RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 B4E1Z4 1266 aa14.72□□□□□ -0.05
GFAP-227ENST00000638400 SGSM2O43147 1006 aa14.72□□□□□ -0.05
GFAP-227ENST00000638400 EIF5BO60841 1220 aaKnown RBP14.72□□□□□ -0.05
GFAP-227ENST00000638400 PDHBP11177 359 aa14.72□□□□□ -0.05
GFAP-227ENST00000638400 MNX1P50219 401 aaPredicted RBP14.72□□□□□ -0.05
GFAP-227ENST00000638400 TKFCQ3LXA3 575 aa14.72□□□□□ -0.05
GFAP-227ENST00000638400 ANKRD35Q8N283 1001 aa14.72□□□□□ -0.05
GFAP-227ENST00000638400 ZKSCAN3Q9BRR0 538 aa14.72□□□□□ -0.05
GFAP-227ENST00000638400 TINF2Q9BSI4 451 aa14.72□□□□□ -0.05
GFAP-227ENST00000638400 RNF39Q9H2S5 420 aa14.72□□□□□ -0.05
GFAP-227ENST00000638400 C11orf49Q9H6J7 331 aa14.72□□□□□ -0.05
GFAP-227ENST00000638400 ACAD9Q9H845 621 aa14.72□□□□□ -0.05
GFAP-227ENST00000638400 HOMER2Q9NSB8 354 aa14.72□□□□□ -0.05
GFAP-227ENST00000638400 NR2E3Q9Y5X4 410 aa14.72□□□□□ -0.05
GFAP-227ENST00000638400 U3KPZ7 1027 aaPredicted RBP14.72□□□□□ -0.05
GFAP-227ENST00000638400 MYH4Q9Y623 1939 aa14.72□□□□□ -0.05
GFAP-227ENST00000638400 ZNF536O15090 1300 aa14.71□□□□□ -0.05
GFAP-227ENST00000638400 FRMPD2Q68DX3 1309 aaPredicted RBP14.71□□□□□ -0.05
GFAP-227ENST00000638400 DNAJC25-GNG10A0A024R161 153 aa14.71□□□□□ -0.05
GFAP-227ENST00000638400 H0YGN5 161 aa14.71□□□□□ -0.05
GFAP-227ENST00000638400 SEPT4O43236 478 aa14.71□□□□□ -0.05
GFAP-227ENST00000638400 SNHG28P0DPA3 235 aa14.71□□□□□ -0.05
GFAP-227ENST00000638400 ZNF543Q08ER8 600 aa14.71□□□□□ -0.05
GFAP-227ENST00000638400 SYDE2Q5VT97 1194 aa14.71□□□□□ -0.05
GFAP-227ENST00000638400 CCDC174Q6PII3 467 aa14.71□□□□□ -0.05
GFAP-227ENST00000638400 BTNL9Q6UXG8 535 aa14.71□□□□□ -0.05
GFAP-227ENST00000638400 MSL3Q8N5Y2 521 aaKnown RBP14.71□□□□□ -0.05
GFAP-227ENST00000638400 AGBL1Q96MI9 1066 aa14.71□□□□□ -0.05
GFAP-227ENST00000638400 ZSCAN10Q96SZ4 725 aaPredicted RBP14.71□□□□□ -0.05
GFAP-227ENST00000638400 GPCPD1Q9NPB8 672 aa14.71□□□□□ -0.05
GFAP-227ENST00000638400 RNF146Q9NTX7 359 aa14.71□□□□□ -0.05
GFAP-227ENST00000638400 LAMA4Q16363 1823 aa14.71□□□□□ -0.06
GFAP-227ENST00000638400 EVI5O60447 810 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 ICAM1P05362 532 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 SLC16A2P36021 539 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 SNAP25P60880 206 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 PTH1RQ03431 593 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 TTBK2Q6IQ55 1244 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 ZNF467Q7Z7K2 595 aaPredicted RBP14.7□□□□□ -0.06
GFAP-227ENST00000638400 ENAHQ8N8S7 591 aaPredicted RBP14.7□□□□□ -0.06
GFAP-227ENST00000638400 PNMA1Q8ND90 353 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 ANKS1AQ92625 1134 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 UBAC1Q9BSL1 405 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 RANBP17Q9H2T7 1088 aaKnown RBP14.7□□□□□ -0.06
GFAP-227ENST00000638400 KAT14Q9H8E8 782 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 ZSWIM5Q9P217 1185 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 CCPG1Q9ULG6 757 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 CNPY2Q9Y2B0 182 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 CEP290O15078 2479 aa14.7□□□□□ -0.06
GFAP-227ENST00000638400 TNKSO95271 1327 aa14.69□□□□□ -0.06
GFAP-227ENST00000638400 SYNGAP1Q96PV0 1343 aa14.69□□□□□ -0.06
GFAP-227ENST00000638400 SLC34A2O95436 690 aa14.69□□□□□ -0.06
GFAP-227ENST00000638400 COL6A1P12109 1028 aa14.69□□□□□ -0.06
GFAP-227ENST00000638400 ALAS1P13196 640 aa14.69□□□□□ -0.06
GFAP-227ENST00000638400 TRDNQ13061 729 aa14.69□□□□□ -0.06
GFAP-227ENST00000638400 NFKBIBQ15653 356 aa14.69□□□□□ -0.06
GFAP-227ENST00000638400 BMP2KLQ5H9B9 411 aa14.69□□□□□ -0.06
GFAP-227ENST00000638400 PRAMEF19Q5SWL8 479 aa14.69□□□□□ -0.06
GFAP-227ENST00000638400 GPATCH4Q5T3I0 446 aaKnown RBP14.69□□□□□ -0.06
GFAP-227ENST00000638400 TRERF1Q96PN7 1200 aa14.69□□□□□ -0.06
GFAP-227ENST00000638400 COL11A1P12107 1806 aaPredicted RBP14.69□□□□□ -0.06
GFAP-227ENST00000638400 PFASO15067 1338 aa14.68□□□□□ -0.06
GFAP-227ENST00000638400 POTEB2H3BUK9 544 aa14.68□□□□□ -0.06
GFAP-227ENST00000638400 DNM1LO00429 736 aa14.68□□□□□ -0.06
GFAP-227ENST00000638400 CYP21A2P08686 494 aa14.68□□□□□ -0.06
GFAP-227ENST00000638400 MAMDC4Q6UXC1 1216 aa14.68□□□□□ -0.06
GFAP-227ENST00000638400 ARRDC4Q8NCT1 418 aa14.68□□□□□ -0.06
GFAP-227ENST00000638400 A1CFQ9NQ94 594 aaKnown RBP14.68□□□□□ -0.06
GFAP-227ENST00000638400 PNMA2Q9UL42 364 aa14.68□□□□□ -0.06
GFAP-227ENST00000638400 GOLGA8HP0CJ92 632 aa14.67□□□□□ -0.06
GFAP-227ENST00000638400 RARBP10826 455 aa14.67□□□□□ -0.06
GFAP-227ENST00000638400 IFIT1BQ5T764 474 aaKnown RBP14.67□□□□□ -0.06
GFAP-227ENST00000638400 ANO1Q5XXA6 986 aa14.67□□□□□ -0.06
GFAP-227ENST00000638400 KIAA1211Q6ZU35 1233 aa14.67□□□□□ -0.06
GFAP-227ENST00000638400 RALYLQ86SE5 291 aaKnown RBP14.67□□□□□ -0.06
GFAP-227ENST00000638400 MAP4K1Q92918 833 aa14.67□□□□□ -0.06
GFAP-227ENST00000638400 FGD4Q96M96 766 aa14.67□□□□□ -0.06
GFAP-227ENST00000638400 KBTBD13C9JR72 458 aa14.66□□□□□ -0.06
GFAP-227ENST00000638400 ZNF865P0CJ78 1059 aaPredicted RBP14.66□□□□□ -0.06
GFAP-227ENST00000638400 AKR1A1P14550 325 aa14.66□□□□□ -0.06
GFAP-227ENST00000638400 TAL1P17542 331 aaPredicted RBP14.66□□□□□ -0.06
GFAP-227ENST00000638400 ASPRV1Q53RT3 343 aa14.66□□□□□ -0.06
GFAP-227ENST00000638400 MUM1L1Q5H9M0 696 aa14.66□□□□□ -0.06
GFAP-227ENST00000638400 CYB5R4Q7L1T6 521 aa14.66□□□□□ -0.06
GFAP-227ENST00000638400 C7orf61Q8IZ16 206 aa14.66□□□□□ -0.06
GFAP-227ENST00000638400 FAM133AQ8N9E0 248 aa14.66□□□□□ -0.06
GFAP-227ENST00000638400 ESYT1Q9BSJ8 1104 aa14.66□□□□□ -0.06
GFAP-227ENST00000638400 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.66□□□□□ -0.06
GFAP-227ENST00000638400 ZHX1Q9UKY1 873 aaPredicted RBP14.66□□□□□ -0.06
GFAP-227ENST00000638400 RBM8AQ9Y5S9 174 aaKnown RBP14.66□□□□□ -0.06
GFAP-227ENST00000638400 WDR19Q8NEZ3 1342 aa14.66□□□□□ -0.06
GFAP-227ENST00000638400 E7EWF7 191 aa14.65□□□□□ -0.06
GFAP-227ENST00000638400 SNAI1O95863 264 aaPredicted RBP14.65□□□□□ -0.06
GFAP-227ENST00000638400 CNTN2Q02246 1040 aa14.65□□□□□ -0.06
GFAP-227ENST00000638400 SEC23AQ15436 765 aa14.65□□□□□ -0.06
GFAP-227ENST00000638400 GJC2Q5T442 439 aaPredicted RBP14.65□□□□□ -0.06
GFAP-227ENST00000638400 NSMFQ6X4W1 530 aa14.65□□□□□ -0.06
GFAP-227ENST00000638400 ARMCX2Q7L311 632 aa14.65□□□□□ -0.06
GFAP-227ENST00000638400 NCOA7Q8NI08 942 aa14.65□□□□□ -0.06
GFAP-227ENST00000638400 ABHD16BQ9H3Z7 469 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms