RNA–Protein interactions for RNA: ENST00000640688.1

GABRD-216, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 3

Gene GABRD, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-216ENST00000640688 ZNF536O15090 1300 aa23.45■■□□□ 1.34
GABRD-216ENST00000640688 ERC2O15083 957 aa23.45■■□□□ 1.34
GABRD-216ENST00000640688 CTDSPL2Q05D32 466 aa23.45■■□□□ 1.34
GABRD-216ENST00000640688 PDE4BQ07343 736 aa23.45■■□□□ 1.34
GABRD-216ENST00000640688 CCDC144BQ3MJ40 725 aa23.45■■□□□ 1.34
GABRD-216ENST00000640688 AGBL1Q96MI9 1066 aa23.45■■□□□ 1.34
GABRD-216ENST00000640688 CDX2Q99626 313 aaPredicted RBP23.45■■□□□ 1.34
GABRD-216ENST00000640688 TTYH1Q9H313 450 aaPredicted RBP23.45■■□□□ 1.34
GABRD-216ENST00000640688 TMEM39AQ9NV64 488 aa23.45■■□□□ 1.34
GABRD-216ENST00000640688 SYNPO2Q9UMS6 1093 aa23.45■■□□□ 1.34
GABRD-216ENST00000640688 DDX49Q9Y6V7 483 aaKnown RBP23.45■■□□□ 1.34
GABRD-216ENST00000640688 SALL3Q9BXA9 1300 aa23.44■■□□□ 1.34
GABRD-216ENST00000640688 NMT2O60551 498 aa23.44■■□□□ 1.34
GABRD-216ENST00000640688 DUSP11O75319 330 aaKnown RBP23.44■■□□□ 1.34
GABRD-216ENST00000640688 RAG1P15918 1043 aa23.44■■□□□ 1.34
GABRD-216ENST00000640688 SNAP25P60880 206 aa23.44■■□□□ 1.34
GABRD-216ENST00000640688 LRRFIP1Q32MZ4 808 aaKnown RBP23.44■■□□□ 1.34
GABRD-216ENST00000640688 ARMCX2Q7L311 632 aa23.44■■□□□ 1.34
GABRD-216ENST00000640688 ANKRD33Q7Z3H0 272 aa23.44■■□□□ 1.34
GABRD-216ENST00000640688 CHST13Q8NET6 341 aa23.44■■□□□ 1.34
GABRD-216ENST00000640688 KATNBL1Q9H079 304 aa23.44■■□□□ 1.34
GABRD-216ENST00000640688 ISY1Q9ULR0 285 aaKnown RBP23.44■■□□□ 1.34
GABRD-216ENST00000640688 MX1P20591 662 aa23.43■■□□□ 1.34
GABRD-216ENST00000640688 MCCP23508 829 aa23.43■■□□□ 1.34
GABRD-216ENST00000640688 OAZ1P54368 228 aa23.43■■□□□ 1.34
GABRD-216ENST00000640688 VPS53Q5VIR6 699 aa23.43■■□□□ 1.34
GABRD-216ENST00000640688 CCDC144CPQ8IYA2 1237 aa23.43■■□□□ 1.34
GABRD-216ENST00000640688 IL17RBQ9NRM6 502 aa23.43■■□□□ 1.34
GABRD-216ENST00000640688 FBXO40Q9UH90 709 aa23.43■■□□□ 1.34
GABRD-216ENST00000640688 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.43■■□□□ 1.34
GABRD-216ENST00000640688 MOXD2PA6NHM9 499 aa23.42■■□□□ 1.34
GABRD-216ENST00000640688 ASGR1P07306 291 aa23.42■■□□□ 1.34
GABRD-216ENST00000640688 C6orf222P0C671 652 aaPredicted RBP23.42■■□□□ 1.34
GABRD-216ENST00000640688 PTGS1P23219 599 aa23.42■■□□□ 1.34
GABRD-216ENST00000640688 STAT2P52630 851 aa23.42■■□□□ 1.34
GABRD-216ENST00000640688 SMAD3P84022 425 aaKnown RBP23.42■■□□□ 1.34
GABRD-216ENST00000640688 KCTD1Q719H9 257 aa23.42■■□□□ 1.34
GABRD-216ENST00000640688 NUP133Q8WUM0 1156 aa23.42■■□□□ 1.34
GABRD-216ENST00000640688 RNPC3Q96LT9 517 aaKnown RBP23.42■■□□□ 1.34
GABRD-216ENST00000640688 TOX2Q96NM4 488 aa23.42■■□□□ 1.34
GABRD-216ENST00000640688 ABHD16BQ9H3Z7 469 aa23.42■■□□□ 1.34
GABRD-216ENST00000640688 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.41■■□□□ 1.34
GABRD-216ENST00000640688 SOWAHBA6NEL2 793 aa23.41■■□□□ 1.34
GABRD-216ENST00000640688 CTAGE5O15320 804 aa23.41■■□□□ 1.34
GABRD-216ENST00000640688 CST5P28325 142 aaPredicted RBP23.41■■□□□ 1.34
GABRD-216ENST00000640688 SLC1A4P43007 532 aa23.41■■□□□ 1.34
GABRD-216ENST00000640688 FPGSQ05932 587 aa23.41■■□□□ 1.34
GABRD-216ENST00000640688 FAM133AQ8N9E0 248 aa23.41■■□□□ 1.34
GABRD-216ENST00000640688 STAG1Q8WVM7 1258 aa23.41■■□□□ 1.34
GABRD-216ENST00000640688 GMCL1Q96IK5 515 aa23.41■■□□□ 1.34
GABRD-216ENST00000640688 UPF3AQ9H1J1 476 aaKnown RBP23.41■■□□□ 1.34
GABRD-216ENST00000640688 A1CFQ9NQ94 594 aaKnown RBP23.41■■□□□ 1.34
GABRD-216ENST00000640688 STX8Q9UNK0 236 aa23.41■■□□□ 1.34
GABRD-216ENST00000640688 ASTN1O14525 1302 aa23.4■■□□□ 1.34
GABRD-216ENST00000640688 LCTP09848 1927 aa23.4■■□□□ 1.34
GABRD-216ENST00000640688 DCDC2CA8MYV0 355 aa23.4■■□□□ 1.34
GABRD-216ENST00000640688 SLC3A2P08195 630 aaKnown RBP23.4■■□□□ 1.34
GABRD-216ENST00000640688 CDK7P50613 346 aa23.4■■□□□ 1.34
GABRD-216ENST00000640688 GJA9P57773 515 aa23.4■■□□□ 1.34
GABRD-216ENST00000640688 CCDC174Q6PII3 467 aa23.4■■□□□ 1.34
GABRD-216ENST00000640688 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.4■■□□□ 1.34
GABRD-216ENST00000640688 MYLIPQ8WY64 445 aa23.4■■□□□ 1.34
GABRD-216ENST00000640688 ACAD9Q9H845 621 aa23.4■■□□□ 1.34
GABRD-216ENST00000640688 RNF146Q9NTX7 359 aa23.4■■□□□ 1.34
GABRD-216ENST00000640688 TBX21Q9UL17 535 aa23.4■■□□□ 1.34
GABRD-216ENST00000640688 LRRC37A2A6NM11 1700 aa23.39■■□□□ 1.34
GABRD-216ENST00000640688 BEX3Q00994 111 aa23.39■■□□□ 1.33
GABRD-216ENST00000640688 IKQ13123 557 aaPredicted RBP23.39■■□□□ 1.33
GABRD-216ENST00000640688 GLT1D1Q96MS3 346 aa23.39■■□□□ 1.33
GABRD-216ENST00000640688 COL25A1Q9BXS0 654 aaPredicted RBP23.39■■□□□ 1.33
GABRD-216ENST00000640688 MTMR7Q9Y216 660 aa23.39■■□□□ 1.33
GABRD-216ENST00000640688 SPTBN5Q9NRC6 3674 aaKnown RBP23.38■■□□□ 1.33
GABRD-216ENST00000640688 ELP1O95163 1332 aa23.38■■□□□ 1.33
GABRD-216ENST00000640688 TSPY2A6NKD2 308 aa23.38■■□□□ 1.33
GABRD-216ENST00000640688 TIMP1P01033 207 aa23.38■■□□□ 1.33
GABRD-216ENST00000640688 MUM1L1Q5H9M0 696 aa23.38■■□□□ 1.33
GABRD-216ENST00000640688 GNASQ5JWF2 1037 aa23.38■■□□□ 1.33
GABRD-216ENST00000640688 FAM160B2Q86V87 743 aa23.38■■□□□ 1.33
GABRD-216ENST00000640688 CHURC1Q8WUH1 139 aa23.38■■□□□ 1.33
GABRD-216ENST00000640688 TRERF1Q96PN7 1200 aa23.38■■□□□ 1.33
GABRD-216ENST00000640688 PURBQ96QR8 312 aaKnown RBP23.38■■□□□ 1.33
GABRD-216ENST00000640688 FDX1P10109 184 aa23.37■■□□□ 1.33
GABRD-216ENST00000640688 ALAS1P13196 640 aa23.37■■□□□ 1.33
GABRD-216ENST00000640688 ANKRD45Q5TZF3 282 aa23.37■■□□□ 1.33
GABRD-216ENST00000640688 RCSD1Q6JBY9 416 aa23.37■■□□□ 1.33
GABRD-216ENST00000640688 PCSK9Q8NBP7 692 aaKnown RBP23.37■■□□□ 1.33
GABRD-216ENST00000640688 VTI1AQ96AJ9 217 aa23.37■■□□□ 1.33
GABRD-216ENST00000640688 PRR12Q9ULL5 1215 aa23.37■■□□□ 1.33
GABRD-216ENST00000640688 RANBP6O60518 1105 aaKnown RBP23.36■■□□□ 1.33
GABRD-216ENST00000640688 TMEM63BQ5T3F8 832 aa23.36■■□□□ 1.33
GABRD-216ENST00000640688 C16orf59Q7L2K0 433 aa23.36■■□□□ 1.33
GABRD-216ENST00000640688 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.36■■□□□ 1.33
GABRD-216ENST00000640688 SPC25Q9HBM1 224 aa23.36■■□□□ 1.33
GABRD-216ENST00000640688 A0A0U1RQG5 324 aaPredicted RBP23.35■■□□□ 1.33
GABRD-216ENST00000640688 ARVCFO00192 962 aa23.35■■□□□ 1.33
GABRD-216ENST00000640688 PLA2G6O60733 806 aa23.35■■□□□ 1.33
GABRD-216ENST00000640688 RRP1P56182 461 aaKnown RBP23.35■■□□□ 1.33
GABRD-216ENST00000640688 TNFAIP2Q03169 654 aa23.35■■□□□ 1.33
GABRD-216ENST00000640688 TTBK2Q6IQ55 1244 aa23.35■■□□□ 1.33
GABRD-216ENST00000640688 MAFAQ8NHW3 353 aaPredicted RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms