RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-223ENST00000640091 MAP3K9P80192 1104 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 VGLL4Q14135 290 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 PTPAQ15257 358 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 MAP1SQ66K74 1059 aaPredicted RBP11.99□□□□□ -0.49
NECAP1-223ENST00000640091 ZNF280CQ8ND82 737 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 BICD2Q8TD16 824 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 GINM1Q9NU53 330 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 TMEM260Q9NX78 707 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 MRVI1Q9Y6F6 885 aa11.99□□□□□ -0.49
NECAP1-223ENST00000640091 YEATS4O95619 227 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 LIG1P18858 919 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 BACE1P56817 501 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 TTLL12Q14166 644 aaPredicted RBP11.98□□□□□ -0.49
NECAP1-223ENST00000640091 ZNF174Q15697 407 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 JAKMIP3Q5VZ66 844 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 ZNF526Q8TF50 670 aaPredicted RBP11.98□□□□□ -0.49
NECAP1-223ENST00000640091 CNKSR2Q8WXI2 1034 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 CCDC194A0A1B0GVG4 234 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 HMGCS2P54868 508 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 INF2Q27J81 1249 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 GALNT17Q6IS24 598 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 CCDC174Q6PII3 467 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 DAGLBQ8NCG7 672 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 KCNG4Q8TDN1 519 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 CHURC1Q8WUH1 139 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 WDR18Q9BV38 432 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 AS3MTQ9HBK9 375 aa11.98□□□□□ -0.49
NECAP1-223ENST00000640091 hCG_1984214I3L0E3 225 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 TRAF5O00463 557 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 VCAM1P19320 739 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 ADCY7P51828 1080 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 UBE2SQ16763 222 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 FBXO11Q86XK2 927 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 CCAR1Q8IX12 1150 aaKnown RBP11.97□□□□□ -0.49
NECAP1-223ENST00000640091 ZNF713Q8N859 430 aaPredicted RBP11.97□□□□□ -0.49
NECAP1-223ENST00000640091 LPAR1Q92633 364 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 CLMNQ96JQ2 1002 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 CLIC6Q96NY7 704 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 AMNQ9BXJ7 453 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 TANGO6Q9C0B7 1094 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 PSTPIP2Q9H939 334 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 FEM1BQ9UK73 627 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 SNCAIPQ9Y6H5 919 aa11.97□□□□□ -0.49
NECAP1-223ENST00000640091 USP17L15C9J2P7 530 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 USP17L13C9JLJ4 530 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 USP17L11C9JVI0 530 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 USP17L18D6R9N7 530 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 USP17L22D6RA61 530 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 USP17L17D6RBQ6 530 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 USP17L19D6RCP7 530 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 USP17L20D6RJB6 530 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 MCM7P33993 719 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 NF2P35240 595 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 USP17L24Q0WX57 530 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 GSE1Q14687 1217 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 TTC38Q5R3I4 469 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 ADALQ6DHV7 355 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 USP17L6PQ6QN14 398 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 REXO1Q8N1G1 1221 aaKnown RBP11.96□□□□□ -0.49
NECAP1-223ENST00000640091 ZNF408Q9H9D4 720 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 ELP3Q9H9T3 547 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 NOL7Q9UMY1 257 aaKnown RBP11.96□□□□□ -0.49
NECAP1-223ENST00000640091 AFG3L2Q9Y4W6 797 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 CSADQ9Y600 493 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 ATAD5Q96QE3 1844 aa11.96□□□□□ -0.49
NECAP1-223ENST00000640091 A0A1B0GVL5 298 aa11.96□□□□□ -0.5
NECAP1-223ENST00000640091 ESYT2A0FGR8 921 aa11.96□□□□□ -0.5
NECAP1-223ENST00000640091 WDR46O15213 610 aaKnown RBP11.96□□□□□ -0.5
NECAP1-223ENST00000640091 NR1I2O75469 434 aa11.96□□□□□ -0.5
NECAP1-223ENST00000640091 FLOT1O75955 427 aa11.96□□□□□ -0.5
NECAP1-223ENST00000640091 IREB2P48200 963 aaKnown RBP11.96□□□□□ -0.5
NECAP1-223ENST00000640091 USP14P54578 494 aa11.96□□□□□ -0.5
NECAP1-223ENST00000640091 GRIN1Q05586 938 aa11.96□□□□□ -0.5
NECAP1-223ENST00000640091 ZSCAN23Q3MJ62 389 aa11.96□□□□□ -0.5
NECAP1-223ENST00000640091 SPECC1Q5M775 1068 aa11.96□□□□□ -0.5
NECAP1-223ENST00000640091 NOL9Q5SY16 702 aaKnown RBP11.96□□□□□ -0.5
NECAP1-223ENST00000640091 AXDND1Q5T1B0 1012 aaPredicted RBP11.96□□□□□ -0.5
NECAP1-223ENST00000640091 GOLPH3LQ9H4A5 285 aa11.96□□□□□ -0.5
NECAP1-223ENST00000640091 RPAP3Q9H6T3 665 aaPredicted RBP11.96□□□□□ -0.5
NECAP1-223ENST00000640091 RIC8AQ9NPQ8 531 aa11.96□□□□□ -0.5
NECAP1-223ENST00000640091 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.96□□□□□ -0.5
NECAP1-223ENST00000640091 DACT1Q9NYF0 836 aa11.96□□□□□ -0.5
NECAP1-223ENST00000640091 PPP6R2O75170 966 aa11.95□□□□□ -0.5
NECAP1-223ENST00000640091 MRPL12P52815 198 aaKnown RBP11.95□□□□□ -0.5
NECAP1-223ENST00000640091 FAM160B2Q86V87 743 aa11.95□□□□□ -0.5
NECAP1-223ENST00000640091 FAM177A1Q8N128 213 aaPredicted RBP11.95□□□□□ -0.5
NECAP1-223ENST00000640091 PRPF38AQ8NAV1 312 aaKnown RBP11.95□□□□□ -0.5
NECAP1-223ENST00000640091 CUL5Q93034 780 aa11.95□□□□□ -0.5
NECAP1-223ENST00000640091 NMRK2Q9NPI5 230 aa11.95□□□□□ -0.5
NECAP1-223ENST00000640091 PLA2G6O60733 806 aa11.95□□□□□ -0.5
NECAP1-223ENST00000640091 PTGDRQ13258 359 aa11.95□□□□□ -0.5
NECAP1-223ENST00000640091 NONOQ15233 471 aaKnown RBP eCLIP11.95□□□□□ -0.5
NECAP1-223ENST00000640091 CAMK4Q16566 473 aa11.95□□□□□ -0.5
NECAP1-223ENST00000640091 CPXCR1Q8N123 301 aa11.95□□□□□ -0.5
NECAP1-223ENST00000640091 FSIP1Q8NA03 581 aa11.95□□□□□ -0.5
NECAP1-223ENST00000640091 TBCKQ8TEA7 893 aa11.95□□□□□ -0.5
NECAP1-223ENST00000640091 SLF1Q9BQI6 1058 aa11.95□□□□□ -0.5
NECAP1-223ENST00000640091 RANBP17Q9H2T7 1088 aaKnown RBP11.95□□□□□ -0.5
NECAP1-223ENST00000640091 MYH15Q9Y2K3 1946 aa11.95□□□□□ -0.5
NECAP1-223ENST00000640091 SYCE3A1L190 88 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms