RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	GRM8	O00222	908 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	PSMC4	P43686	418 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	SEPT2	Q15019	361 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	RPS6KA1	Q15418	735 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	KIFC2	Q96AC6	838 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	FLOT1	O75955	427 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	TAT	P17735	454 aa	Predicted RBP	12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	NLRP5	P59047	1200 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	ZNF174	Q15697	407 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	P3H4	Q92791	437 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	NACAP1	Q9BZK3	213 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	TMEM165	Q9HC07	324 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	DLGAP2	Q9P1A6	1054 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	RASAL2	Q9UJF2	1139 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	ATP8A1	Q9Y2Q0	1164 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	MROH2A	A6NES4	1674 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	FOXN1	O15353	648 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	MME	P08473	750 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	DDR1	Q08345	913 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	RRAGA	Q7L523	313 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	HOMER3	Q9NSC5	361 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	PAG1	Q9NWQ8	432 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	ZFAT	Q9P243	1243 aa		12.5	□□□□□ -0.41
SPIN3-231	ENST00000639895	STX2	P32856	288 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	ASIC1	P78348	528 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	CFAP157	Q5JU67	520 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	TMEM154	Q6P9G4	183 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	RASGRP2	Q7LDG7	609 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	UBE3B	Q7Z3V4	1068 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	ARHGAP22	Q7Z5H3	698 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	SPATA4	Q8NEY3	305 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	TSG101	Q99816	390 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	NUP58	Q9BVL2	599 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	RGL1	Q9NZL6	768 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	FBXO3	Q9UK99	471 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	NEXMIF	Q5QGS0	1516 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	CFAP73	A6NFT4	308 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	IRF6	O14896	467 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	RTN1	Q16799	776 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	MFSD4B	Q5TF39	518 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	ARMCX6	Q7L4S7	300 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	KIF2B	Q8N4N8	673 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	CEP63	Q96MT8	703 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	CHP1	Q99653	195 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	TSKS	Q9UJT2	592 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	CAMSAP1	Q5T5Y3	1602 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	HOXC9	P31274	260 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	FXR1	P51114	621 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	PPP2R2A	P63151	447 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	DHX9	Q08211	1270 aa	Known RBP	12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	ANKLE2	Q86XL3	938 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	RAB3IL1	Q8TBN0	382 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	PYM1	Q9BRP8	204 aa	Known RBP	12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	LARS	Q9P2J5	1176 aa	Known RBP	12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	INTU	Q9ULD6	942 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	SH3BP1	Q9Y3L3	701 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	ERBB3	P21860	1342 aa		12.49	□□□□□ -0.41
SPIN3-231	ENST00000639895	SLCO1A2	P46721	670 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	RASSF2	P50749	326 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	KIF23	Q02241	960 aa	Predicted RBP	12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	KLC1	Q07866	573 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	MAP7D1	Q3KQU3	841 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	C3orf20	Q8ND61	904 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	CHMP6	Q96FZ7	201 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	LBHD1	Q9BQE6	289 aa	Predicted RBP	12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	DBNDD2	Q9BQY9	259 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	TFR2	Q9UP52	801 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	ZNF711	Q9Y462	761 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	BAG2	O95816	211 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	A1BG	P04217	495 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	DEUP1	Q05D60	604 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	TFCP2	Q12800	502 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	RAPGEF1	Q13905	1077 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	NFRKB	Q6P4R8	1299 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	AIFM3	Q96NN9	605 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	PLCB1	Q9NQ66	1216 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	A1CF	Q9NQ94	594 aa	Known RBP	12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	MINDY4B	A8MYZ0	360 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	BTBD18	B2RXH4	712 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	AARS	P49588	968 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	RASSF7	Q02833	373 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	PHLDB3	Q6NSJ2	640 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	HAUS1	Q96CS2	278 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	DYDC2	Q96IM9	177 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	NLRC4	Q9NPP4	1024 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	C15orf41	Q9Y2V0	281 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	ALK	Q9UM73	1620 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	ZC3H13	Q5T200	1668 aa	Known RBP	12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	ADCY9	O60503	1353 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	KDR	P35968	1356 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	CPSF1	Q10570	1443 aa	Known RBP	12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	KRIT1	O00522	736 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	OPLAH	O14841	1288 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	C21orf2	O43822	256 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	ATP6V1G2	O95670	118 aa		12.48	□□□□□ -0.41
SPIN3-231	ENST00000639895	SH3BGR	P55822	239 aa	Predicted RBP	12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms