDL078C YGR266WP53326 701 aa5.73□□□□□ -1.49
MDH3YDL078C SNO2P53823 222 aa5.73□□□□□ -1.49
MDH3YDL078C TGL2P54857 326 aa5.73□□□□□ -1.49
MDH3YDL078C RPL22BP56628 122 aaKnown RBP5.73□□□□□ -1.49
MDH3YDL078C UTP6Q02354 440 aaKnown RBP5.73□□□□□ -1.49
MDH3YDL078C NUP100Q02629 959 aa5.73□□□□□ -1.49
MDH3YDL078C SLU7Q02775 382 aaKnown RBP5.73□□□□□ -1.49
MDH3YDL078C SNZ1Q03148 297 aa5.73□□□□□ -1.49
MDH3YDL078C URH1Q04179 340 aa5.73□□□□□ -1.49
MDH3YDL078C PNP1Q05788 311 aa5.73□□□□□ -1.49
MDH3YDL078C ATG17Q06410 417 aa5.73□□□□□ -1.49
MDH3YDL078C MCP2Q06567 569 aa5.73□□□□□ -1.49
MDH3YDL078C OPT2Q06593 877 aa5.73□□□□□ -1.49
MDH3YDL078C PUN1Q06991 263 aa5.73□□□□□ -1.49
MDH3YDL078C IMA2Q08295 589 aa5.73□□□□□ -1.49
MDH3YDL078C YOR352WQ08816 343 aa5.73□□□□□ -1.49
MDH3YDL078C TGL5Q12043 749 aa5.73□□□□□ -1.49
MDH3YDL078C ATP16Q12165 160 aa5.73□□□□□ -1.49
MDH3YDL078C LDB17Q12342 491 aa5.73□□□□□ -1.49
MDH3YDL078C FRT1Q99332 602 aa5.73□□□□□ -1.49
MDH3YDL078C CMP2P14747 604 aa5.72□□□□□ -1.49
MDH3YDL078C APA1P16550 321 aaKnown RBP5.72□□□□□ -1.49
MDH3YDL078C YAP1P19880 650 aaKnown RBP5.72□□□□□ -1.49
MDH3YDL078C UBA1P22515 1024 aaKnown RBP5.72□□□□□ -1.49
MDH3YDL078C ERG6P25087 383 aaKnown RBP5.72□□□□□ -1.49
MDH3YDL078C SNT1P25357 1226 aa5.72□□□□□ -1.49
MDH3YDL078C VPH2P32341 215 aa5.72□□□□□ -1.49
MDH3YDL078C PLC1P32383 869 aa5.72□□□□□ -1.49
MDH3YDL078C GCG1P32656 232 aaKnown RBP5.72□□□□□ -1.49
MDH3YDL078C IMP3P32899 183 aaPredicted RBP5.72□□□□□ -1.49
MDH3YDL078C SRP101P32916 621 aa5.72□□□□□ -1.49
MDH3YDL078C UBC6P33296 250 aaPredicted RBP5.72□□□□□ -1.49
MDH3YDL078C LOS1P33418 1100 aaPredicted RBP5.72□□□□□ -1.49
MDH3YDL078C SQT1P35184 431 aa5.72□□□□□ -1.49
MDH3YDL078C UTH1P36135 365 aa5.72□□□□□ -1.49
MDH3YDL078C PBP2P38151 413 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
MDH3YDL078C MUM2P38236 366 aa5.72□□□□□ -1.49
MDH3YDL078C YBR259WP38338 688 aa5.72□□□□□ -1.49
MDH3YDL078C YPT35P38815 214 aaKnown RBP5.72□□□□□ -1.49
MDH3YDL078C SCS2P40075 244 aaKnown RBP5.72□□□□□ -1.49
MDH3YDL078C DPH1P40487 425 aaKnown RBP5.72□□□□□ -1.49
MDH3YDL078C YGL176CP46945 554 aa5.72□□□□□ -1.49
MDH3YDL078C URB2P47108 1174 aa5.72□□□□□ -1.49
MDH3YDL078C IMD4P50094 524 aaKnown RBP5.72□□□□□ -1.49
MDH3YDL078C MPS2P53159 387 aa5.72□□□□□ -1.49
MDH3YDL078C SWC4P53201 476 aa5.72□□□□□ -1.49
MDH3YDL078C TFB2Q02939 513 aa5.72□□□□□ -1.49
MDH3YDL078C VTI1Q04338 217 aa5.72□□□□□ -1.49
MDH3YDL078C SPC24Q04477 213 aa5.72□□□□□ -1.49
MDH3YDL078C CIA1Q05583 330 aa5.72□□□□□ -1.49
MDH3YDL078C SFH1Q06168 426 aa5.72□□□□□ -1.49
MDH3YDL078C EAF1Q06337 982 aa5.72□□□□□ -1.49
MDH3YDL078C YFT2Q06676 274 aa5.72□□□□□ -1.49
MDH3YDL078C HBT1Q07653 1046 aaKnown RBP5.72□□□□□ -1.49
MDH3YDL078C ADY3Q07732 790 aa5.72□□□□□ -1.49
MDH3YDL078C RSA1Q08932 381 aa5.72□□□□□ -1.49
MDH3YDL078C RTK1Q12100 620 aaPredicted RBP5.72□□□□□ -1.49
MDH3YDL078C POL2P21951 2222 aaKnown RBP5.72□□□□□ -1.49
MDH3YDL078C INH1P01097 85 aa5.71□□□□□ -1.5
MDH3YDL078C MPH2P0CD99 609 aa5.71□□□□□ -1.5
MDH3YDL078C STE6P12866 1290 aa5.71□□□□□ -1.5
MDH3YDL078C HSP60P19882 572 aaKnown RBP5.71□□□□□ -1.5
MDH3YDL078C GID7P25569 745 aa5.71□□□□□ -1.5
MDH3YDL078C MGT1P26188 188 aa5.71□□□□□ -1.5
MDH3YDL078C ACP1P32463 125 aa5.71□□□□□ -1.5
MDH3YDL078C SPS19P32573 292 aaKnown RBP5.71□□□□□ -1.5
MDH3YDL078C HCS1P34243 683 aa5.71□□□□□ -1.5
MDH3YDL078C IRS4P36115 615 aaKnown RBP5.71□□□□□ -1.5
MDH3YDL078C MAK5P38112 773 aaPredicted RBP5.71□□□□□ -1.5
MDH3YDL078C HXT6P39003 570 aaKnown RBP5.71□□□□□ -1.5
MDH3YDL078C HXT7P39004 570 aa5.71□□□□□ -1.5
MDH3YDL078C MPT5P39016 859 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
MDH3YDL078C CCT6P39079 546 aa5.71□□□□□ -1.5
MDH3YDL078C TES1P41903 349 aaKnown RBP5.71□□□□□ -1.5
MDH3YDL078C YFR018CP43599 363 aa5.71□□□□□ -1.5
MDH3YDL078C MDV1P47025 714 aa5.71□□□□□ -1.5
MDH3YDL078C TAH11P47112 604 aa5.71□□□□□ -1.5
MDH3YDL078C NBP35P52920 328 aa5.71□□□□□ -1.5
MDH3YDL078C SWS2P53937 143 aa5.71□□□□□ -1.5
MDH3YDL078C SWP1Q02795 286 aa5.71□□□□□ -1.5
MDH3YDL078C TRM82Q03774 444 aa5.71□□□□□ -1.5
MDH3YDL078C YMR160WQ03823 816 aa5.71□□□□□ -1.5
MDH3YDL078C YDR132CQ03900 495 aa5.71□□□□□ -1.5
MDH3YDL078C ARR2Q06597 130 aa5.71□□□□□ -1.5
MDH3YDL078C RTT10Q08924 1013 aa5.71□□□□□ -1.5
MDH3YDL078C SRO7Q12038 1033 aa5.71□□□□□ -1.5
MDH3YDL078C RAD1P06777 1100 aa5.7□□□□□ -1.5
MDH3YDL078C GCR1P07261 785 aa5.7□□□□□ -1.5
MDH3YDL078C SBP1P10080 294 aaKnown RBP5.7□□□□□ -1.5
MDH3YDL078C SPO16P17122 198 aa5.7□□□□□ -1.5
MDH3YDL078C EPT1P22140 391 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms