RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-223ENST00000640001 ARL6IP4Q66PJ3 421 aaKnown RBP8.68□□□□□ -1.02
HNRNPU-223ENST00000640001 SH3GLB2Q9NR46 395 aa8.68□□□□□ -1.02
HNRNPU-223ENST00000640001 LAMB4A4D0S4 1761 aa8.68□□□□□ -1.02
HNRNPU-223ENST00000640001 SIPA1L3O60292 1781 aaPredicted RBP8.68□□□□□ -1.02
HNRNPU-223ENST00000640001 TRIM49BA6NDI0 452 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 SOWAHDA6NJG2 315 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 STX10O60499 249 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 CYLC1P35663 651 aaPredicted RBP8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 RBM26Q5T8P6 1007 aaKnown RBP8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 SLFN13Q68D06 897 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 TMC4Q7Z404 712 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 ERMNQ8TAM6 284 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 POLLQ9UGP5 575 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 TRAF5O00463 557 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 ARID5AQ03989 594 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 ICA1Q05084 483 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 PPP2R3AQ06190 1150 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 KMT5BQ4FZB7 885 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 CCDC181Q5TID7 509 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 E4F1Q66K89 784 aaPredicted RBP8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 TMED8Q6PL24 325 aaPredicted RBP8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 NELFCDQ8IXH7 590 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 PCDHA6Q9UN73 950 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 PCDHA8Q9Y5H6 950 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 POLR3GO15318 223 aaPredicted RBP8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 SNAP25P60880 206 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 PDE4CQ08493 712 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 KRT31Q15323 416 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 HSP90B2PQ58FF3 399 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 SLC27A3Q5K4L6 730 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 CYP26C1Q6V0L0 522 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 SPICE1Q8N0Z3 855 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 IL17RBQ9NRM6 502 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 DDX25Q9UHL0 483 aaKnown RBP8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 PCDHA1Q9Y5I3 950 aa8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 N4BP2Q86UW6 1770 aaPredicted RBP8.67□□□□□ -1.02
HNRNPU-223ENST00000640001 H7C1D1 291 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 ERLIN1O75477 346 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 KIF20AO95235 890 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 NCAPH2Q6IBW4 605 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 TMTC1Q8IUR5 882 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 ZNF384Q8TF68 577 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 TMEM60Q9H2L4 133 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 JADE2Q9NQC1 790 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 LRRC4BQ9NT99 713 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 HDAC9Q9UKV0 1011 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 TCP10L2B9ZVM9 353 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 CHMP2AO43633 222 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 USO1O60763 962 aaKnown RBP8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 TBCAO75347 108 aaKnown RBP8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 CCDC122Q5T0U0 273 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 TOGARAM2Q6ZUX3 1019 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 FNBP4Q8N3X1 1017 aaPredicted RBP8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 LARGE2Q8N3Y3 721 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 CCDC42Q96M95 316 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 MAD2L2Q9UI95 211 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 RWDD2AQ9UIY3 292 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 PCDHA12Q9UN75 941 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 ROBO1Q9Y6N7 1651 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 FAM205AQ6ZU69 1335 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 GPR75-ASB3A0A0A6YYF3 556 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 CLRN2A0PK11 232 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 B4DLN1 442 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 LAD1O00515 517 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 PRCPP42785 496 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 PPP4CP60510 307 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 MCM6Q14566 821 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 HERC4Q5GLZ8 1057 aaPredicted RBP8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 AMIGO3Q86WK7 504 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 SP8Q8IXZ3 490 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 RTFDC1Q9BY42 306 aaPredicted RBP8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 LUC7LQ9NQ29 371 aaKnown RBP8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 FAM207AQ9NSI2 230 aaPredicted RBP8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 SWAP70Q9UH65 585 aa8.66□□□□□ -1.02
HNRNPU-223ENST00000640001 CRKP46108 304 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 NCBP1Q09161 790 aaKnown RBP8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 DPYDQ12882 1025 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 TRIM14Q14142 442 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 C16orf86Q6ZW13 317 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 POTEDQ86YR6 584 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 RGS22Q8NE09 1264 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 CAPZA3Q96KX2 299 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 CRAMP1Q96RY5 1269 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 STK32BQ9NY57 414 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 PKD2L1Q9P0L9 805 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 A0A087X0B3 334 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 MACROD2A1Z1Q3 448 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 POTEMA6NI47 508 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 STXBP3O00186 592 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 RHOXF2BP0C7M4 288 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 BMS1Q14692 1282 aaKnown RBP8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 LRRC41Q15345 812 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 PRR16Q569H4 304 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 GPATCH4Q5T3I0 446 aaKnown RBP8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 TTBK2Q6IQ55 1244 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 CCDC65Q8IXS2 484 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 GOLGA1Q92805 767 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 MASTLQ96GX5 879 aa8.65□□□□□ -1.02
HNRNPU-223ENST00000640001 RHOXF2Q9BQY4 288 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms