RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 REV1Q9UBZ9 1251 aa2.94□□□□□ -1.94
SCN1A-215ENST00000637285 ST6GALNAC2Q9UJ37 374 aa2.94□□□□□ -1.94
SCN1A-215ENST00000637285 A0A1W2PQJ5 194 aa2.93□□□□□ -1.94
SCN1A-215ENST00000637285 FZD7O75084 574 aa2.93□□□□□ -1.94
SCN1A-215ENST00000637285 PLATP00750 562 aa2.93□□□□□ -1.94
SCN1A-215ENST00000637285 TGM1P22735 817 aa2.93□□□□□ -1.94
SCN1A-215ENST00000637285 EIF4BP23588 611 aaKnown RBP2.93□□□□□ -1.94
SCN1A-215ENST00000637285 SARSP49591 514 aaKnown RBP2.93□□□□□ -1.94
SCN1A-215ENST00000637285 RNF4P78317 190 aa2.93□□□□□ -1.94
SCN1A-215ENST00000637285 HTRA3P83110 453 aa2.93□□□□□ -1.94
SCN1A-215ENST00000637285 MVKQ03426 396 aa2.93□□□□□ -1.94
SCN1A-215ENST00000637285 DLX2Q07687 328 aaPredicted RBP2.93□□□□□ -1.94
SCN1A-215ENST00000637285 NBPF9Q3BBW0 867 aa2.93□□□□□ -1.94
SCN1A-215ENST00000637285 TBC1D10BQ4KMP7 808 aaPredicted RBP2.93□□□□□ -1.94
SCN1A-215ENST00000637285 CRIP3Q6Q6R5 217 aa2.93□□□□□ -1.94
SCN1A-215ENST00000637285 BNC2Q6ZN30 1099 aaPredicted RBP2.93□□□□□ -1.94
SCN1A-215ENST00000637285 VPS11Q9H270 941 aa2.93□□□□□ -1.94
SCN1A-215ENST00000637285 DBR1Q9UK59 544 aaKnown RBP2.93□□□□□ -1.94
SCN1A-215ENST00000637285 HS3ST3A1Q9Y663 406 aa2.93□□□□□ -1.94
SCN1A-215ENST00000637285 ZNF536O15090 1300 aa2.93□□□□□ -1.94
SCN1A-215ENST00000637285 DNAJA2O60884 412 aa2.92□□□□□ -1.94
SCN1A-215ENST00000637285 HTR3BO95264 441 aa2.92□□□□□ -1.94
SCN1A-215ENST00000637285 AMHP03971 560 aa2.92□□□□□ -1.94
SCN1A-215ENST00000637285 CYBBP04839 570 aa2.92□□□□□ -1.94
SCN1A-215ENST00000637285 PRR5P85299 388 aa2.92□□□□□ -1.94
SCN1A-215ENST00000637285 FMR1Q06787 632 aaKnown RBP eCLIP2.92□□□□□ -1.94
SCN1A-215ENST00000637285 BICRALQ6AI39 1079 aa2.92□□□□□ -1.94
SCN1A-215ENST00000637285 PAQR3Q6TCH7 311 aa2.92□□□□□ -1.94
SCN1A-215ENST00000637285 ZNF761Q86XN6 746 aaPredicted RBP2.92□□□□□ -1.94
SCN1A-215ENST00000637285 ZNF747Q9BV97 191 aa2.92□□□□□ -1.94
SCN1A-215ENST00000637285 CHST7Q9NS84 486 aa2.92□□□□□ -1.94
SCN1A-215ENST00000637285 AP5S1Q9NUS5 200 aa2.92□□□□□ -1.94
SCN1A-215ENST00000637285 NTMQ9P121 344 aa2.92□□□□□ -1.94
SCN1A-215ENST00000637285 F6X3S4 739 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 F8W031 263 aaPredicted RBP2.91□□□□□ -1.94
SCN1A-215ENST00000637285 RGS13O14921 159 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 SIGLEC6O43699 453 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 UBOX5O94941 541 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 ASGR2P07307 311 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 DBHP09172 617 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 NCAM1P13591 858 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 ENDOUP21128 410 aaKnown RBP2.91□□□□□ -1.94
SCN1A-215ENST00000637285 CEBPAP49715 358 aaPredicted RBP2.91□□□□□ -1.94
SCN1A-215ENST00000637285 KLF10Q13118 480 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 NBPF12Q5TAG4 269 aaPredicted RBP2.91□□□□□ -1.94
SCN1A-215ENST00000637285 GLB1LQ6UWU2 654 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 LIMS2Q7Z4I7 341 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 JAMLQ86YT9 394 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 AEBP1Q8IUX7 1158 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 ZSCAN29Q8IWY8 852 aaPredicted RBP2.91□□□□□ -1.94
SCN1A-215ENST00000637285 NAT16Q8N8M0 369 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 TMEM52Q8NDY8 209 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 ALG3Q92685 438 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 RNF38Q9H0F5 515 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 PCED1AQ9H1Q7 454 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 BCAS3Q9H6U6 928 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 ANTXR1Q9H6X2 564 aa2.91□□□□□ -1.94
SCN1A-215ENST00000637285 ING1Q9UK53 422 aaPredicted RBP2.91□□□□□ -1.94
SCN1A-215ENST00000637285 ZNF205O95201 554 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 F13A1P00488 732 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 RAG1P15918 1043 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 TACR1P25103 407 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 CDSNQ15517 529 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 ARSHQ5FYA8 562 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 MEI1Q5TIA1 1274 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 TTLL7Q6ZT98 887 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 B3GNT8Q7Z7M8 397 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 USP48Q86UV5 1035 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 PHC3Q8NDX5 983 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 ADAMTS17Q8TE56 1095 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 ZNF512BQ96KM6 892 aaPredicted RBP2.9□□□□□ -1.95
SCN1A-215ENST00000637285 FRMD6Q96NE9 622 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 NOX5Q96PH1 765 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 SPATA6Q9NWH7 488 aaPredicted RBP2.9□□□□□ -1.95
SCN1A-215ENST00000637285 GFOD1Q9NXC2 390 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 INVSQ9Y283 1065 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 POLR3KQ9Y2Y1 108 aaPredicted RBP2.9□□□□□ -1.95
SCN1A-215ENST00000637285 TSC22D4Q9Y3Q8 395 aa2.9□□□□□ -1.95
SCN1A-215ENST00000637285 FAM221AA4D161 298 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 SRGAP3O43295 1099 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 LDHBP07195 334 aaKnown RBP2.89□□□□□ -1.95
SCN1A-215ENST00000637285 GSTM1P09488 218 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 RLBP1P12271 317 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 VAV1P15498 845 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 GNA15P30679 374 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 BMP8BP34820 402 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 SMAD4Q13485 552 aaKnown RBP2.89□□□□□ -1.95
SCN1A-215ENST00000637285 RGL3Q3MIN7 710 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 HLA-DQA1Q5Y7H0 255 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 CRTC3Q6UUV7 619 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 CCDC84Q86UT8 332 aaPredicted RBP2.89□□□□□ -1.95
SCN1A-215ENST00000637285 PALM2Q8IXS6 379 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 LGI4Q8N135 537 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 SMARCC2Q8TAQ2 1214 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 ZBTB8AQ96BR9 441 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.89□□□□□ -1.95
SCN1A-215ENST00000637285 RXFP1Q9HBX9 757 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 C11orf21Q9P2W6 132 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 FBXL21Q9UKT6 434 aa2.89□□□□□ -1.95
SCN1A-215ENST00000637285 PRR36Q9H6K5 1346 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms