RNA–Protein interactions for RNA: ENST00000637117.1

CACNA1A-236, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,124 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-236ENST00000637117 TRIM27P14373 513 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 FOSL2P15408 326 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 ERCC3P19447 782 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 SHMT1P34896 483 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 PLCD1P51178 756 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 ATP8B2P98198 1209 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 SEPT2Q15019 361 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 SNX17Q15036 470 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 LRRC41Q15345 812 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 C1orf53Q5VUE5 145 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 BLOC1S3Q6QNY0 202 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 MAGEB6Q8N7X4 407 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 SPATC1LQ9H0A9 340 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 CCDC8Q9H0W5 538 aaPredicted RBP11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 PDLIM7Q9NR12 457 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 SLC5A4Q9NY91 659 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 TNNQ9UQP3 1299 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 MYH1P12882 1939 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 RLFQ13129 1914 aa11.15□□□□□ -0.62
CACNA1A-236ENST00000637117 MYO5AQ9Y4I1 1855 aaKnown RBP11.15□□□□□ -0.63
CACNA1A-236ENST00000637117 A0A1W2PRG0 241 aa11.14□□□□□ -0.63
CACNA1A-236ENST00000637117 BCAR3O75815 825 aa11.14□□□□□ -0.63
CACNA1A-236ENST00000637117 POLR3DP05423 398 aaPredicted RBP11.14□□□□□ -0.63
CACNA1A-236ENST00000637117 TLE2Q04725 743 aa11.14□□□□□ -0.63
CACNA1A-236ENST00000637117 SHCBP1Q8NEM2 672 aa11.14□□□□□ -0.63
CACNA1A-236ENST00000637117 SSH3Q8TE77 659 aa11.14□□□□□ -0.63
CACNA1A-236ENST00000637117 FRAT1Q92837 279 aaPredicted RBP11.14□□□□□ -0.63
CACNA1A-236ENST00000637117 DBNLQ9UJU6 430 aaKnown RBP11.14□□□□□ -0.63
CACNA1A-236ENST00000637117 TACC3Q9Y6A5 838 aa11.14□□□□□ -0.63
CACNA1A-236ENST00000637117 LTBP2Q14767 1821 aa11.14□□□□□ -0.63
CACNA1A-236ENST00000637117 SOWAHBA6NEL2 793 aa11.13□□□□□ -0.63
CACNA1A-236ENST00000637117 MPHOSPH10O00566 681 aaKnown RBP11.13□□□□□ -0.63
CACNA1A-236ENST00000637117 ITGB8P26012 769 aa11.13□□□□□ -0.63
CACNA1A-236ENST00000637117 GABPAQ06546 454 aa11.13□□□□□ -0.63
CACNA1A-236ENST00000637117 MAP3K12Q12852 859 aa11.13□□□□□ -0.63
CACNA1A-236ENST00000637117 PLS1Q14651 629 aa11.13□□□□□ -0.63
CACNA1A-236ENST00000637117 NCAPG2Q86XI2 1143 aa11.13□□□□□ -0.63
CACNA1A-236ENST00000637117 ABRAQ8N0Z2 381 aa11.13□□□□□ -0.63
CACNA1A-236ENST00000637117 MB21D1Q8N884 522 aa11.13□□□□□ -0.63
CACNA1A-236ENST00000637117 TRAIPQ9BWF2 469 aa11.13□□□□□ -0.63
CACNA1A-236ENST00000637117 TANGO6Q9C0B7 1094 aa11.13□□□□□ -0.63
CACNA1A-236ENST00000637117 MROH8Q9H579 483 aa11.13□□□□□ -0.63
CACNA1A-236ENST00000637117 ANTXR1Q9H6X2 564 aa11.13□□□□□ -0.63
CACNA1A-236ENST00000637117 TMEM265A0A087WTH1 108 aa11.12□□□□□ -0.63
CACNA1A-236ENST00000637117 FAM47AQ5JRC9 791 aa11.12□□□□□ -0.63
CACNA1A-236ENST00000637117 TMED8Q6PL24 325 aaPredicted RBP11.12□□□□□ -0.63
CACNA1A-236ENST00000637117 PNMA1Q8ND90 353 aa11.12□□□□□ -0.63
CACNA1A-236ENST00000637117 EAF2Q96CJ1 260 aaPredicted RBP11.12□□□□□ -0.63
CACNA1A-236ENST00000637117 MAML3Q96JK9 1138 aa11.12□□□□□ -0.63
CACNA1A-236ENST00000637117 RNPC3Q96LT9 517 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-236ENST00000637117 USB1Q9BQ65 265 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-236ENST00000637117 TLR7Q9NYK1 1049 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-236ENST00000637117 PHF24Q9UPV7 400 aa11.12□□□□□ -0.63
CACNA1A-236ENST00000637117 NOP58Q9Y2X3 529 aaKnown RBP11.12□□□□□ -0.63
CACNA1A-236ENST00000637117 SMCHD1A6NHR9 2005 aa11.12□□□□□ -0.63
CACNA1A-236ENST00000637117 EYSQ5T1H1 3165 aa11.12□□□□□ -0.63
CACNA1A-236ENST00000637117 MAGEB6P1A0A0J9YX57 407 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 KIAA0355O15063 1070 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 FLOT1O75955 427 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 CLTBP09497 229 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 RARBP10826 455 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 FCER1AP12319 257 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 RAG1P15918 1043 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 EPHB4P54760 987 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 GRIN2CQ14957 1233 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 KIAA1755Q5JYT7 1200 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 LYPD8Q6UX82 237 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 RNF180Q86T96 592 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 TMEM57Q8N5G2 664 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 RIOK1Q9BRS2 568 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 ALG2Q9H553 416 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 XPNPEP3Q9NQH7 507 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 MCM9Q9NXL9 1143 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 TSR3Q9UJK0 312 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 PCDHB3Q9Y5E6 796 aa11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 SPTBN5Q9NRC6 3674 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-236ENST00000637117 PGK1P00558 417 aa11.1□□□□□ -0.63
CACNA1A-236ENST00000637117 SOX11P35716 441 aa11.1□□□□□ -0.63
CACNA1A-236ENST00000637117 FPGSQ05932 587 aa11.1□□□□□ -0.63
CACNA1A-236ENST00000637117 BRICD5Q6PL45 260 aa11.1□□□□□ -0.63
CACNA1A-236ENST00000637117 TMEM179Q6ZVK1 233 aa11.1□□□□□ -0.63
CACNA1A-236ENST00000637117 SIAH1Q8IUQ4 282 aa11.1□□□□□ -0.63
CACNA1A-236ENST00000637117 PBXIP1Q96AQ6 731 aa11.1□□□□□ -0.63
CACNA1A-236ENST00000637117 ATG4CQ96DT6 458 aa11.1□□□□□ -0.63
CACNA1A-236ENST00000637117 TMEM39AQ9NV64 488 aa11.1□□□□□ -0.63
CACNA1A-236ENST00000637117 NRBP1Q9UHY1 535 aa11.1□□□□□ -0.63
CACNA1A-236ENST00000637117 PRUNE2Q8WUY3 3088 aa11.1□□□□□ -0.63
CACNA1A-236ENST00000637117 CDH23Q9H251 3354 aa11.1□□□□□ -0.63
CACNA1A-236ENST00000637117 ZNFX1Q9P2E3 1918 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-236ENST00000637117 PQBP1O60828 265 aaKnown RBP11.09□□□□□ -0.63
CACNA1A-236ENST00000637117 NR1I2O75469 434 aa11.09□□□□□ -0.63
CACNA1A-236ENST00000637117 SLC25A27O95847 323 aa11.09□□□□□ -0.63
CACNA1A-236ENST00000637117 TMEM132BQ14DG7 1078 aa11.09□□□□□ -0.63
CACNA1A-236ENST00000637117 TJAP1Q5JTD0 557 aa11.09□□□□□ -0.63
CACNA1A-236ENST00000637117 SPICE1Q8N0Z3 855 aa11.09□□□□□ -0.63
CACNA1A-236ENST00000637117 WNT2BQ93097 391 aa11.09□□□□□ -0.63
CACNA1A-236ENST00000637117 MMP19Q99542 508 aa11.09□□□□□ -0.63
CACNA1A-236ENST00000637117 TINF2Q9BSI4 451 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms