RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 SDR16C5Q8N3Y7 309 aa9.21□□□□□ -0.94
SCARB2-209ENST00000638409 NCOA5Q9HCD5 579 aaKnown RBP9.21□□□□□ -0.94
SCARB2-209ENST00000638409 TFCP2L1Q9NZI6 479 aa9.21□□□□□ -0.94
SCARB2-209ENST00000638409 PRAMEF22A3QJZ6 481 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 TLL1O43897 1013 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 R3HDM1Q15032 1099 aaKnown RBP9.2□□□□□ -0.94
SCARB2-209ENST00000638409 TLR1Q15399 786 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 COBLL1Q53SF7 1204 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 LRRC69Q6ZNQ3 347 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 SMAP1Q8IYB5 467 aaPredicted RBP9.2□□□□□ -0.94
SCARB2-209ENST00000638409 C1orf127Q8N9H9 656 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 EXOC2Q96KP1 924 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 PDZRN3Q9UPQ7 1066 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 RTCBQ9Y3I0 505 aaKnown RBP9.2□□□□□ -0.94
SCARB2-209ENST00000638409 SENP3-EIF4A1A0A087X0R7 540 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 hCG_1984214I3L0E3 225 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 IL2RAP01589 272 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 IL6STP40189 918 aaPredicted RBP9.2□□□□□ -0.94
SCARB2-209ENST00000638409 CLCQ05315 142 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 SLFN5Q08AF3 891 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 STAT4Q14765 748 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 ALFQ53S48 1182 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 ZKSCAN2Q63HK3 967 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 ST13P5Q8NFI4 369 aaPredicted RBP9.2□□□□□ -0.94
SCARB2-209ENST00000638409 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
SCARB2-209ENST00000638409 MORC2Q9Y6X9 1032 aaPredicted RBP9.2□□□□□ -0.94
SCARB2-209ENST00000638409 RIMBP2O15034 1052 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 SARSP49591 514 aaKnown RBP9.19□□□□□ -0.94
SCARB2-209ENST00000638409 EIF5P55010 431 aaKnown RBP9.19□□□□□ -0.94
SCARB2-209ENST00000638409 TMPRSS15P98073 1019 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 AMIGO3Q86WK7 504 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 ZNF295-AS1Q8N0V1 137 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 CCDC89Q8N998 374 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 CENPOQ9BU64 300 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 OXCT2Q9BYC2 517 aaPredicted RBP9.19□□□□□ -0.94
SCARB2-209ENST00000638409 ELP3Q9H9T3 547 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 METRNQ9UJH8 293 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 MAP4K5Q9Y4K4 846 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 C4AP0C0L4 1744 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 TRAPPC3LQ5T215 181 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 DUSP27Q5VZP5 1158 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 COL23A1Q86Y22 540 aaPredicted RBP9.19□□□□□ -0.94
SCARB2-209ENST00000638409 CNTD1Q8N815 330 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 STRBPQ96SI9 672 aaKnown RBP9.19□□□□□ -0.94
SCARB2-209ENST00000638409 CNNM2Q9H8M5 875 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 BRMS1Q9HCU9 246 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 ZBTB1Q9Y2K1 713 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 ZBED9Q6R2W3 1325 aa9.19□□□□□ -0.94
SCARB2-209ENST00000638409 LMNB2Q03252 620 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 GRM3Q14832 879 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 YOD1Q5VVQ6 348 aaPredicted RBP9.18□□□□□ -0.94
SCARB2-209ENST00000638409 C8orf58Q8NAV2 365 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 TRMT2BQ96GJ1 504 aaKnown RBP9.18□□□□□ -0.94
SCARB2-209ENST00000638409 GPR101Q96P66 508 aaPredicted RBP9.18□□□□□ -0.94
SCARB2-209ENST00000638409 SPATA9Q9BWV2 254 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 ANTXR1Q9H6X2 564 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 DDX20Q9UHI6 824 aaKnown RBP9.18□□□□□ -0.94
SCARB2-209ENST00000638409 ZBTB21Q9ULJ3 1066 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 PCDHGB3Q9Y5G1 929 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 A0A087WZG4 1122 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 AGR2O95994 175 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 A1BGP04217 495 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 DGKGP49619 791 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 GALEQ14376 348 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 XRRA1Q6P2D8 792 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 DDX46Q7L014 1031 aaKnown RBP9.18□□□□□ -0.94
SCARB2-209ENST00000638409 CLASRPQ8N2M8 674 aaKnown RBP9.18□□□□□ -0.94
SCARB2-209ENST00000638409 ZBTB38Q8NAP3 1195 aaPredicted RBP9.18□□□□□ -0.94
SCARB2-209ENST00000638409 EVLQ9UI08 416 aaPredicted RBP9.18□□□□□ -0.94
SCARB2-209ENST00000638409 LUC7L2Q9Y383 392 aaKnown RBP9.18□□□□□ -0.94
SCARB2-209ENST00000638409 UPK3BL1B0FP48 263 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 UPK3BL2E5RIL1 263 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 PAGE1O75459 146 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 HTR3AP46098 478 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 KRT24Q2M2I5 525 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 NBPF10Q6P3W6 841 aaKnown RBP9.18□□□□□ -0.94
SCARB2-209ENST00000638409 GALNT12Q8IXK2 581 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 TRMT44Q8IYL2 757 aaKnown RBP9.18□□□□□ -0.94
SCARB2-209ENST00000638409 NBPF15Q8N660 670 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 SLC7A3Q8WY07 619 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 FBRSQ9HAH7 460 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 ZSWIM6Q9HCJ5 1215 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 PLCB1Q9NQ66 1216 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 SAGE1Q9NXZ1 904 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 ZNRF3Q9ULT6 936 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 GTF2A1LQ9UNN4 478 aa9.18□□□□□ -0.94
SCARB2-209ENST00000638409 COL15A1P39059 1388 aa9.17□□□□□ -0.94
SCARB2-209ENST00000638409 GPR39O43194 453 aa9.17□□□□□ -0.94
SCARB2-209ENST00000638409 HIRAP54198 1017 aaPredicted RBP9.17□□□□□ -0.94
SCARB2-209ENST00000638409 PCBP1Q15365 356 aaKnown RBP eCLIP9.17□□□□□ -0.94
SCARB2-209ENST00000638409 ABCB5Q2M3G0 1257 aa9.17□□□□□ -0.94
SCARB2-209ENST00000638409 C1QTNF12Q5T7M4 302 aa9.17□□□□□ -0.94
SCARB2-209ENST00000638409 PKN3Q6P5Z2 889 aa9.17□□□□□ -0.94
SCARB2-209ENST00000638409 VASH1Q7L8A9 365 aaPredicted RBP9.17□□□□□ -0.94
SCARB2-209ENST00000638409 JARID2Q92833 1246 aaPredicted RBP9.17□□□□□ -0.94
SCARB2-209ENST00000638409 SCLT1Q96NL6 688 aa9.17□□□□□ -0.94
SCARB2-209ENST00000638409 EHD4Q9H223 541 aa9.17□□□□□ -0.94
SCARB2-209ENST00000638409 PCDHB5Q9Y5E4 795 aa9.17□□□□□ -0.94
SCARB2-209ENST00000638409 ID4P47928 161 aa9.17□□□□□ -0.94
SCARB2-209ENST00000638409 CHAF1AQ13111 956 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms