RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 Q96M66 194 aa6.35□□□□□ -1.39
CLN5-212ENST00000636602 TRIT1Q9H3H1 467 aaKnown RBP6.35□□□□□ -1.39
CLN5-212ENST00000636602 EPB41L4AQ9HCS5 686 aaPredicted RBP6.35□□□□□ -1.39
CLN5-212ENST00000636602 DUSP13Q9UII6 198 aa6.35□□□□□ -1.39
CLN5-212ENST00000636602 POLR3KQ9Y2Y1 108 aaPredicted RBP6.35□□□□□ -1.39
CLN5-212ENST00000636602 CDK8P49336 464 aa6.34□□□□□ -1.39
CLN5-212ENST00000636602 ETF1P62495 437 aaKnown RBP6.34□□□□□ -1.39
CLN5-212ENST00000636602 PPP2R5EQ16537 467 aa6.34□□□□□ -1.39
CLN5-212ENST00000636602 WIPI1Q5MNZ9 446 aaPredicted RBP6.34□□□□□ -1.39
CLN5-212ENST00000636602 LARP1BQ659C4 914 aaKnown RBP6.34□□□□□ -1.39
CLN5-212ENST00000636602 FRMD5Q7Z6J6 570 aa6.34□□□□□ -1.39
CLN5-212ENST00000636602 LSRQ86X29 649 aaPredicted RBP6.34□□□□□ -1.39
CLN5-212ENST00000636602 SPPL2CQ8IUH8 684 aa6.34□□□□□ -1.39
CLN5-212ENST00000636602 CELF2-AS1Q8N7Q2 184 aa6.34□□□□□ -1.39
CLN5-212ENST00000636602 SHISA4Q96DD7 197 aa6.34□□□□□ -1.39
CLN5-212ENST00000636602 EHMT1Q9H9B1 1298 aa6.34□□□□□ -1.39
CLN5-212ENST00000636602 LUC7LQ9NQ29 371 aaKnown RBP6.34□□□□□ -1.39
CLN5-212ENST00000636602 ST7Q9NRC1 585 aa6.34□□□□□ -1.39
CLN5-212ENST00000636602 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.34□□□□□ -1.39
CLN5-212ENST00000636602 FAM221BA6H8Z2 402 aa6.33□□□□□ -1.4
CLN5-212ENST00000636602 OR14I1A6ND48 311 aa6.33□□□□□ -1.4
CLN5-212ENST00000636602 EPHB3P54753 998 aa6.33□□□□□ -1.4
CLN5-212ENST00000636602 SRSF3P84103 164 aaKnown RBP6.33□□□□□ -1.4
CLN5-212ENST00000636602 RASA3Q14644 834 aa6.33□□□□□ -1.4
CLN5-212ENST00000636602 TCEAL1Q15170 157 aa6.33□□□□□ -1.4
CLN5-212ENST00000636602 HDXQ7Z353 690 aa6.33□□□□□ -1.4
CLN5-212ENST00000636602 PLPPR2Q96GM1 343 aa6.33□□□□□ -1.4
CLN5-212ENST00000636602 GPR20Q99678 358 aa6.33□□□□□ -1.4
CLN5-212ENST00000636602 BDH2Q9BUT1 245 aa6.33□□□□□ -1.4
CLN5-212ENST00000636602 HRKO00198 91 aa6.32□□□□□ -1.4
CLN5-212ENST00000636602 CLSTN1O94985 981 aa6.32□□□□□ -1.4
CLN5-212ENST00000636602 ATE1O95260 518 aa6.32□□□□□ -1.4
CLN5-212ENST00000636602 CDK11BP21127 795 aaKnown RBP6.32□□□□□ -1.4
CLN5-212ENST00000636602 GALK1P51570 392 aa6.32□□□□□ -1.4
CLN5-212ENST00000636602 CHRNEQ04844 493 aa6.32□□□□□ -1.4
CLN5-212ENST00000636602 FXNQ16595 210 aa6.32□□□□□ -1.4
CLN5-212ENST00000636602 DDR2Q16832 855 aa6.32□□□□□ -1.4
CLN5-212ENST00000636602 EGFLAMQ63HQ2 1017 aa6.32□□□□□ -1.4
CLN5-212ENST00000636602 HHIPL2Q6UWX4 724 aa6.32□□□□□ -1.4
CLN5-212ENST00000636602 LRP10Q7Z4F1 713 aa6.32□□□□□ -1.4
CLN5-212ENST00000636602 RBBP8NLQ8NC74 664 aaPredicted RBP6.32□□□□□ -1.4
CLN5-212ENST00000636602 PPP1R13LQ8WUF5 828 aa6.32□□□□□ -1.4
CLN5-212ENST00000636602 SBNO2Q9Y2G9 1366 aa6.31□□□□□ -1.4
CLN5-212ENST00000636602 N4BP3O15049 544 aa6.31□□□□□ -1.4
CLN5-212ENST00000636602 HTR3BO95264 441 aa6.31□□□□□ -1.4
CLN5-212ENST00000636602 HSD3B2P26439 372 aa6.31□□□□□ -1.4
CLN5-212ENST00000636602 LRRFIP1Q32MZ4 808 aaKnown RBP6.31□□□□□ -1.4
CLN5-212ENST00000636602 RUFY4Q6ZNE9 571 aa6.31□□□□□ -1.4
CLN5-212ENST00000636602 TSPYL5Q86VY4 417 aaPredicted RBP6.31□□□□□ -1.4
CLN5-212ENST00000636602 SYTL4Q96C24 671 aaPredicted RBP6.31□□□□□ -1.4
CLN5-212ENST00000636602 RNPC3Q96LT9 517 aaKnown RBP6.31□□□□□ -1.4
CLN5-212ENST00000636602 GPR62Q9BZJ7 368 aa6.31□□□□□ -1.4
CLN5-212ENST00000636602 ANTXR1Q9H6X2 564 aa6.31□□□□□ -1.4
CLN5-212ENST00000636602 GPATCH2Q9NW75 528 aa6.31□□□□□ -1.4
CLN5-212ENST00000636602 SIRT5Q9NXA8 310 aa6.31□□□□□ -1.4
CLN5-212ENST00000636602 EBF1Q9UH73 591 aa6.31□□□□□ -1.4
CLN5-212ENST00000636602 GFRA2O00451 464 aa6.3□□□□□ -1.4
CLN5-212ENST00000636602 CASP7P55210 303 aa6.3□□□□□ -1.4
CLN5-212ENST00000636602 CHMP4BP1P59074 171 aa6.3□□□□□ -1.4
CLN5-212ENST00000636602 IFRD2Q12894 506 aaPredicted RBP6.3□□□□□ -1.4
CLN5-212ENST00000636602 MLECQ14165 292 aa6.3□□□□□ -1.4
CLN5-212ENST00000636602 ADGRF1Q5T601 910 aa6.3□□□□□ -1.4
CLN5-212ENST00000636602 ANKS4BQ8N8V4 417 aa6.3□□□□□ -1.4
CLN5-212ENST00000636602 DNAJC7Q99615 494 aa6.3□□□□□ -1.4
CLN5-212ENST00000636602 CCDC113Q9H0I3 377 aa6.3□□□□□ -1.4
CLN5-212ENST00000636602 MSRB2Q9Y3D2 182 aa6.3□□□□□ -1.4
CLN5-212ENST00000636602 PCDHA11Q9Y5I1 949 aa6.3□□□□□ -1.4
CLN5-212ENST00000636602 CORINQ9Y5Q5 1042 aa6.3□□□□□ -1.4
CLN5-212ENST00000636602 SNCAIPQ9Y6H5 919 aa6.3□□□□□ -1.4
CLN5-212ENST00000636602 IRS4O14654 1257 aaPredicted RBP6.29□□□□□ -1.4
CLN5-212ENST00000636602 PDPK1O15530 556 aa6.29□□□□□ -1.4
CLN5-212ENST00000636602 DDAH1O94760 285 aa6.29□□□□□ -1.4
CLN5-212ENST00000636602 LTKP29376 864 aa6.29□□□□□ -1.4
CLN5-212ENST00000636602 ETV3P41162 512 aa6.29□□□□□ -1.4
CLN5-212ENST00000636602 CNKSR3Q6P9H4 555 aa6.29□□□□□ -1.4
CLN5-212ENST00000636602 ANKRD13AQ8IZ07 590 aa6.29□□□□□ -1.4
CLN5-212ENST00000636602 C19orf47Q8N9M1 422 aaKnown RBP6.29□□□□□ -1.4
CLN5-212ENST00000636602 MICAL1Q8TDZ2 1067 aa6.29□□□□□ -1.4
CLN5-212ENST00000636602 TM9SF2Q99805 663 aa6.29□□□□□ -1.4
CLN5-212ENST00000636602 CNTD2Q9H8S5 307 aa6.29□□□□□ -1.4
CLN5-212ENST00000636602 REV1Q9UBZ9 1251 aa6.29□□□□□ -1.4
CLN5-212ENST00000636602 PRR36Q9H6K5 1346 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 A0A1W2PQH9 124 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 MEIS3P2A8K0S8 358 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 OVOL3O00110 214 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 ENPP3O14638 875 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 GJB6O95452 261 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 PLCG1P19174 1290 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 GUCY2CP25092 1073 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 ZXDAP98168 799 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 PDE4BQ07343 736 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 DUSP4Q13115 394 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 RASGRF1Q13972 1273 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 RTP5Q14D33 572 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 SIRT2Q8IXJ6 389 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 TMEFF1Q8IYR6 380 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 LINC01356Q8N9X3 169 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 SH3TC2Q8TF17 1288 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 GMIPQ9P107 970 aa6.28□□□□□ -1.4
CLN5-212ENST00000636602 PRICKLE3O43900 615 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms