RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	ATRN	O75882	1429 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	C21orf2	O43822	256 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	MBD4	O95243	580 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	ITIH3	Q06033	890 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	KIF5A	Q12840	1032 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	WTAP	Q15007	396 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	MEA1	Q16626	185 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	ZNF658	Q5TYW1	1059 aa	Predicted RBP	15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	MEX3C	Q5U5Q3	659 aa	Known RBP	15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	YTHDF3	Q7Z739	585 aa	Known RBP	15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	FBXO3	Q9UK99	471 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	SCN11A	Q9UI33	1791 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	PCDH11X	Q9BZA7	1347 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	PCDH11Y	Q9BZA8	1340 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	ZNF532	Q9HCE3	1301 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	MATR3	P43243	847 aa	Known RBP eCLIP	15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	NAP1L1	P55209	391 aa	Known RBP	15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	SLC7A5	Q01650	507 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	PPARA	Q07869	468 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	NNT	Q13423	1086 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	RNF187	Q5TA31	235 aa	Predicted RBP	15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	SH2D3C	Q8N5H7	860 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	ZKSCAN4	Q969J2	545 aa	Predicted RBP	15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	PURB	Q96QR8	312 aa	Known RBP	15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	CNNM2	Q9H8M5	875 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	RMND1	Q9NWS8	449 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	MAPK8IP1	Q9UQF2	711 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	XBP1	P17861	261 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	ELF1	P32519	619 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	NAA35	Q5VZE5	725 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	KCTD16	Q68DU8	428 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	CCDC170	Q8IYT3	715 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	SPATA4	Q8NEY3	305 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	TSGA10	Q9BZW7	698 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	KRT23	Q9C075	422 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	EPN3	Q9H201	632 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	DUSP10	Q9Y6W6	482 aa		15.21	■□□□□ 0.03
KCNMA1-238	ENST00000638514	NEBL	O76041	1014 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	PHKA1	P46020	1223 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	MRPS25	P82663	173 aa	Known RBP	15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	MAP3K12	Q12852	859 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	N4BP2L2	Q92802	583 aa	Predicted RBP	15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	CAVIN3	Q969G5	261 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	PAGR1	Q9BTK6	254 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	STIM2	Q9P246	746 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	SLC4A4	Q9Y6R1	1079 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	LSP1	P33241	339 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	KRT2	P35908	639 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	NAIF1	Q69YI7	327 aa	Predicted RBP	15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	KDM7A	Q6ZMT4	941 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	FAM43B	Q6ZT52	329 aa	Predicted RBP	15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	ZNF572	Q7Z3I7	529 aa	Predicted RBP	15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	TRIM58	Q8NG06	486 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	ZIM3	Q96PE6	472 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	NACAP1	Q9BZK3	213 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	TACC1	O75410	805 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	CYP7A1	P22680	504 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	BIRC2	Q13490	618 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	ZNF174	Q15697	407 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	ALX1	Q15699	326 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	DDB1	Q16531	1140 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	ZNF507	Q8TCN5	953 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	KLC4	Q9NSK0	619 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	GDA	Q9Y2T3	454 aa		15.2	■□□□□ 0.02
KCNMA1-238	ENST00000638514	MARCH6	O60337	910 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	VAV2	P52735	878 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	IRF2BP1	Q8IU81	584 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	ZNF473	Q8WTR7	871 aa	Known RBP	15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	PIGB	Q92521	554 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	VCPKMT	Q9H867	229 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	PIH1D3	Q9NQM4	214 aa	Known RBP	15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	MCM8	Q9UJA3	840 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	CAMTA1	Q9Y6Y1	1673 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	PRCP	P42785	496 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	CYP27A1	Q02318	531 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	EARS2	Q5JPH6	523 aa	Known RBP	15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	AKNAD1	Q5T1N1	836 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	CCDC181	Q5TID7	509 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	MFSD6	Q6ZSS7	791 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	BRINP3	Q76B58	766 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	RNPC3	Q96LT9	517 aa	Known RBP	15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	UIMC1	Q96RL1	719 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	STRBP	Q96SI9	672 aa	Known RBP	15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	PYM1	Q9BRP8	204 aa	Known RBP	15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	TFCP2L1	Q9NZI6	479 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	RPN1	P04843	607 aa	Known RBP	15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	PDE6A	P16499	860 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	TRIM21	P19474	475 aa	Known RBP	15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	EEF1G	P26641	437 aa	Known RBP	15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	SMTN	P53814	917 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	PDS5A	Q29RF7	1337 aa	Known RBP	15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	PREPL	Q4J6C6	727 aa	Predicted RBP	15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	FANCB	Q8NB91	859 aa		15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	MAGEC2	Q9UBF1	373 aa	Predicted RBP	15.19	■□□□□ 0.02
KCNMA1-238	ENST00000638514	TRIM49B	A6NDI0	452 aa		15.18	■□□□□ 0.02
KCNMA1-238	ENST00000638514	NF2	P35240	595 aa		15.18	■□□□□ 0.02
KCNMA1-238	ENST00000638514	BCAM	P50895	628 aa		15.18	■□□□□ 0.02
KCNMA1-238	ENST00000638514	ACTN3	Q08043	901 aa	Predicted RBP	15.18	■□□□□ 0.02
KCNMA1-238	ENST00000638514	SPA17	Q15506	151 aa		15.18	■□□□□ 0.02

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