RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 FRMPD2Q68DX3 1309 aaPredicted RBP20.29■□□□□ 0.84
SCARB2-213ENST00000638680 OPHN1O60890 802 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 CTSWP56202 376 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 DNAJC10Q8IXB1 793 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 TRMT2AQ8IZ69 625 aaKnown RBP20.29■□□□□ 0.84
SCARB2-213ENST00000638680 CPXCR1Q8N123 301 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 PLXNC1O60486 1568 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 MAP7Q14244 749 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 NEK8Q86SG6 692 aa20.29■□□□□ 0.84
SCARB2-213ENST00000638680 IKBKBO14920 756 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 H2AFZP0C0S5 128 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 ADAM9Q13443 819 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 H2AFVQ71UI9 128 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 GAS7O60861 476 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 LONP1P36776 959 aaKnown RBP20.28■□□□□ 0.84
SCARB2-213ENST00000638680 TMCO4Q5TGY1 634 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 CCDC24Q8N4L8 307 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 SH2D4BQ5SQS7 431 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 PPP4R1Q8TF05 950 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 TUBGCP2Q9BSJ2 902 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 LRRC24Q50LG9 513 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 TRIM6Q9C030 488 aaPredicted RBP20.28■□□□□ 0.84
SCARB2-213ENST00000638680 BCAP29Q9UHQ4 241 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 PCDHA12Q9UN75 941 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 PRR16Q569H4 304 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 GSDMBQ8TAX9 411 aa20.28■□□□□ 0.84
SCARB2-213ENST00000638680 FTOQ9C0B1 505 aaKnown RBP eCLIP20.28■□□□□ 0.84
SCARB2-213ENST00000638680 ABCC2Q92887 1545 aa20.27■□□□□ 0.84
SCARB2-213ENST00000638680 C2orf54Q08AI8 447 aa20.27■□□□□ 0.84
SCARB2-213ENST00000638680 IL17REQ8NFR9 667 aa20.27■□□□□ 0.84
SCARB2-213ENST00000638680 NOP56O00567 594 aaKnown RBP20.27■□□□□ 0.84
SCARB2-213ENST00000638680 ATF2P15336 505 aa20.27■□□□□ 0.84
SCARB2-213ENST00000638680 SMYD4Q8IYR2 804 aaPredicted RBP20.27■□□□□ 0.84
SCARB2-213ENST00000638680 TYW1Q9NV66 732 aaKnown RBP20.27■□□□□ 0.84
SCARB2-213ENST00000638680 CCDC87Q9NVE4 849 aa20.27■□□□□ 0.84
SCARB2-213ENST00000638680 PRPF6O94906 941 aaKnown RBP20.27■□□□□ 0.84
SCARB2-213ENST00000638680 GOLGA8HP0CJ92 632 aa20.27■□□□□ 0.84
SCARB2-213ENST00000638680 NSUN7Q8NE18 718 aaKnown RBP20.27■□□□□ 0.84
SCARB2-213ENST00000638680 GINS2Q9Y248 185 aa20.27■□□□□ 0.84
SCARB2-213ENST00000638680 ATF7P17544 494 aaPredicted RBP20.27■□□□□ 0.83
SCARB2-213ENST00000638680 TCIRG1Q13488 830 aa20.27■□□□□ 0.83
SCARB2-213ENST00000638680 CUL4AQ13619 759 aa20.27■□□□□ 0.83
SCARB2-213ENST00000638680 EFCAB13Q8IY85 973 aa20.27■□□□□ 0.83
SCARB2-213ENST00000638680 PEX19P40855 299 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 CLCN6P51797 869 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 POLR3EQ9NVU0 708 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 TTLL3Q9Y4R7 772 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 EPHB4P54760 987 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 FAM102BQ5T8I3 360 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 PARD6BQ9BYG5 372 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 MAP3K21Q5TCX8 1036 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 MIER3Q7Z3K6 550 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 CCDC197Q8NCU1 140 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 PNMA1Q8ND90 353 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 GSDMAQ96QA5 445 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 OSBPL3Q9H4L5 887 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 PSTPIP2Q9H939 334 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 PICK1Q9NRD5 415 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 TLR7Q9NYK1 1049 aaKnown RBP20.26■□□□□ 0.83
SCARB2-213ENST00000638680 IFNAR2P48551 515 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 PDE6CP51160 858 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 DDX27Q96GQ7 796 aaKnown RBP20.26■□□□□ 0.83
SCARB2-213ENST00000638680 PLEKHF1Q96S99 279 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 TMOD4Q9NZQ9 345 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 DDX25Q9UHL0 483 aaKnown RBP20.26■□□□□ 0.83
SCARB2-213ENST00000638680 SOWAHDA6NJG2 315 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 IRX4P78413 519 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 NSMFQ6X4W1 530 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 CFAP61Q8NHU2 1237 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 EFCC1Q9HA90 598 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 EPB41L5Q9HCM4 733 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 PTPN22Q9Y2R2 807 aa20.26■□□□□ 0.83
SCARB2-213ENST00000638680 DDAH1O94760 285 aa20.25■□□□□ 0.83
SCARB2-213ENST00000638680 INTS9Q9NV88 658 aaKnown RBP20.25■□□□□ 0.83
SCARB2-213ENST00000638680 RPSAP08865 295 aaKnown RBP20.25■□□□□ 0.83
SCARB2-213ENST00000638680 ACRBPQ8NEB7 543 aa20.25■□□□□ 0.83
SCARB2-213ENST00000638680 RABGAP1Q9Y3P9 1069 aa20.25■□□□□ 0.83
SCARB2-213ENST00000638680 PASKQ96RG2 1323 aa20.25■□□□□ 0.83
SCARB2-213ENST00000638680 TTC36A6NLP5 189 aa20.25■□□□□ 0.83
SCARB2-213ENST00000638680 CCDC117Q8IWD4 279 aaPredicted RBP20.25■□□□□ 0.83
SCARB2-213ENST00000638680 LRRC8CQ8TDW0 803 aa20.25■□□□□ 0.83
SCARB2-213ENST00000638680 TPX2Q9ULW0 747 aaKnown RBP20.25■□□□□ 0.83
SCARB2-213ENST00000638680 SLC12A2P55011 1212 aa20.25■□□□□ 0.83
SCARB2-213ENST00000638680 ZNF589Q86UQ0 364 aaPredicted RBP20.25■□□□□ 0.83
SCARB2-213ENST00000638680 MAN1B1Q9UKM7 699 aa20.25■□□□□ 0.83
SCARB2-213ENST00000638680 HEXIM1O94992 359 aaKnown RBP20.24■□□□□ 0.83
SCARB2-213ENST00000638680 LUC7L3O95232 432 aaKnown RBP20.24■□□□□ 0.83
SCARB2-213ENST00000638680 GRAMD1CQ8IYS0 662 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 K7ENM7 598 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 KRT81Q14533 505 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 NXNQ6DKJ4 435 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 TAB3Q8N5C8 712 aaPredicted RBP20.24■□□□□ 0.83
SCARB2-213ENST00000638680 ST7Q9NRC1 585 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 BCAMP50895 628 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 FAM26FQ5R3K3 315 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 CCDC125Q86Z20 511 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 AZI2Q9H6S1 392 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 AFG3L2Q9Y4W6 797 aa20.24■□□□□ 0.83
SCARB2-213ENST00000638680 KLRF2D3W0D1 207 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms