RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 SYNGAP1Q96PV0 1343 aa17.69■□□□□ 0.42
CACNA1A-230ENST00000636768 TRIOBPQ9H2D6 2365 aa17.68■□□□□ 0.42
CACNA1A-230ENST00000636768 ZNF865P0CJ78 1059 aaPredicted RBP17.68■□□□□ 0.42
CACNA1A-230ENST00000636768 ALAS1P13196 640 aa17.68■□□□□ 0.42
CACNA1A-230ENST00000636768 SNAP25P60880 206 aa17.68■□□□□ 0.42
CACNA1A-230ENST00000636768 TKFCQ3LXA3 575 aa17.68■□□□□ 0.42
CACNA1A-230ENST00000636768 ZNF467Q7Z7K2 595 aaPredicted RBP17.68■□□□□ 0.42
CACNA1A-230ENST00000636768 ESR2Q92731 530 aa17.68■□□□□ 0.42
CACNA1A-230ENST00000636768 GDF15Q99988 308 aa17.68■□□□□ 0.42
CACNA1A-230ENST00000636768 NEDD4P46934 1319 aa17.68■□□□□ 0.42
CACNA1A-230ENST00000636768 PGK1P00558 417 aa17.67■□□□□ 0.42
CACNA1A-230ENST00000636768 PDE4AP27815 886 aa17.67■□□□□ 0.42
CACNA1A-230ENST00000636768 MAGEA10P43363 369 aaPredicted RBP17.67■□□□□ 0.42
CACNA1A-230ENST00000636768 MAMDC4Q6UXC1 1216 aa17.67■□□□□ 0.42
CACNA1A-230ENST00000636768 RNF180Q86T96 592 aa17.67■□□□□ 0.42
CACNA1A-230ENST00000636768 TRERF1Q96PN7 1200 aa17.67■□□□□ 0.42
CACNA1A-230ENST00000636768 CCPG1Q9ULG6 757 aa17.67■□□□□ 0.42
CACNA1A-230ENST00000636768 ATP11BQ9Y2G3 1177 aa17.67■□□□□ 0.42
CACNA1A-230ENST00000636768 ZNF536O15090 1300 aa17.67■□□□□ 0.42
CACNA1A-230ENST00000636768 FRMPD2Q68DX3 1309 aaPredicted RBP17.67■□□□□ 0.42
CACNA1A-230ENST00000636768 ALPK3Q96L96 1907 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 POTEB2H3BUK9 544 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 SNAI1O95863 264 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 SLC16A2P36021 539 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 ADCYAP1R1P41586 468 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 RTP1P59025 263 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 TTC22Q5TAA0 569 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 TTBK2Q6IQ55 1244 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 FERMT2Q96AC1 680 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 LENG1Q96BZ8 264 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 TTC14Q96N46 770 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 DSCC1Q9BVC3 393 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 GPCPD1Q9NPB8 672 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 A1CFQ9NQ94 594 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 PRKAG2Q9UGJ0 569 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 CTNNA3Q9UI47 895 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 FAM184BQ9ULE4 1060 aa17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 RANBP2P49792 3224 aaKnown RBP17.66■□□□□ 0.42
CACNA1A-230ENST00000636768 FRMPD3Q5JV73 1810 aa17.65■□□□□ 0.42
CACNA1A-230ENST00000636768 GSPT1P15170 499 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-230ENST00000636768 BMP8BP34820 402 aa17.65■□□□□ 0.42
CACNA1A-230ENST00000636768 CNTN2Q02246 1040 aa17.65■□□□□ 0.42
CACNA1A-230ENST00000636768 IMMTQ16891 758 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-230ENST00000636768 SYDE2Q5VT97 1194 aa17.65■□□□□ 0.42
CACNA1A-230ENST00000636768 SLC39A5Q6ZMH5 540 aa17.65■□□□□ 0.42
CACNA1A-230ENST00000636768 ARMCX2Q7L311 632 aa17.65■□□□□ 0.42
CACNA1A-230ENST00000636768 FGD4Q96M96 766 aa17.65■□□□□ 0.42
CACNA1A-230ENST00000636768 ZKSCAN3Q9BRR0 538 aa17.65■□□□□ 0.42
CACNA1A-230ENST00000636768 UBE2OQ9C0C9 1292 aaKnown RBP17.65■□□□□ 0.42
CACNA1A-230ENST00000636768 KDM4AO75164 1064 aa17.64■□□□□ 0.41
CACNA1A-230ENST00000636768 ICAM1P05362 532 aa17.64■□□□□ 0.41
CACNA1A-230ENST00000636768 PDHBP11177 359 aa17.64■□□□□ 0.41
CACNA1A-230ENST00000636768 NT5C2P49902 561 aa17.64■□□□□ 0.41
CACNA1A-230ENST00000636768 ACVR2BQ13705 512 aa17.64■□□□□ 0.41
CACNA1A-230ENST00000636768 BTNL9Q6UXG8 535 aa17.64■□□□□ 0.41
CACNA1A-230ENST00000636768 IQCA1Q86XH1 822 aa17.64■□□□□ 0.41
CACNA1A-230ENST00000636768 RANBP17Q9H2T7 1088 aaKnown RBP17.64■□□□□ 0.41
CACNA1A-230ENST00000636768 ABHD16BQ9H3Z7 469 aa17.64■□□□□ 0.41
CACNA1A-230ENST00000636768 PCDH10Q9P2E7 1040 aa17.64■□□□□ 0.41
CACNA1A-230ENST00000636768 PHF24Q9UPV7 400 aa17.64■□□□□ 0.41
CACNA1A-230ENST00000636768 MDM2Q00987 491 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-230ENST00000636768 TRIM60Q495X7 471 aa17.63■□□□□ 0.41
CACNA1A-230ENST00000636768 CCDC178Q5BJE1 867 aa17.63■□□□□ 0.41
CACNA1A-230ENST00000636768 MUM1L1Q5H9M0 696 aa17.63■□□□□ 0.41
CACNA1A-230ENST00000636768 NSMFQ6X4W1 530 aa17.63■□□□□ 0.41
CACNA1A-230ENST00000636768 CCDC144CPQ8IYA2 1237 aa17.63■□□□□ 0.41
CACNA1A-230ENST00000636768 FAM133AQ8N9E0 248 aa17.63■□□□□ 0.41
CACNA1A-230ENST00000636768 LBHD1Q9BQE6 289 aaPredicted RBP17.63■□□□□ 0.41
CACNA1A-230ENST00000636768 SYNRGQ9UMZ2 1314 aa17.63■□□□□ 0.41
CACNA1A-230ENST00000636768 ASB14A6NK59 587 aa17.62■□□□□ 0.41
CACNA1A-230ENST00000636768 B4E1Z4 1266 aa17.62■□□□□ 0.41
CACNA1A-230ENST00000636768 ZNF543Q08ER8 600 aa17.62■□□□□ 0.41
CACNA1A-230ENST00000636768 CCDC144BQ3MJ40 725 aa17.62■□□□□ 0.41
CACNA1A-230ENST00000636768 DGKHQ86XP1 1220 aa17.62■□□□□ 0.41
CACNA1A-230ENST00000636768 RUFY2Q8WXA3 655 aa17.62■□□□□ 0.41
CACNA1A-230ENST00000636768 KAT14Q9H8E8 782 aa17.62■□□□□ 0.41
CACNA1A-230ENST00000636768 PRDM5Q9NQX1 630 aaPredicted RBP17.62■□□□□ 0.41
CACNA1A-230ENST00000636768 RAD50Q92878 1312 aa17.62■□□□□ 0.41
CACNA1A-230ENST00000636768 ADAMTS4O75173 837 aa17.61■□□□□ 0.41
CACNA1A-230ENST00000636768 DUSP11O75319 330 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-230ENST00000636768 SNX17Q15036 470 aa17.61■□□□□ 0.41
CACNA1A-230ENST00000636768 GPATCH4Q5T3I0 446 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-230ENST00000636768 TDHQ8IZJ6 230 aa17.61■□□□□ 0.41
CACNA1A-230ENST00000636768 KRT23Q9C075 422 aa17.61■□□□□ 0.41
CACNA1A-230ENST00000636768 IL25Q9H293 177 aa17.61■□□□□ 0.41
CACNA1A-230ENST00000636768 CNNM2Q9H8M5 875 aa17.61■□□□□ 0.41
CACNA1A-230ENST00000636768 SPC25Q9HBM1 224 aa17.61■□□□□ 0.41
CACNA1A-230ENST00000636768 CYP39A1Q9NYL5 469 aa17.61■□□□□ 0.41
CACNA1A-230ENST00000636768 A0A1W2PQ45 241 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-230ENST00000636768 A0A1W2PQY0 241 aa17.6■□□□□ 0.41
CACNA1A-230ENST00000636768 SOWAHBA6NEL2 793 aa17.6■□□□□ 0.41
CACNA1A-230ENST00000636768 C6orf222P0C671 652 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-230ENST00000636768 SNHG28P0DPA3 235 aa17.6■□□□□ 0.41
CACNA1A-230ENST00000636768 PNMA1Q8ND90 353 aa17.6■□□□□ 0.41
CACNA1A-230ENST00000636768 ZSCAN10Q96SZ4 725 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-230ENST00000636768 UBAC1Q9BSL1 405 aa17.6■□□□□ 0.41
CACNA1A-230ENST00000636768 TSEN34Q9BSV6 310 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-230ENST00000636768 PNMA2Q9UL42 364 aa17.6■□□□□ 0.41
CACNA1A-230ENST00000636768 PLXNA1Q9UIW2 1896 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms