RNA–Protein interactions for RNA: ENST00000638716.1

HNRNPU-216, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 2,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-216ENST00000638716 MSL3Q8N5Y2 521 aaKnown RBP10.72□□□□□ -0.69
HNRNPU-216ENST00000638716 NOA1Q8NC60 698 aaKnown RBP10.72□□□□□ -0.69
HNRNPU-216ENST00000638716 PNMA1Q8ND90 353 aa10.72□□□□□ -0.69
HNRNPU-216ENST00000638716 PLIN2Q99541 437 aa10.72□□□□□ -0.69
HNRNPU-216ENST00000638716 CDCA7Q9BWT1 371 aaPredicted RBP10.72□□□□□ -0.69
HNRNPU-216ENST00000638716 CAPN11Q9UMQ6 739 aa10.72□□□□□ -0.69
HNRNPU-216ENST00000638716 PCDHA6Q9UN73 950 aa10.72□□□□□ -0.69
HNRNPU-216ENST00000638716 LUC7L2Q9Y383 392 aaKnown RBP10.72□□□□□ -0.69
HNRNPU-216ENST00000638716 PCDHA8Q9Y5H6 950 aa10.72□□□□□ -0.69
HNRNPU-216ENST00000638716 PDS5AQ29RF7 1337 aaKnown RBP10.72□□□□□ -0.69
HNRNPU-216ENST00000638716 GTF2E1P29083 439 aaPredicted RBP10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 WDR59Q6PJI9 974 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 DGKHQ86XP1 1220 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 DNAJC7Q99615 494 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 THAP9Q9H5L6 903 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 HAUS4Q9H6D7 363 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 PSD3Q9NYI0 1048 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 MAD2L2Q9UI95 211 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 NRAPQ86VF7 1730 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 RHOBTB3O94955 611 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 UBA7P41226 1012 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 RPS8P62241 208 aaKnown RBP10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 HERVK_113P62684 666 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 STIM1Q13586 685 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 INF2Q27J81 1249 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 TRAPPC11Q7Z392 1133 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 GIMAP8Q8ND71 665 aaPredicted RBP10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 ZBTB9Q96C00 473 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 TRIM47Q96LD4 638 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 CCSER1Q9C0I3 900 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 GBP3Q9H0R5 595 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 KBTBD4Q9NVX7 518 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 TFR2Q9UP52 801 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 JAG2Q9Y219 1238 aa10.71□□□□□ -0.69
HNRNPU-216ENST00000638716 SPATA31A1Q5TZJ5 1347 aa10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 PSMD14O00487 310 aa10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 ENC1O14682 589 aa10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 PSMA7O14818 248 aa10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 EIF3JO75822 258 aaKnown RBP10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 MYL1P05976 194 aa10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 DNM2P50570 870 aa10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 CASP8Q14790 479 aa10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 GRM4Q14833 912 aa10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 TSR1Q2NL82 804 aaKnown RBP10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 SLC10A5Q5PT55 438 aa10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 TTI2Q6NXR4 508 aa10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 LRRC15Q8TF66 581 aa10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 VPS18Q9P253 973 aa10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 MAGEC2Q9UBF1 373 aaPredicted RBP10.71□□□□□ -0.7
HNRNPU-216ENST00000638716 ZBTB22O15209 634 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 CYTH3O43739 400 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 N4BP1O75113 896 aaKnown RBP10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 TUBBP07437 444 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 LMAN1P49257 510 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 SLC35G1Q2M3R5 365 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 MUM1L1Q5H9M0 696 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 CCDC122Q5T0U0 273 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 C12orf60Q5U649 245 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 TBC1D9BQ66K14 1250 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 WDR93Q6P2C0 686 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 SAMD1Q6SPF0 538 aaPredicted RBP10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 DAGLBQ8NCG7 672 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 CCDC148Q8NFR7 591 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 ANKS1AQ92625 1134 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 DYNLL2Q96FJ2 89 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 HDAC6Q9UBN7 1215 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 ZNF831Q5JPB2 1677 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 USP17L3A6NCW0 530 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 USP17L4A6NCW7 530 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 B4DLN1 442 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 TULP2O00295 520 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 ATP1A1P05023 1023 aaKnown RBP10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 SRGNP10124 158 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 GNAQP50148 359 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 ZSCAN26Q16670 478 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 USP17L1Q7RTZ2 530 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 HEATR3Q7Z4Q2 680 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 TXNRD3Q86VQ6 643 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 DUSP9Q99956 384 aaKnown RBP10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 AGPAT5Q9NUQ2 364 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 EXOC1Q9NV70 894 aa10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 MKRN1Q9UHC7 482 aaKnown RBP10.7□□□□□ -0.7
HNRNPU-216ENST00000638716 RASSF10A6NK89 507 aa10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 STXBP3O00186 592 aa10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 LAD1O00515 517 aa10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 KCNQ2O43526 872 aa10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 IRX5P78411 483 aaPredicted RBP10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 SEMA3FQ13275 785 aa10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 MEA1Q16626 185 aa10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 GALNT17Q6IS24 598 aa10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 TMED8Q6PL24 325 aaPredicted RBP10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 ZNF662Q6ZS27 426 aa10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 SMIM5Q71RC9 77 aa10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 DZIP1Q86YF9 867 aaKnown RBP10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 CSGALNACT2Q8N6G5 542 aa10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 LINC00116Q8NCU8 138 aa10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 DHTKD1Q96HY7 919 aaPredicted RBP10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 TUBGCP2Q9BSJ2 902 aa10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 TTYH3Q9C0H2 523 aa10.69□□□□□ -0.7
HNRNPU-216ENST00000638716 ANKRD2Q9GZV1 360 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms