RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 TTMPQ5BVD1 217 aa13.53□□□□□ -0.24
GFAP-228ENST00000638488 RESP18Q5W5W9 173 aa13.53□□□□□ -0.24
GFAP-228ENST00000638488 CCDC121Q6ZUS5 278 aa13.53□□□□□ -0.24
GFAP-228ENST00000638488 TBC1D10CQ8IV04 446 aa13.53□□□□□ -0.24
GFAP-228ENST00000638488 MB21D2Q8IYB1 491 aaPredicted RBP13.53□□□□□ -0.24
GFAP-228ENST00000638488 TRIML1Q8N9V2 468 aa13.53□□□□□ -0.24
GFAP-228ENST00000638488 GDAP1L1Q96MZ0 367 aa13.53□□□□□ -0.24
GFAP-228ENST00000638488 ARMT1Q9H993 441 aa13.53□□□□□ -0.24
GFAP-228ENST00000638488 KIF9Q9HAQ2 790 aa13.53□□□□□ -0.24
GFAP-228ENST00000638488 EME2A4GXA9 379 aaPredicted RBP13.52□□□□□ -0.24
GFAP-228ENST00000638488 PPP1R37O75864 691 aa13.52□□□□□ -0.24
GFAP-228ENST00000638488 MBD4O95243 580 aa13.52□□□□□ -0.24
GFAP-228ENST00000638488 FAM107AO95990 144 aa13.52□□□□□ -0.24
GFAP-228ENST00000638488 FMR1Q06787 632 aaKnown RBP eCLIP13.52□□□□□ -0.24
GFAP-228ENST00000638488 NT5DC1Q5TFE4 455 aa13.52□□□□□ -0.24
GFAP-228ENST00000638488 C3orf67Q6ZVT6 689 aa13.52□□□□□ -0.24
GFAP-228ENST00000638488 OR8K1Q8NGG5 319 aa13.52□□□□□ -0.24
GFAP-228ENST00000638488 ZNF512BQ96KM6 892 aaPredicted RBP13.52□□□□□ -0.24
GFAP-228ENST00000638488 ZMYM6O95789 1325 aa13.52□□□□□ -0.24
GFAP-228ENST00000638488 B4E1Z4 1266 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 CPLX1O14810 134 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 POLR3DP05423 398 aaPredicted RBP13.52□□□□□ -0.25
GFAP-228ENST00000638488 ERCC5P28715 1186 aaPredicted RBP13.52□□□□□ -0.25
GFAP-228ENST00000638488 MAP3K12Q12852 859 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 UBE3CQ15386 1083 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 EMBQ6PCB8 327 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 SHC4Q6S5L8 630 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 CYP26C1Q6V0L0 522 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 SND1Q7KZF4 910 aaKnown RBP eCLIP13.52□□□□□ -0.25
GFAP-228ENST00000638488 FOXP4Q8IVH2 680 aaPredicted RBP13.52□□□□□ -0.25
GFAP-228ENST00000638488 MIGA1Q8NAN2 632 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 MYCBPAPQ8TBZ2 947 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 P3H4Q92791 437 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 SPDL1Q96EA4 605 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 CTAGE1Q96RT6 745 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 GJB4Q9NTQ9 266 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 ABCF2Q9UG63 623 aa13.52□□□□□ -0.25
GFAP-228ENST00000638488 MYH7P12883 1935 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 MYH8P13535 1937 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 FRMD3A2A2Y4 597 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 HSF2BPO75031 334 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 RPS6KA3P51812 740 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 APTXQ7Z2E3 356 aaKnown RBP13.51□□□□□ -0.25
GFAP-228ENST00000638488 NLRP14Q86W24 1093 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 GSPT2Q8IYD1 628 aaKnown RBP13.51□□□□□ -0.25
GFAP-228ENST00000638488 FBXL16Q8N461 479 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 C1orf131Q8NDD1 294 aaKnown RBP13.51□□□□□ -0.25
GFAP-228ENST00000638488 LMBR1Q8WVP7 490 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 BORCS6Q96GS4 357 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 SCLT1Q96NL6 688 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 LRP2BPQ9P2M1 347 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 MAN1B1Q9UKM7 699 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 MGRN1O60291 552 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 EPHB4P54760 987 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 CTDSPL2Q05D32 466 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 IFT88Q13099 833 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 XRCC4Q13426 336 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 SLC5A9Q2M3M2 681 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 HSP90AA4PQ58FG1 418 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 CYB5R4Q7L1T6 521 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 EHBP1Q8NDI1 1231 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 CCT8L2Q96SF2 557 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 HAUS4Q9H6D7 363 aa13.51□□□□□ -0.25
GFAP-228ENST00000638488 TCRBV5S4A2TA0A5A2 114 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 SEMA3EO15041 775 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 PRKAB2O43741 272 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 GYG1P46976 350 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 MDM2Q00987 491 aaPredicted RBP13.5□□□□□ -0.25
GFAP-228ENST00000638488 ITIH3Q06033 890 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 NNTQ13423 1086 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 RRP12Q5JTH9 1297 aaKnown RBP13.5□□□□□ -0.25
GFAP-228ENST00000638488 CAVIN3Q969G5 261 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 CCDC47Q96A33 483 aaKnown RBP13.5□□□□□ -0.25
GFAP-228ENST00000638488 ARL8AQ96BM9 186 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 STRBPQ96SI9 672 aaKnown RBP13.5□□□□□ -0.25
GFAP-228ENST00000638488 NAPBQ9H115 298 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 EBF2Q9HAK2 575 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 SRP68Q9UHB9 627 aaKnown RBP13.5□□□□□ -0.25
GFAP-228ENST00000638488 ABL1P00519 1130 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 PLCD1P51178 756 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 ERVK-24P63145 666 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 KIF23Q02241 960 aaPredicted RBP13.5□□□□□ -0.25
GFAP-228ENST00000638488 MORC3Q14149 939 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 TBC1D9BQ66K14 1250 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 CRELD2Q6UXH1 353 aaPredicted RBP13.5□□□□□ -0.25
GFAP-228ENST00000638488 ZNF662Q6ZS27 426 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 MMGT1Q8N4V1 131 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 RASSF8Q8NHQ8 419 aa13.5□□□□□ -0.25
GFAP-228ENST00000638488 ADD3Q9UEY8 706 aaKnown RBP13.5□□□□□ -0.25
GFAP-228ENST00000638488 LIN7AO14910 233 aaPredicted RBP13.49□□□□□ -0.25
GFAP-228ENST00000638488 TEX33O43247 280 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 GYPCP04921 128 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 NEFHP12036 1026 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 TNFRSF8P28908 595 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 CASP14P31944 242 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 TRIM14Q14142 442 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 E2F5Q15329 346 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 LACTB2Q53H82 288 aaPredicted RBP13.49□□□□□ -0.25
GFAP-228ENST00000638488 NFXL1Q6ZNB6 911 aa13.49□□□□□ -0.25
GFAP-228ENST00000638488 SENP2Q9HC62 589 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms