RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 ITGB4P16144 1822 aa7.82□□□□□ -1.16
ATM-229ENST00000639953 PCDH11XQ9BZA7 1347 aa7.81□□□□□ -1.16
ATM-229ENST00000639953 PCDH11YQ9BZA8 1340 aa7.81□□□□□ -1.16
ATM-229ENST00000639953 BCL9O00512 1426 aa7.81□□□□□ -1.16
ATM-229ENST00000639953 VIRMAQ69YN4 1812 aaKnown RBP7.81□□□□□ -1.16
ATM-229ENST00000639953 PNMA6FA0A0J9YX94 578 aa7.81□□□□□ -1.16
ATM-229ENST00000639953 BCAR3O75815 825 aa7.81□□□□□ -1.16
ATM-229ENST00000639953 ITGB5P18084 799 aa7.81□□□□□ -1.16
ATM-229ENST00000639953 ERICH6BQ5W0A0 696 aa7.81□□□□□ -1.16
ATM-229ENST00000639953 CFAP53Q96M91 514 aa7.81□□□□□ -1.16
ATM-229ENST00000639953 DCTN4Q9UJW0 460 aa7.81□□□□□ -1.16
ATM-229ENST00000639953 CD8BP10966 210 aa7.8□□□□□ -1.16
ATM-229ENST00000639953 CD96P40200 585 aa7.8□□□□□ -1.16
ATM-229ENST00000639953 PDE4CQ08493 712 aa7.8□□□□□ -1.16
ATM-229ENST00000639953 PLCL1Q15111 1095 aa7.8□□□□□ -1.16
ATM-229ENST00000639953 ZC3H12AQ5D1E8 599 aaKnown RBP7.8□□□□□ -1.16
ATM-229ENST00000639953 OGFOD2Q6N063 350 aa7.8□□□□□ -1.16
ATM-229ENST00000639953 GRIN3AQ8TCU5 1115 aa7.8□□□□□ -1.16
ATM-229ENST00000639953 GPBAR1Q8TDU6 330 aa7.8□□□□□ -1.16
ATM-229ENST00000639953 SYTL4Q96C24 671 aaPredicted RBP7.8□□□□□ -1.16
ATM-229ENST00000639953 SSU72Q9NP77 194 aaKnown RBP7.8□□□□□ -1.16
ATM-229ENST00000639953 SPG7Q9UQ90 795 aa7.8□□□□□ -1.16
ATM-229ENST00000639953 KDRP35968 1356 aa7.8□□□□□ -1.16
ATM-229ENST00000639953 NUP188Q5SRE5 1749 aa7.8□□□□□ -1.16
ATM-229ENST00000639953 RREB1Q92766 1687 aa7.79□□□□□ -1.16
ATM-229ENST00000639953 U2AF1L5P0DN76 240 aaPredicted RBP7.79□□□□□ -1.16
ATM-229ENST00000639953 XRCC5P13010 732 aaKnown RBP7.79□□□□□ -1.16
ATM-229ENST00000639953 PHKG2P15735 406 aa7.79□□□□□ -1.16
ATM-229ENST00000639953 NME2P22392 152 aa7.79□□□□□ -1.16
ATM-229ENST00000639953 U2AF1Q01081 240 aaKnown RBP eCLIP7.79□□□□□ -1.16
ATM-229ENST00000639953 PLEKHO1Q53GL0 409 aaPredicted RBP7.79□□□□□ -1.16
ATM-229ENST00000639953 ZNF530Q6P9A1 599 aaPredicted RBP7.79□□□□□ -1.16
ATM-229ENST00000639953 NETO1Q8TDF5 533 aa7.79□□□□□ -1.16
ATM-229ENST00000639953 ISL2Q96A47 359 aa7.79□□□□□ -1.16
ATM-229ENST00000639953 ASIC4Q96FT7 647 aa7.79□□□□□ -1.16
ATM-229ENST00000639953 CAMKK2Q96RR4 588 aa7.79□□□□□ -1.16
ATM-229ENST00000639953 SETDB2Q96T68 719 aa7.79□□□□□ -1.16
ATM-229ENST00000639953 DUSP23Q9BVJ7 150 aa7.79□□□□□ -1.16
ATM-229ENST00000639953 CBX8Q9HC52 389 aa7.79□□□□□ -1.16
ATM-229ENST00000639953 CSADQ9Y600 493 aa7.79□□□□□ -1.16
ATM-229ENST00000639953 BMP6P22004 513 aa7.78□□□□□ -1.16
ATM-229ENST00000639953 MAPK1P28482 360 aa7.78□□□□□ -1.16
ATM-229ENST00000639953 ZNF252P-AS1Q0IIN9 211 aa7.78□□□□□ -1.16
ATM-229ENST00000639953 ENOX2Q16206 610 aaKnown RBP7.78□□□□□ -1.16
ATM-229ENST00000639953 MTHFSDQ2M296 383 aaKnown RBP7.78□□□□□ -1.16
ATM-229ENST00000639953 ZNF792Q3KQV3 632 aa7.78□□□□□ -1.16
ATM-229ENST00000639953 IFNL2Q8IZJ0 200 aa7.78□□□□□ -1.16
ATM-229ENST00000639953 C3orf58Q8NDZ4 430 aa7.78□□□□□ -1.16
ATM-229ENST00000639953 RUNDC1Q96C34 613 aa7.78□□□□□ -1.16
ATM-229ENST00000639953 PHACTR3Q96KR7 559 aa7.78□□□□□ -1.16
ATM-229ENST00000639953 PLAGL2Q9UPG8 496 aa7.78□□□□□ -1.16
ATM-229ENST00000639953 GNEQ9Y223 722 aaKnown RBP7.78□□□□□ -1.16
ATM-229ENST00000639953 KDM6AO15550 1401 aaPredicted RBP7.78□□□□□ -1.16
ATM-229ENST00000639953 RGPD3A6NKT7 1758 aaPredicted RBP7.77□□□□□ -1.17
ATM-229ENST00000639953 RGPD4Q7Z3J3 1758 aa7.77□□□□□ -1.17
ATM-229ENST00000639953 SCN11AQ9UI33 1791 aa7.77□□□□□ -1.17
ATM-229ENST00000639953 TREHO43280 583 aa7.77□□□□□ -1.17
ATM-229ENST00000639953 PRKAR2BP31323 418 aa7.77□□□□□ -1.17
ATM-229ENST00000639953 AMOTQ4VCS5 1084 aa7.77□□□□□ -1.17
ATM-229ENST00000639953 PPM1JQ5JR12 505 aa7.77□□□□□ -1.17
ATM-229ENST00000639953 TPTE2Q6XPS3 522 aa7.77□□□□□ -1.17
ATM-229ENST00000639953 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.77□□□□□ -1.17
ATM-229ENST00000639953 NECAB3Q96P71 396 aaPredicted RBP7.77□□□□□ -1.17
ATM-229ENST00000639953 WWC3Q9ULE0 1092 aa7.77□□□□□ -1.17
ATM-229ENST00000639953 DLG5Q8TDM6 1919 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 LY75O60449 1722 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 PLSCR1O15162 318 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 PAGE1O75459 146 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 PAPLNO95428 1278 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 JUNBP17275 347 aaPredicted RBP7.76□□□□□ -1.17
ATM-229ENST00000639953 OXCT1P55809 520 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 C1orf141Q5JVX7 400 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 C12orf40Q86WS4 652 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 STK11IPQ8N1F8 1099 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 TOP6BLQ8N6T0 577 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 RNF214Q8ND24 703 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 PIGBQ92521 554 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 HEXIM2Q96MH2 286 aaKnown RBP7.76□□□□□ -1.17
ATM-229ENST00000639953 EMILIN2Q9BXX0 1053 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 OSBPL7Q9BZF2 842 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 SRCAPQ6ZRS2 3230 aa7.76□□□□□ -1.17
ATM-229ENST00000639953 DCDC2CA8MYV0 355 aa7.75□□□□□ -1.17
ATM-229ENST00000639953 FBXO24O75426 580 aa7.75□□□□□ -1.17
ATM-229ENST00000639953 RLBP1P12271 317 aa7.75□□□□□ -1.17
ATM-229ENST00000639953 TMPOP42166 694 aaKnown RBP7.75□□□□□ -1.17
ATM-229ENST00000639953 MAPK8P45983 427 aa7.75□□□□□ -1.17
ATM-229ENST00000639953 AOC3Q16853 763 aa7.75□□□□□ -1.17
ATM-229ENST00000639953 TXNRD1Q16881 649 aa7.75□□□□□ -1.17
ATM-229ENST00000639953 RASIP1Q5U651 963 aa7.75□□□□□ -1.17
ATM-229ENST00000639953 FAM214BQ7L5A3 538 aa7.75□□□□□ -1.17
ATM-229ENST00000639953 UBE3DQ7Z6J8 389 aa7.75□□□□□ -1.17
ATM-229ENST00000639953 TSR2Q969E8 191 aaKnown RBP7.75□□□□□ -1.17
ATM-229ENST00000639953 MISP3Q96FF7 219 aa7.75□□□□□ -1.17
ATM-229ENST00000639953 THUMPD2Q9BTF0 503 aaKnown RBP7.75□□□□□ -1.17
ATM-229ENST00000639953 CACNA2D2Q9NY47 1150 aa7.75□□□□□ -1.17
ATM-229ENST00000639953 ADAMTS6Q9UKP5 1117 aa7.75□□□□□ -1.17
ATM-229ENST00000639953 VAV3Q9UKW4 847 aa7.75□□□□□ -1.17
ATM-229ENST00000639953 PLEKHG2Q9H7P9 1386 aa7.74□□□□□ -1.17
ATM-229ENST00000639953 KRTAP4-8A0A0G2JLE6 195 aa7.74□□□□□ -1.17
ATM-229ENST00000639953 ENC1O14682 589 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms