RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 PARD6BQ9BYG5 372 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 CDC27P30260 824 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 HLTFQ14527 1009 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 HAUS3Q68CZ6 603 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 ENAHQ8N8S7 591 aaPredicted RBP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 BBXQ8WY36 941 aaPredicted RBP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 SAMSN1Q9NSI8 373 aaKnown RBP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 JRKLQ9Y4A0 524 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 ACTN4O43707 911 aaKnown RBP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 TBCAO75347 108 aaKnown RBP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 NDUFA10O95299 355 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 TMTC3Q6ZXV5 915 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 PIGBQ92521 554 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 ZHX3Q9H4I2 956 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 ST5P78524 1137 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 TBC1D5Q92609 795 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 AIFM3Q96NN9 605 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 EHMT1Q9H9B1 1298 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 RNF216Q9NWF9 866 aaPredicted RBP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 TNS2Q63HR2 1409 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 CSF1RP07333 972 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 ARHGAP25P42331 645 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 CUL5Q93034 780 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 SPAG5Q96R06 1193 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 PIH1D3Q9NQM4 214 aaKnown RBP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 BSDC1Q9NW68 430 aaPredicted RBP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 NID2Q14112 1375 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 PHACTR2O75167 634 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 OR52Z1P0C646 297 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 CRKLP46109 303 aaKnown RBP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 PDE4DQ08499 809 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 IFFO1Q0D2I5 559 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 NKX1-1Q15270 411 aaPredicted RBP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 PPP2R5EQ16537 467 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 HNRNPLLQ8WVV9 542 aaKnown RBP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 TUBGCP2Q9BSJ2 902 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 PLVAPQ9BX97 442 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 VIPAS39Q9H9C1 493 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 MPHOSPH10O00566 681 aaKnown RBP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 FLOT1O75955 427 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 MATR3P43243 847 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCN3A-210ENST00000640652 PAK2Q13177 524 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 CLEC4GQ6UXB4 293 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 C2CD5Q86YS7 1000 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 BLZF1Q9H2G9 400 aa6.19□□□□□ -1.42
SCN3A-210ENST00000640652 NUP205Q92621 2012 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 FAM237AA0A1B0GTK4 181 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 A0A1W2PQC6 194 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 GCOM1H8Y6P7 765 aaPredicted RBP6.18□□□□□ -1.42
SCN3A-210ENST00000640652 MYZAPP0CAP1 466 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 RPL13P26373 211 aaKnown RBP6.18□□□□□ -1.42
SCN3A-210ENST00000640652 CASP7P55210 303 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 PTPAQ15257 358 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 ARFGAP2Q8N6H7 521 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 PNMA1Q8ND90 353 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 DRC1Q96MC2 740 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 FBXO2Q9UK22 296 aaPredicted RBP6.18□□□□□ -1.42
SCN3A-210ENST00000640652 LGALS16A8MUM7 142 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 TRAF1Q13077 416 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 MAATS1Q7Z4T9 603 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 CCDC65Q8IXS2 484 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 GPHNQ9NQX3 736 aaPredicted RBP6.18□□□□□ -1.42
SCN3A-210ENST00000640652 ASAP1Q9ULH1 1129 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 PRDM1O75626 825 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 TCP1P17987 556 aaKnown RBP6.18□□□□□ -1.42
SCN3A-210ENST00000640652 HIBADHP31937 336 aaKnown RBP6.18□□□□□ -1.42
SCN3A-210ENST00000640652 ACTN2P35609 894 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 NONOQ15233 471 aaKnown RBP eCLIP6.18□□□□□ -1.42
SCN3A-210ENST00000640652 SYCE1Q8N0S2 351 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 EPSTI1Q96J88 318 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 RNF14Q9UBS8 474 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 POLR2AP24928 1970 aaKnown RBP6.18□□□□□ -1.42
SCN3A-210ENST00000640652 LRRC63Q05C16 580 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 SEPT2Q15019 361 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 SKIDA1Q1XH10 827 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 C10orf76Q5T2E6 689 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 GRAMD1CQ8IYS0 662 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 GJB4Q9NTQ9 266 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 BZW2Q9Y6E2 419 aaKnown RBP6.18□□□□□ -1.42
SCN3A-210ENST00000640652 COL22A1Q8NFW1 1626 aaPredicted RBP6.18□□□□□ -1.42
SCN3A-210ENST00000640652 ZNF76P36508 570 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 APBA1Q02410 837 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 TNIP1Q15025 636 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 CMTR1Q8N1G2 835 aaKnown RBP6.18□□□□□ -1.42
SCN3A-210ENST00000640652 TBC1D22AQ8WUA7 517 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 GOLGA8KD6RF30 607 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 ADCY7P51828 1080 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 LETM2Q2VYF4 491 aa6.18□□□□□ -1.42
SCN3A-210ENST00000640652 SMYD4Q8IYR2 804 aaPredicted RBP6.18□□□□□ -1.42
SCN3A-210ENST00000640652 PDS5AQ29RF7 1337 aaKnown RBP6.18□□□□□ -1.42
SCN3A-210ENST00000640652 DPYDQ12882 1025 aa6.17□□□□□ -1.42
SCN3A-210ENST00000640652 KCNB1Q14721 858 aa6.17□□□□□ -1.42
SCN3A-210ENST00000640652 INF2Q27J81 1249 aa6.17□□□□□ -1.42
SCN3A-210ENST00000640652 SFMBT2Q5VUG0 894 aa6.17□□□□□ -1.42
SCN3A-210ENST00000640652 SLC35F6Q8N357 371 aa6.17□□□□□ -1.42
SCN3A-210ENST00000640652 ADAM21Q9UKJ8 722 aa6.17□□□□□ -1.42
SCN3A-210ENST00000640652 DOCK5Q9H7D0 1870 aa6.17□□□□□ -1.42
SCN3A-210ENST00000640652 SPDYE3A6NKU9 549 aa6.17□□□□□ -1.42
SCN3A-210ENST00000640652 ZNF18P17022 549 aa6.17□□□□□ -1.42
SCN3A-210ENST00000640652 CYP2C19P33261 490 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms