RNA–Protein interactions for RNA: ENST00000637189.1

CHRNA7-225, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 6,181 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-225ENST00000637189 HNRNPCP07910 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 GJC2Q5T442 439 aaPredicted RBP13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 NBPF14Q5TI25 921 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 ZNF654Q8IZM8 581 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 RSAD2Q8WXG1 361 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 SH3GL3Q99963 347 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 THEGQ9P2T0 379 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 G3BP2Q9UN86 482 aaKnown RBP13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 PPP1R12AO14974 1030 aaPredicted RBP13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 DKC1O60832 514 aaKnown RBP eCLIP13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 ATXN8OSP0DMR3 200 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 GFAPP14136 432 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 AZI2Q9H6S1 392 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 KCNJ18B7U540 433 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 ZFXP17010 805 aaPredicted RBP13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 KCNJ12Q14500 433 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 CDAN1Q8IWY9 1227 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 SCYL1Q96KG9 808 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 RMDN2Q96LZ7 410 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 SAR1BQ9Y6B6 198 aa13.82□□□□□ -0.2
CHRNA7-225ENST00000637189 CTTNBP2Q8WZ74 1663 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 SORBS3O60504 671 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 PPP4R1Q8TF05 950 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 FRMPD2Q68DX3 1309 aaPredicted RBP13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 ADALQ6DHV7 355 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 SCYL2Q6P3W7 929 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 TRPA1O75762 1119 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 ADCY8P40145 1251 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 ARMCX6Q7L4S7 300 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 LARGE2Q8N3Y3 721 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 GABPB2Q8TAK5 448 aaPredicted RBP13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 ABCC10Q5T3U5 1492 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 TECP42680 631 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 CYP2J2P51589 502 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 GRAMD4Q6IC98 578 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 CACYBPQ9HB71 228 aaKnown RBP13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 TSKSQ9UJT2 592 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 SPDYE16A6NNV3 312 aaPredicted RBP13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 KRIT1O00522 736 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 DNAJC8O75937 253 aaPredicted RBP13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 TNNI1P19237 187 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 CASP2P42575 452 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 ADCY1Q08828 1119 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 SPDYE2Q495Y8 402 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 NBPF10Q6P3W6 841 aaKnown RBP13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 PALD1Q9ULE6 856 aa13.81□□□□□ -0.2
CHRNA7-225ENST00000637189 BICRAQ9NZM4 1560 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 MORC3Q14149 939 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 JADE1Q6IE81 842 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 CCDC84Q86UT8 332 aaPredicted RBP13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 NSMCE1Q8WV22 266 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 GPHNQ9NQX3 736 aaPredicted RBP13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 KIAA1468Q9P260 1216 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 AMFRQ9UKV5 643 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 TPCN1Q9ULQ1 816 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 GOLGA8KD6RF30 607 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 KCNQ3O43525 872 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 KIF22Q14807 665 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 GNPTABQ3T906 1256 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 KCTD16Q68DU8 428 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 GPBP1Q86WP2 473 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 USP28Q96RU2 1077 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 BZW2Q9Y6E2 419 aaKnown RBP13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 MYO1CO00159 1063 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 FAM98CQ17RN3 349 aaKnown RBP13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 ZSCAN10Q96SZ4 725 aaPredicted RBP13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 RAB17Q9H0T7 212 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 USP17L12C9JPN9 530 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 USP17L21D6R901 530 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 CCDC93Q567U6 631 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 SDR42E1Q8WUS8 393 aa13.8□□□□□ -0.2
CHRNA7-225ENST00000637189 PRPF6O94906 941 aaKnown RBP13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 GUCY2CP25092 1073 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 CTSWP56202 376 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 IRX4P78413 519 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 BRD3Q15059 726 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 MMS22LQ6ZRQ5 1243 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 CROCCP2Q86T23 111 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 NOSTRINQ8IVI9 506 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 ARPP21Q9UBL0 812 aaPredicted RBP13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 GSTA1P08263 222 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 GSTA2P09210 222 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 NAA35Q5VZE5 725 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 C4orf50Q6ZRC1 276 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 TM6SF1Q9BZW5 370 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 H0YIN7 160 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 IVNS1ABPQ9Y6Y0 642 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 ATF7P17544 494 aaPredicted RBP13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 HVCN1Q96D96 273 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 CDCA7Q9BWT1 371 aaPredicted RBP13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 USP40Q9NVE5 1235 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 MKL2Q9ULH7 1088 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 LMTK3Q96Q04 1460 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 ZBBXA8MT70 800 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 ZNF500O60304 480 aaPredicted RBP13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 LONP1P36776 959 aaKnown RBP13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 PKP1Q13835 747 aa13.79□□□□□ -0.2
CHRNA7-225ENST00000637189 FAM102BQ5T8I3 360 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms