RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 PRPF38AQ8NAV1 312 aaKnown RBP10.11□□□□□ -0.79
HLA-B-258ENST00000640615 PROCA1Q8NCQ7 364 aaPredicted RBP10.11□□□□□ -0.79
HLA-B-258ENST00000640615 FBXO18Q8NFZ0 1043 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 MTMR8Q96EF0 704 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 CAPNS2Q96L46 248 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 KCNJ14Q9UNX9 436 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 ZDHHC9Q9Y397 364 aa10.11□□□□□ -0.79
HLA-B-258ENST00000640615 CTDP1Q9Y5B0 961 aaPredicted RBP10.11□□□□□ -0.79
HLA-B-258ENST00000640615 STXBP3O00186 592 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 PPP1R11O60927 126 aaPredicted RBP10.1□□□□□ -0.79
HLA-B-258ENST00000640615 ZBED4O75132 1171 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 ZBTB48P10074 688 aaPredicted RBP10.1□□□□□ -0.79
HLA-B-258ENST00000640615 CETPP11597 493 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 NAPAP54920 295 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 NLRP5P59047 1200 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 COG2Q14746 738 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 SAFBQ15424 915 aaKnown RBP eCLIP10.1□□□□□ -0.79
HLA-B-258ENST00000640615 FERMT3Q86UX7 667 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 FBXO11Q86XK2 927 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 CCDC12Q8WUD4 166 aaPredicted RBP10.1□□□□□ -0.79
HLA-B-258ENST00000640615 COA7Q96BR5 231 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 RANBP17Q9H2T7 1088 aaKnown RBP10.1□□□□□ -0.79
HLA-B-258ENST00000640615 SH3GLB2Q9NR46 395 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 BARHL2Q9NY43 387 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 HOXC10Q9NYD6 342 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 PPP1R9AQ9ULJ8 1098 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 OTOFQ9HC10 1997 aa10.1□□□□□ -0.79
HLA-B-258ENST00000640615 CCL15-CCL14A0A0B4J2E2 113 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 hCG_1984214I3L0E3 225 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 F13A1P00488 732 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 MMP1P03956 469 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 OSBPP22059 807 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 HOXA7P31268 230 aaPredicted RBP10.09□□□□□ -0.79
HLA-B-258ENST00000640615 DSG3P32926 999 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 RGS19P49795 217 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 IRX3P78415 501 aaPredicted RBP10.09□□□□□ -0.79
HLA-B-258ENST00000640615 PABPC4Q13310 644 aaKnown RBP eCLIP10.09□□□□□ -0.79
HLA-B-258ENST00000640615 MOGSQ13724 837 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 GNL2Q13823 731 aaKnown RBP10.09□□□□□ -0.79
HLA-B-258ENST00000640615 CCL15Q16663 113 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 USH1GQ495M9 461 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 GPAT2Q6NUI2 795 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 PAXIP1Q6ZW49 1069 aaPredicted RBP10.09□□□□□ -0.79
HLA-B-258ENST00000640615 RASAL3Q86YV0 1011 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 ZNF713Q8N859 430 aaPredicted RBP10.09□□□□□ -0.79
HLA-B-258ENST00000640615 RGS22Q8NE09 1264 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 CCDC148Q8NFR7 591 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 SHISA4Q96DD7 197 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 ATG4CQ96DT6 458 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 ABHD8Q96I13 439 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 MS4A4AQ96JQ5 239 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 PHF20Q9BVI0 1012 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 AMNQ9BXJ7 453 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 BRMS1Q9HCU9 246 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 AGTPBP1Q9UPW5 1226 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 PCDHA1Q9Y5I3 950 aa10.09□□□□□ -0.79
HLA-B-258ENST00000640615 SMCO2A6NFE2 343 aa10.08□□□□□ -0.8
HLA-B-258ENST00000640615 VWA5AO00534 786 aa10.08□□□□□ -0.8
HLA-B-258ENST00000640615 FDX1P10109 184 aa10.08□□□□□ -0.8
HLA-B-258ENST00000640615 CALML3P27482 149 aa10.08□□□□□ -0.8
HLA-B-258ENST00000640615 KRT2P35908 639 aa10.08□□□□□ -0.8
HLA-B-258ENST00000640615 TRAF1Q13077 416 aa10.08□□□□□ -0.8
HLA-B-258ENST00000640615 FOXD4L6Q3SYB3 417 aaPredicted RBP10.08□□□□□ -0.8
HLA-B-258ENST00000640615 CYP4F22Q6NT55 531 aa10.08□□□□□ -0.8
HLA-B-258ENST00000640615 TYW1BQ6NUM6 668 aa10.08□□□□□ -0.8
HLA-B-258ENST00000640615 FOXD4L3Q6VB84 417 aaPredicted RBP10.08□□□□□ -0.8
HLA-B-258ENST00000640615 DIS3L2Q8IYB7 885 aaKnown RBP10.08□□□□□ -0.8
HLA-B-258ENST00000640615 CPXCR1Q8N123 301 aa10.08□□□□□ -0.8
HLA-B-258ENST00000640615 BRI3BPQ8WY22 251 aa10.08□□□□□ -0.8
HLA-B-258ENST00000640615 TNPO1Q92973 898 aaKnown RBP10.08□□□□□ -0.8
HLA-B-258ENST00000640615 CCDC102AQ96A19 550 aa10.08□□□□□ -0.8
HLA-B-258ENST00000640615 P2RX7Q99572 595 aaKnown RBP10.08□□□□□ -0.8
HLA-B-258ENST00000640615 ASCC2Q9H1I8 757 aaPredicted RBP10.08□□□□□ -0.8
HLA-B-258ENST00000640615 SLC38A10Q9HBR0 1119 aa10.08□□□□□ -0.8
HLA-B-258ENST00000640615 RAVER2Q9HCJ3 691 aaKnown RBP10.08□□□□□ -0.8
HLA-B-258ENST00000640615 C6orf50Q9HD87 102 aa10.08□□□□□ -0.8
HLA-B-258ENST00000640615 MYPNQ86TC9 1320 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 PHIPQ8WWQ0 1821 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 SPDYE16A6NNV3 312 aaPredicted RBP10.07□□□□□ -0.8
HLA-B-258ENST00000640615 BTBD18B2RXH4 712 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 KIF28PB7ZC32 967 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 PDHXO00330 501 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 CA12O43570 354 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 ICAM1P05362 532 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 SLC10A3P09131 477 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 TAL1P17542 331 aaPredicted RBP10.07□□□□□ -0.8
HLA-B-258ENST00000640615 GNA11P29992 359 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 KIF23Q02241 960 aaPredicted RBP10.07□□□□□ -0.8
HLA-B-258ENST00000640615 RESTQ13127 1097 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 GRM1Q13255 1194 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 GALNT17Q6IS24 598 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 PPP1R18Q6NYC8 613 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 ANKRD23Q86SG2 305 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 BLIDQ8IZY5 108 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 FAM177A1Q8N128 213 aaPredicted RBP10.07□□□□□ -0.8
HLA-B-258ENST00000640615 OXER1Q8TDS5 423 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 AGBL1Q96MI9 1066 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 ZMYND12Q9H0C1 365 aa10.07□□□□□ -0.8
HLA-B-258ENST00000640615 FOXP1Q9H334 677 aaPredicted RBP10.07□□□□□ -0.8
HLA-B-258ENST00000640615 ZSCAN16Q9H4T2 348 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms